Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01065 ATGTCTTGTTCGAATCTGACTATGTGGGTGTCTTCAAAACCCACCGTTTCTGATGCATCCTCCCTGTCTTTCCGCTCATTTTTGAGCCCTTTTCAACTTCCTTCCCAGAATTCAACCCCTGCTCGATCATGGTCAGTTACTCCAATCCATTGCGGTCTTCGGGAACTCCGAGACCGTATCGATTCGGTGAAGAACACCCAGAAGATCACTGAAGCTATGAAGCTTGTTGCTGCTGCTAAAGTCCGTAGAGCTCAAGAAGCTGTTGTTAATGGAAGACCCTTCTCTGAAGCCTTAGTTGAAGTCCTTTACAACATCAATGAGCAACTTCAAACAGAAGACGTTGATGTTCCTTTAACCAAAGTAAGACCTGTTAAGAAAGTTGCATTAGTTGTTGTCACCGGTGATAGAGGTCTTTGTGGTGGTTTCAACAATAACATCATTAAGAAAGCTGAAGCTAGAATATCAGAATTGAAGGCACTTGGTCTTGATTACACTGTCATTAGTGTTGGAAAGAAGGGTAATTCTTATTTCCTTCGCCGACCGTACATTCCTGTCGATAAGTTCCTTGAAGGTGGTACTCTTCCCACTGCTAAAGAAGCTCAAGCGATAGCTGATGATGTTTTTTCACTCTTTGTTAGTGAGGAAGTTGATAAAGTAGAGCTTTTGTATACGAAATTCGTGTCATTGGTAAAATCTGATCCTGTAATTCATACTCTTCTTCCTCTATCACCAAAAGGTGAGATCTGTGATATAAATGGAGTCTGTGTAGATGCTGCAGAAGATGAGTTTTTCAGGTTGACAACAAAGGAAGGGAAATTGACAGTAGAAAGGGATTCAGTGAGGACAAGCACATCAGATTTTTCACCAATTTTGGAGTTTGAGCAAGACCCAGTTCAGATCTTGGATGCTTTATTGCCTTTGTATTTGAACAGCCAGATTTTGAGGGCATTGCAAGAGTCATTGGCCAGTGAACTTGCTGCTAGAATGAGTGCTATGAGTAATGCAACCGATAATGCTTCTGAGCTGAAGAGAACTCTGTCTATTGTGTATAATAGACAGCGCCAAGCTAAGATTACTGGAGAAATCTTGGAGATTGTTGCTGGTGCTAATGCCTTGACTTAA 1122 41.62 MSCSNLTMWVSSKPTVSDASSLSFRSFLSPFQLPSQNSTPARSWSVTPIHCGLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVPLTKVRPVKKVALVVVTGDRGLCGGFNNNIIKKAEARISELKALGLDYTVISVGKKGNSYFLRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQAKITGEILEIVAGANALT* 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 15792888 15794009 + Chy12G216650.1 Chy12g01065 238846

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01065 373 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 52 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Chy12g01065 373 Gene3D ATP synthase, gamma subunit, helix hairpin domain 269 372 - -
Chy12g01065 373 Hamap ATP synthase gamma chain [atpG]. 50 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Chy12g01065 373 Gene3D ATP synthase, gamma subunit, helix hairpin domain 52 119 - -
Chy12g01065 373 Gene3D - 120 243 - -
Chy12g01065 373 Pfam ATP synthase 53 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Chy12g01065 373 PANTHER ATP SYNTHASE GAMMA CHAIN 1 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Chy12g01065 373 PRINTS ATP synthase gamma subunit signature 319 338 IPR000131 GO:0015986|GO:0045261|GO:0046933
Chy12g01065 373 PRINTS ATP synthase gamma subunit signature 124 143 IPR000131 GO:0015986|GO:0045261|GO:0046933
Chy12g01065 373 PRINTS ATP synthase gamma subunit signature 350 371 IPR000131 GO:0015986|GO:0045261|GO:0046933
Chy12g01065 373 PRINTS ATP synthase gamma subunit signature 217 234 IPR000131 GO:0015986|GO:0045261|GO:0046933
Chy12g01065 373 CDD F1-ATPase_gamma 53 369 IPR000131 GO:0015986|GO:0045261|GO:0046933
