Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01063 ATGGGTTCCAAAGCACTGTGTTTTTTCTTCTTTCTTTCCTTTGTGGCTGTTTCTTTCAGGTATGCTTCAGCACAGGATGAGGAAGACAATGGTCTTGTCATGAATTTTTACAAAGATACATGTCCCCAAGCTGAAGATATCATCAAAGAACAAGTTAGGCTTCTCTACAAGCGCCATAAGAACACTGCATTCTCTTGGCTCAGAAACATTTTCCATGACTGTGCTGTTCAATCCTGTGATGCCTCTCTGCTACTGGATTCAACAAGAAGAACCCTTTCAGAGAAGGAAACAGACAGAAGCTTTGGACTTAGGAACTTCCGGTATATTGAGACCATTAAAGAGGCGGTGGAAAGAGAATGTCCTGGAGTGGTCTCCTGTGCAGATATCCTTGTTCTGTCAGCCAGAGATGGCATTGTTTCTCTTGGGGGACCTTACATCCCACTTAAAACAGGCAGAAGAGATGGAAGGAAAAGCAGAGCTGATATTTTGGAAGAGTATCTTCCAGACCACAATGAAAGCATGTCTGTGGTTCTTGAAAGATTTGGTGCCATGGGTATTGACACCCCTGGAGTGGTTGCTTTACTAGGAGCTCATAGTGTTGGTAGAACACACTGTGTGAAGCTGGTGCACCGGCTGTACCCACAAGTAGACCCTGAGCTGAACCCTGGCCATGTAGAGCACATGTTGTACAAGTGTCCTGATGAGATCCCAGACCCCAAGGCTGTACAGTACGTGAGAAATGATCGTGGTACACCTATGATTCTGGACAACAACTACTATAGAAACATACTTGACAACAAAGGACTGCTGATTGTGGATCACCAACTAGCCGCAGACAAGAGAACAAAGCCATATGTGAAGAAAATGGCCAAAAAGCAAGACTATTTCTTCAAGGAATTCTCAAGAGCCATTACCATCCTTTCTGAGAACAACCCTCTCACTGGCACAAAGGGTGAAATCAGGAAGCAGTGTAATGTTGCCAACAAGCTGCACTGA 996 44.58 MGSKALCFFFFLSFVAVSFRYASAQDEEDNGLVMNFYKDTCPQAEDIIKEQVRLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRTLSEKETDRSFGLRNFRYIETIKEAVERECPGVVSCADILVLSARDGIVSLGGPYIPLKTGRRDGRKSRADILEEYLPDHNESMSVVLERFGAMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPQVDPELNPGHVEHMLYKCPDEIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLAADKRTKPYVKKMAKKQDYFFKEFSRAITILSENNPLTGTKGEIRKQCNVANKLH* 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 15779580 15781093 - Chy12G216630.1 Chy12g01063 238844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01063 331 PANTHER PEROXIDASE 42 20 327 - -
Chy12g01063 331 SUPERFAMILY Heme-dependent peroxidases 32 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy12g01063 331 Gene3D - 35 328 - -
Chy12g01063 331 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g01063 331 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g01063 331 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g01063 331 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g01063 331 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g01063 331 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01063 331 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01063 331 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01063 331 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01063 331 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01063 331 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01063 331 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01063 331 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01063 331 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01063 331 ProSiteProfiles Plant heme peroxidase family profile. 31 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g01063 331 PANTHER PEROXIDASE 25-RELATED 20 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01063 331 CDD secretory_peroxidase 31 326 IPR033905 GO:0004601|GO:0042744
Chy12g01063 331 Gene3D Peroxidase, domain 2 168 307 - -
Chy12g01063 331 Pfam Peroxidase 49 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g02078 Chy-Chr4:26222264 Chy12g01063 Chy-Chr12:15779580 6.91E-70 dispersed
Chy12g01063 Chy-Chr12:15779580 Chy03g00105 Chy-Chr3:1034316 1.11E-63 dispersed
Chy12g01063 Chy-Chr12:15779580 Chy02g00611 Chy-Chr2:3712025 1.65E-62 transposed
Chy12g01063 Chy-Chr12:15779580 Chy07g01260 Chy-Chr7:17305002 2.01E-62 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01063 K00430 - csv:101214168 654.825