Chy12g01065 373 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 52 372 IPR035968 GO:0015986|GO:0045261|GO:0046933
Chy12g01065 373 ProSitePatterns ATP synthase gamma subunit signature. 358 371 IPR023632 -
Chy12g01065 373 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 1 372 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01065 K02115 ATPF1G, atpG; F-type H+-transporting ATPase subunit gamma - csv:101214408 685.641
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01816 Chy-Chr6:21860343 Chy12g01065 Chy-Chr12:15792888 6.37E-156 dispersed
Chy12g01502 Chy-Chr12:18836503 Chy12g01065 Chy-Chr12:15792888 5.89E-26 transposed
Chy12g01065 Chy-Chr12:15792888 Chy02g00399 Chy-Chr2:2536085 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi10g86 . . . Bda09g01616 . . . . Cmo13g00771 . . . . . Sed10g0607 . Cpe10g00784 Bhi03g00577 Tan03g2312 Cmetu04g1298 . Hepe04g1768 . . . . . . . . . Cone6ag0055 Cone9ag0067 . . Lsi01g00426 Csa06g03519 Chy12g01065 Cme08g00402 . . . . . . . . Sed08g2366 Cmo03g00560 . Cma13g00740 . Car13g00599 . . Cpe20g00363 Bhi08g01833 Tan05g3088 Cmetu12g1125 Lac10g0684 Hepe07g1109 . . Cla03g00441 Cam03g0466 Cec03g0453 Cco03g0463 Clacu03g0464 Cmu03g1071 Cre03g0757 . Csa01g01075 . Cme12g01491
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Chy05g00612 . 7 990 Primary Pumps ATPases AT1G13210 73.4 0.0e+00 1442.6
Chy01g02193 . 50 1250 Primary Pumps ATPases AT1G13210 55.0 0.0e+00 1281.5
Chy01g02194 . 12 1212 Primary Pumps ATPases AT1G13210 55.0 0.0e+00 1281.5
Chy12g01464 . 1 218 Primary Pumps ATPases AT1G13210 69.5 3.4e-85 313.9
Chy10g01100 . 5 143 Primary Pumps ATPases AT1G13210 59.7 1.5e-43 175.6
Chy01g02193 . 44 1263 Primary Pumps ATPases AT1G17500 74.2 0.0e+00 1793.9
Chy01g02194 . 6 1225 Primary Pumps ATPases AT1G17500 74.2 0.0e+00 1793.9
Chy05g00612 . 1 990 Primary Pumps ATPases AT1G17500 57.8 0.0e+00 1149.4
Chy12g01464 . 1 209 Primary Pumps ATPases AT1G17500 60.8 1.9e-67 255.0
Chy05g00612 . 7 990 Primary Pumps ATPases AT1G26130 74.4 0.0e+00 1491.5
Chy01g02193 . 50 1215 Primary Pumps ATPases AT1G26130 55.5 0.0e+00 1272.7
Chy01g02194 . 12 1177 Primary Pumps ATPases AT1G26130 55.5 0.0e+00 1272.7
Chy12g01464 . 1 215 Primary Pumps ATPases AT1G26130 67.0 1.2e-82 305.4
Chy10g01100 . 5 144 Primary Pumps ATPases AT1G26130 67.1 1.6e-47 188.7
Chy01g02193 . 44 1265 Primary Pumps ATPases AT1G54280 73.5 0.0e+00 1772.3
Chy01g02194 . 6 1227 Primary Pumps ATPases AT1G54280 73.5 0.0e+00 1772.3
Chy05g00612 . 9 990 Primary Pumps ATPases AT1G54280 58.2 0.0e+00 1144.4
Chy12g01464 . 1 209 Primary Pumps ATPases AT1G54280 65.6 5.1e-76 283.5
Chy10g00952 . 11 1225 Primary Pumps ATPases AT1G59820 78.8 0.0e+00 1936.4
Chy05g00612 . 3 990 Primary Pumps ATPases AT1G68710 74.7 0.0e+00 1494.6
Chy01g02193 . 50 1253 Primary Pumps ATPases AT1G68710 54.9 0.0e+00 1292.7
Chy01g02194 . 12 1215 Primary Pumps ATPases AT1G68710 54.9 0.0e+00 1292.7
Chy12g01464 . 1 215 Primary Pumps ATPases AT1G68710 67.9 9.5e-83 305.8
Chy10g01100 . 1 144 Primary Pumps ATPases AT1G68710 67.3 8.7e-52 203.0
Chy01g02193 . 44 1263 Primary Pumps ATPases AT1G72700 73.1 0.0e+00 1770.4
Chy01g02194 . 6 1225 Primary Pumps ATPases AT1G72700 73.1 0.0e+00 1770.4
Chy05g00612 . 1 990 Primary Pumps ATPases AT1G72700 57.8 0.0e+00 1144.4
Chy12g01464 . 1 209 Primary Pumps ATPases AT1G72700 63.6 1.1e-70 265.8
Chy01g02193 . 44 973 Primary Pumps ATPases AT3G13900 72.0 0.0e+00 1322.8
Chy01g02194 . 6 935 Primary Pumps ATPases AT3G13900 72.0 0.0e+00 1322.8
Chy05g00612 . 9 895 Primary Pumps ATPases AT3G13900 57.6 3.3e-299 1024.6
Chy12g01464 . 1 209 Primary Pumps ATPases AT3G13900 66.0 1.4e-76 285.0
Chy05g00612 . 7 990 Primary Pumps ATPases AT3G25610 73.7 0.0e+00 1463.4
Chy01g02193 . 50 1251 Primary Pumps ATPases AT3G25610 55.8 0.0e+00 1297.3
Chy01g02194 . 12 1213 Primary Pumps ATPases AT3G25610 55.8 0.0e+00 1297.3
Chy12g01464 . 1 219 Primary Pumps ATPases AT3G25610 65.6 1.1e-83 308.9
Chy10g01100 . 5 143 Primary Pumps ATPases AT3G25610 67.6 5.2e-49 193.7
Chy05g00612 . 194 990 Primary Pumps ATPases AT3G27870 67.1 0.0e+00 1079.7
Chy01g02193 . 240 1261 Primary Pumps ATPases AT3G27870 53.4 4.1e-310 1060.8
Chy01g02194 . 202 1223 Primary Pumps ATPases AT3G27870 53.4 4.1e-310 1060.8
Chy12g01464 . 75 219 Primary Pumps ATPases AT3G27870 63.7 6.6e-50 196.4
Chy03g00455 . 133 861 Primary Pumps ATPases AT5G04930 60.2 1.7e-270 929.5
Chy01g00320 . 1 1104 Primary Pumps ATPases AT5G44240 83.6 0.0e+00 1877.4
Chy07g00189 . 1 1019 Primary Pumps ATPases AT1G27770 80.9 0.0e+00 1627.1
Chy04g01604 . 1 1011 Primary Pumps ATPases AT1G27770 63.6 0.0e+00 1245.0
Chy07g00189 . 1 1017 Primary Pumps ATPases AT4G37640 77.8 0.0e+00 1573.5
Chy04g01604 . 1 1011 Primary Pumps ATPases AT4G37640 63.3 0.0e+00 1248.8
Chy04g01604 . 57 1030 Primary Pumps ATPases AT3G57330 71.7 0.0e+00 1370.1
Chy07g00189 . 60 1019 Primary Pumps ATPases AT3G57330 63.0 0.0e+00 1178.7
Chy04g01604 . 104 1030 Primary Pumps ATPases AT2G41560 72.2 0.0e+00 1323.9
Chy07g00189 . 111 1019 Primary Pumps ATPases AT2G41560 64.1 0.0e+00 1142.9
Chy01g02112 . 13 1073 Primary Pumps ATPases AT5G57110 68.8 0.0e+00 1421.8
Chy05g00853 . 1 889 Primary Pumps ATPases AT5G57110 74.0 0.0e+00 1269.6
Chy01g01544 . 74 1011 Primary Pumps ATPases AT5G57110 54.7 5.1e-290 994.2
Chy05g01188 . 1 551 Primary Pumps ATPases AT5G57110 54.8 6.4e-160 562.0
Chy05g00854 . 2 187 Primary Pumps ATPases AT5G57110 52.1 2.6e-44 177.9
Chy01g02112 . 6 1090 Primary Pumps ATPases AT3G21180 74.2 0.0e+00 1552.3
Chy05g00853 . 1 900 Primary Pumps ATPases AT3G21180 70.5 0.0e+00 1218.0
Chy01g01544 . 72 1011 Primary Pumps ATPases AT3G21180 55.5 1.6e-283 972.6
Chy05g01188 . 22 549 Primary Pumps ATPases AT3G21180 54.8 3.1e-154 543.1
Chy05g00854 . 13 187 Primary Pumps ATPases AT3G21180 51.1 1.1e-42 172.6
Chy01g02112 . 15 1090 Primary Pumps ATPases AT4G29900 69.9 0.0e+00 1436.8
Chy05g00853 . 1 889 Primary Pumps ATPases AT4G29900 72.6 0.0e+00 1246.9
Chy01g01544 . 73 1011 Primary Pumps ATPases AT4G29900 55.7 4.4e-294 1007.7
Chy04g01604 . 21 1011 Primary Pumps ATPases AT4G29900 50.1 1.7e-253 872.8
Chy05g01188 . 1 549 Primary Pumps ATPases AT4G29900 53.9 1.6e-158 557.4
Chy05g00854 . 10 188 Primary Pumps ATPases AT4G29900 58.7 7.6e-52 203.0
Chy01g01544 . 9 1011 Primary Pumps ATPases AT3G63380 67.3 0.0e+00 1309.7
Chy01g02112 . 132 1088 Primary Pumps ATPases AT3G63380 54.8 1.5e-283 972.6
Chy05g00853 . 1 890 Primary Pumps ATPases AT3G63380 54.3 3.5e-256 881.7
Chy05g01188 . 1 554 Primary Pumps ATPases AT3G63380 65.3 5.7e-206 714.9
Chy01g01544 . 16 1012 Primary Pumps ATPases AT3G22910 64.5 0.0e+00 1247.6
Chy01g02112 . 131 1075 Primary Pumps ATPases AT3G22910 55.8 2.2e-282 968.8
Chy05g00853 . 1 890 Primary Pumps ATPases AT3G22910 55.1 5.2e-260 894.4
Chy05g01188 . 1 554 Primary Pumps ATPases AT3G22910 66.8 1.2e-208 723.8
Chy05g00612 . 7 990 Primary Pumps ATPases AT1G13210 73.4 0.0e+00 1442.6
Chy01g02193 . 50 1250 Primary Pumps ATPases AT1G13210 55.0 0.0e+00 1281.5
Chy01g02194 . 12 1212 Primary Pumps ATPases AT1G13210 55.0 0.0e+00 1281.5
Chy12g01464 . 1 218 Primary Pumps ATPases AT1G13210 69.5 3.4e-85 313.9
Chy10g01100 . 5 143 Primary Pumps ATPases AT1G13210 59.7 1.5e-43 175.6
Chy07g01591 . 3 922 Primary Pumps ATPases AT1G80660 86.2 0.0e+00 1586.6
Chy05g00892 . 1 928 Primary Pumps ATPases AT1G80660 83.4 0.0e+00 1555.4
Chy05g01254 CCT 5 918 Primary Pumps ATPases AT1G80660 85.0 0.0e+00 1554.3
Chy02g02093 CCT 3 919 Primary Pumps ATPases AT1G80660 83.8 0.0e+00 1553.5
Chy03g01190 CCT 1 924 Primary Pumps ATPases AT1G80660 83.5 0.0e+00 1552.0
Chy02g02238 . 1 927 Primary Pumps ATPases AT1G80660 81.9 0.0e+00 1531.9
Chy04g00299 CCT 10 923 Primary Pumps ATPases AT1G80660 80.9 0.0e+00 1478.8
Chy12g01318 CCT,ECH 2 931 Primary Pumps ATPases AT1G80660 79.3 0.0e+00 1463.0
Chy02g02522 CCT,ECH 5 930 Primary Pumps ATPases AT1G80660 79.4 0.0e+00 1458.4
Chy09g00272 . 2 945 Primary Pumps ATPases AT1G80660 77.0 0.0e+00 1444.1
Chy02g02522 CCT,ECH 9 960 Primary Pumps ATPases AT3G60330 76.0 0.0e+00 1427.9
Chy09g00272 . 6 975 Primary Pumps ATPases AT3G60330 74.3 0.0e+00 1409.8
Chy12g01318 CCT,ECH 6 990 Primary Pumps ATPases AT3G60330 73.0 0.0e+00 1406.3
Chy02g02093 CCT 1 949 Primary Pumps ATPases AT3G60330 73.5 0.0e+00 1367.4
Chy05g00892 . 9 955 Primary Pumps ATPases AT3G60330 73.4 0.0e+00 1365.9
Chy02g02238 . 6 954 Primary Pumps ATPases AT3G60330 72.4 0.0e+00 1357.4
Chy03g01190 CCT 10 992 Primary Pumps ATPases AT3G60330 70.8 0.0e+00 1357.4
Chy07g01591 . 1 952 Primary Pumps ATPases AT3G60330 72.3 0.0e+00 1352.8
Chy04g00299 CCT 7 953 Primary Pumps ATPases AT3G60330 71.5 0.0e+00 1339.3
Chy05g01254 CCT 1 919 Primary Pumps ATPases AT3G60330 72.9 0.0e+00 1327.0
Chy02g02522 CCT,ECH 5 960 Primary Pumps ATPases AT5G62670 91.4 0.0e+00 1721.4
Chy12g01318 CCT,ECH 1 999 Primary Pumps ATPases AT5G62670 88.6 0.0e+00 1710.3
Chy09g00272 . 1 975 Primary Pumps ATPases AT5G62670 88.3 0.0e+00 1688.7
Chy05g00892 . 9 955 Primary Pumps ATPases AT5G62670 82.0 0.0e+00 1521.9
Chy03g01190 CCT 3 992 Primary Pumps ATPases AT5G62670 79.3 0.0e+00 1515.0
Chy07g01591 . 6 952 Primary Pumps ATPases AT5G62670 81.1 0.0e+00 1513.8
Chy02g02238 . 7 954 Primary Pumps ATPases AT5G62670 81.0 0.0e+00 1510.4
Chy02g02093 CCT 1 949 Primary Pumps ATPases AT5G62670 80.1 0.0e+00 1500.0
Chy05g01254 CCT 6 919 Primary Pumps ATPases AT5G62670 79.8 0.0e+00 1451.8
Chy04g00299 CCT 7 953 Primary Pumps ATPases AT5G62670 78.7 0.0e+00 1449.9
Chy05g00892 . 10 955 Primary Pumps ATPases AT1G17260 72.6 0.0e+00 1351.7
Chy02g02238 . 5 954 Primary Pumps ATPases AT1G17260 71.5 0.0e+00 1338.6
Chy07g01591 . 12 952 Primary Pumps ATPases AT1G17260 71.5 0.0e+00 1323.9
Chy03g01190 CCT 4 992 Primary Pumps ATPases AT1G17260 68.8 0.0e+00 1318.9
Chy02g02093 CCT 7 949 Primary Pumps ATPases AT1G17260 71.0 0.0e+00 1312.4
Chy02g02522 CCT,ECH 1 960 Primary Pumps ATPases AT1G17260 70.2 0.0e+00 1307.7
Chy12g01318 CCT,ECH 13 999 Primary Pumps ATPases AT1G17260 69.2 0.0e+00 1304.3
Chy04g00299 CCT 14 953 Primary Pumps ATPases AT1G17260 70.7 0.0e+00 1303.5
Chy09g00272 . 13 975 Primary Pumps ATPases AT1G17260 69.9 0.0e+00 1302.3
Chy05g01254 CCT 7 919 Primary Pumps ATPases AT1G17260 71.9 0.0e+00 1288.1
Chy02g02522 CCT,ECH 9 960 Primary Pumps ATPases AT3G47950 91.7 0.0e+00 1717.6
Chy12g01318 CCT,ECH 6 999 Primary Pumps ATPases AT3G47950 88.7 0.0e+00 1705.3
Chy09g00272 . 3 975 Primary Pumps ATPases AT3G47950 88.1 0.0e+00 1679.1
Chy07g01591 . 6 952 Primary Pumps ATPases AT3G47950 80.9 0.0e+00 1513.4
Chy05g00892 . 9 955 Primary Pumps ATPases AT3G47950 81.3 0.0e+00 1512.3
Chy02g02238 . 7 954 Primary Pumps ATPases AT3G47950 80.7 0.0e+00 1509.2
Chy02g02093 CCT 6 949 Primary Pumps ATPases AT3G47950 80.5 0.0e+00 1500.3
Chy03g01190 CCT 10 992 Primary Pumps ATPases AT3G47950 78.6 0.0e+00 1500.0
Chy04g00299 CCT 7 953 Primary Pumps ATPases AT3G47950 78.6 0.0e+00 1452.6
Chy05g01254 CCT 6 919 Primary Pumps ATPases AT3G47950 79.5 0.0e+00 1447.2
Chy05g00892 . 267 955 Primary Pumps ATPases AT2G24520 86.1 0.0e+00 1182.5
Chy02g02238 . 265 954 Primary Pumps ATPases AT2G24520 85.4 0.0e+00 1181.8
Chy03g01190 CCT 268 992 Primary Pumps ATPases AT2G24520 83.0 0.0e+00 1175.6
Chy07g01591 . 264 952 Primary Pumps ATPases AT2G24520 80.4 0.0e+00 1116.3
Chy04g00299 CCT 265 953 Primary Pumps ATPases AT2G24520 82.0 0.0e+00 1112.8
Chy02g02093 CCT 264 949 Primary Pumps ATPases AT2G24520 80.4 0.0e+00 1103.6
Chy02g02522 CCT,ECH 269 960 Primary Pumps ATPases AT2G24520 78.9 4.6e-313 1070.1
Chy09g00272 . 284 975 Primary Pumps ATPases AT2G24520 78.4 4.6e-313 1070.1
Chy12g01318 CCT,ECH 272 999 Primary Pumps ATPases AT2G24520 74.8 3.8e-307 1050.4
Chy05g01254 CCT 264 921 Primary Pumps ATPases AT2G24520 78.8 1.5e-303 1038.5
Chy05g00892 . 6 955 Primary Pumps ATPases AT5G57350 86.9 0.0e+00 1629.0
Chy02g02238 . 6 954 Primary Pumps ATPases AT5G57350 84.7 0.0e+00 1604.7
Chy03g01190 CCT 7 992 Primary Pumps ATPases AT5G57350 81.2 0.0e+00 1581.6
Chy07g01591 . 5 952 Primary Pumps ATPases AT5G57350 82.4 0.0e+00 1573.9
Chy02g02093 CCT 5 949 Primary Pumps ATPases AT5G57350 82.8 0.0e+00 1566.2
Chy05g01254 CCT 5 919 Primary Pumps ATPases AT5G57350 83.0 0.0e+00 1529.6
Chy04g00299 CCT 7 953 Primary Pumps ATPases AT5G57350 80.4 0.0e+00 1517.7
Chy02g02522 CCT,ECH 11 960 Primary Pumps ATPases AT5G57350 79.3 0.0e+00 1500.0
Chy09g00272 . 8 975 Primary Pumps ATPases AT5G57350 77.9 0.0e+00 1493.4
Chy12g01318 CCT,ECH 8 999 Primary Pumps ATPases AT5G57350 76.2 0.0e+00 1482.6
Chy05g00892 . 8 955 Primary Pumps ATPases AT4G30190 85.7 0.0e+00 1637.5
Chy02g02238 . 6 954 Primary Pumps ATPases AT4G30190 83.7 0.0e+00 1598.9
Chy03g01190 CCT 9 992 Primary Pumps ATPases AT4G30190 80.1 0.0e+00 1576.2
Chy07g01591 . 5 952 Primary Pumps ATPases AT4G30190 81.4 0.0e+00 1567.4
Chy02g02093 CCT 5 949 Primary Pumps ATPases AT4G30190 81.7 0.0e+00 1566.2
Chy05g01254 CCT 5 919 Primary Pumps ATPases AT4G30190 81.4 0.0e+00 1511.9
Chy04g00299 CCT 6 953 Primary Pumps ATPases AT4G30190 78.7 0.0e+00 1509.2
Chy02g02522 CCT,ECH 11 960 Primary Pumps ATPases AT4G30190 78.3 0.0e+00 1480.7
Chy09g00272 . 8 975 Primary Pumps ATPases AT4G30190 76.6 0.0e+00 1476.1
Chy12g01318 CCT,ECH 8 999 Primary Pumps ATPases AT4G30190 74.9 0.0e+00 1461.4
Chy02g02093 CCT 3 949 Primary Pumps ATPases AT3G42640 85.9 0.0e+00 1619.0
Chy07g01591 . 2 952 Primary Pumps ATPases AT3G42640 84.5 0.0e+00 1598.2
Chy05g00892 . 5 955 Primary Pumps ATPases AT3G42640 83.8 0.0e+00 1581.2
Chy05g01254 CCT 2 919 Primary Pumps ATPases AT3G42640 85.9 0.0e+00 1572.0
Chy02g02238 . 1 954 Primary Pumps ATPases AT3G42640 82.1 0.0e+00 1557.0
Chy03g01190 CCT 11 992 Primary Pumps ATPases AT3G42640 81.0 0.0e+00 1556.6
Chy04g00299 CCT 1 953 Primary Pumps ATPases AT3G42640 79.6 0.0e+00 1510.7
Chy02g02522 CCT,ECH 14 960 Primary Pumps ATPases AT3G42640 79.5 0.0e+00 1490.3
Chy09g00272 . 11 975 Primary Pumps ATPases AT3G42640 78.5 0.0e+00 1490.3
Chy12g01318 CCT,ECH 11 999 Primary Pumps ATPases AT3G42640 76.4 0.0e+00 1469.1
Chy05g00892 . 70 955 Primary Pumps ATPases AT2G18960 87.8 0.0e+00 1536.5
Chy02g02238 . 68 954 Primary Pumps ATPases AT2G18960 86.2 0.0e+00 1508.0
Chy03g01190 CCT 71 992 Primary Pumps ATPases AT2G18960 83.3 0.0e+00 1504.6
Chy07g01591 . 67 952 Primary Pumps ATPases AT2G18960 84.5 0.0e+00 1493.8
Chy02g02093 CCT 67 949 Primary Pumps ATPases AT2G18960 83.6 0.0e+00 1471.8
Chy04g00299 CCT 68 953 Primary Pumps ATPases AT2G18960 82.1 0.0e+00 1434.1
Chy05g01254 CCT 67 919 Primary Pumps ATPases AT2G18960 83.9 0.0e+00 1417.1
Chy09g00272 . 69 975 Primary Pumps ATPases AT2G18960 79.1 0.0e+00 1408.3
Chy02g02522 CCT,ECH 72 960 Primary Pumps ATPases AT2G18960 80.4 0.0e+00 1407.9
Chy12g01318 CCT,ECH 69 999 Primary Pumps ATPases AT2G18960 76.7 0.0e+00 1387.9
Chy07g01591 . 3 952 Primary Pumps ATPases AT2G07560 85.6 0.0e+00 1617.4
Chy02g02093 CCT 3 949 Primary Pumps ATPases AT2G07560 84.5 0.0e+00 1598.2
Chy05g00892 . 7 955 Primary Pumps ATPases AT2G07560 83.5 0.0e+00 1581.6
Chy02g02238 . 1 954 Primary Pumps ATPases AT2G07560 81.7 0.0e+00 1565.8
Chy03g01190 CCT 8 992 Primary Pumps ATPases AT2G07560 80.3 0.0e+00 1556.2
Chy05g01254 CCT 4 919 Primary Pumps ATPases AT2G07560 84.7 0.0e+00 1547.7
Chy04g00299 CCT 1 953 Primary Pumps ATPases AT2G07560 79.2 0.0e+00 1510.0
Chy09g00272 . 11 975 Primary Pumps ATPases AT2G07560 77.5 0.0e+00 1479.2
Chy02g02522 CCT,ECH 14 960 Primary Pumps ATPases AT2G07560 78.4 0.0e+00 1472.2
Chy12g01318 CCT,ECH 11 999 Primary Pumps ATPases AT2G07560 75.3 0.0e+00 1453.7
Chy05g00892 . 5 854 Primary Pumps ATPases AT4G11730 60.8 8.9e-271 929.9
Chy02g02238 . 1 852 Primary Pumps ATPases AT4G11730 59.1 4.1e-268 921.0
Chy03g01190 CCT 9 862 Primary Pumps ATPases AT4G11730 59.3 5.4e-268 920.6
Chy05g01254 CCT 2 856 Primary Pumps ATPases AT4G11730 58.5 3.0e-266 914.8
Chy02g02093 CCT 5 855 Primary Pumps ATPases AT4G11730 57.4 1.7e-261 899.0
Chy07g01591 . 2 856 Primary Pumps ATPases AT4G11730 57.2 1.7e-261 899.0
Chy04g00299 CCT 16 851 Primary Pumps ATPases AT4G11730 58.0 1.5e-257 885.9
Chy12g01318 CCT,ECH 17 866 Primary Pumps ATPases AT4G11730 56.2 6.6e-250 860.5
Chy02g02522 CCT,ECH 20 863 Primary Pumps ATPases AT4G11730 56.1 2.5e-249 858.6
Chy09g00272 . 17 878 Primary Pumps ATPases AT4G11730 54.7 1.2e-246 849.7
Chy02g02061 . 5 631 Primary Pumps ATPases AT1G15690 87.7 8.0e-307 1049.3
Chy05g01047 . 4 621 Primary Pumps ATPases AT1G15690 77.7 4.7e-267 917.1
Chy01g02096 . 878 1681 Primary Pumps ATPases AT1G16780 86.6 0.0e+00 1346.6
Chy01g02096 . 878 1681 Primary Pumps ATPases AT1G78920 85.9 0.0e+00 1337.0
Chy05g00612 . 194 990 Primary Pumps ATPases AT3G27870 67.1 0.0e+00 1079.7
Chy01g02193 . 240 1261 Primary Pumps ATPases AT3G27870 53.4 4.1e-310 1060.8
Chy01g02194 . 202 1223 Primary Pumps ATPases AT3G27870 53.4 4.1e-310 1060.8
Chy12g01464 . 75 219 Primary Pumps ATPases AT3G27870 63.7 6.6e-50 196.4
Chy02g02243 . 163 544 Primary Pumps ATPases AT4G30120 66.9 2.5e-146 515.4
Chy05g00883 . 168 550 Primary Pumps ATPases AT4G30120 60.8 4.5e-132 468.0
Chy01g02193 . 44 973 Primary Pumps ATPases AT3G13900 72.0 0.0e+00 1322.8
Chy01g02194 . 6 935 Primary Pumps ATPases AT3G13900 72.0 0.0e+00 1322.8
Chy05g00612 . 9 895 Primary Pumps ATPases AT3G13900 57.6 3.3e-299 1024.6
Chy12g01464 . 1 209 Primary Pumps ATPases AT3G13900 66.0 1.4e-76 285.0
Chy10g00952 . 11 1225 Primary Pumps ATPases AT1G59820 78.8 0.0e+00 1936.4
Chy01g02193 . 44 1263 Primary Pumps ATPases AT1G17500 74.2 0.0e+00 1793.9
Chy01g02194 . 6 1225 Primary Pumps ATPases AT1G17500 74.2 0.0e+00 1793.9
Chy05g00612 . 1 990 Primary Pumps ATPases AT1G17500 57.8 0.0e+00 1149.4
Chy12g01464 . 1 209 Primary Pumps ATPases AT1G17500 60.8 1.9e-67 255.0
Chy05g00612 . 7 990 Primary Pumps ATPases AT1G26130 74.4 0.0e+00 1491.5
Chy01g02193 . 50 1215 Primary Pumps ATPases AT1G26130 55.5 0.0e+00 1272.7
Chy01g02194 . 12 1177 Primary Pumps ATPases AT1G26130 55.5 0.0e+00 1272.7
Chy12g01464 . 1 215 Primary Pumps ATPases AT1G26130 67.0 1.2e-82 305.4
Chy10g01100 . 5 144 Primary Pumps ATPases AT1G26130 67.1 1.6e-47 188.7
Chy03g00455 . 133 861 Primary Pumps ATPases AT5G04930 60.2 1.7e-270 929.5
Chy05g00612 . 3 990 Primary Pumps ATPases AT1G68710 74.7 0.0e+00 1494.6
Chy01g02193 . 50 1253 Primary Pumps ATPases AT1G68710 54.9 0.0e+00 1292.7
Chy01g02194 . 12 1215 Primary Pumps ATPases AT1G68710 54.9 0.0e+00 1292.7
Chy12g01464 . 1 215 Primary Pumps ATPases AT1G68710 67.9 9.5e-83 305.8
Chy10g01100 . 1 144 Primary Pumps ATPases AT1G68710 67.3 8.7e-52 203.0
Chy05g00612 . 7 990 Primary Pumps ATPases AT3G25610 73.7 0.0e+00 1463.4
Chy01g02193 . 50 1251 Primary Pumps ATPases AT3G25610 55.8 0.0e+00 1297.3
Chy01g02194 . 12 1213 Primary Pumps ATPases AT3G25610 55.8 0.0e+00 1297.3
Chy12g01464 . 1 219 Primary Pumps ATPases AT3G25610 65.6 1.1e-83 308.9
Chy10g01100 . 5 143 Primary Pumps ATPases AT3G25610 67.6 5.2e-49 193.7
Chy05g00612 . 7 990 Primary Pumps ATPases AT1G13210 73.4 0.0e+00 1442.6
Chy01g02193 . 50 1250 Primary Pumps ATPases AT1G13210 55.0 0.0e+00 1281.5
Chy01g02194 . 12 1212 Primary Pumps ATPases AT1G13210 55.0 0.0e+00 1281.5
Chy12g01464 . 1 218 Primary Pumps ATPases AT1G13210 69.5 3.4e-85 313.9
Chy10g01100 . 5 143 Primary Pumps ATPases AT1G13210 59.7 1.5e-43 175.6
Chy01g00320 . 1 1104 Primary Pumps ATPases AT5G44240 83.6 0.0e+00 1877.4
Chy01g02193 . 44 1265 Primary Pumps ATPases AT1G54280 73.5 0.0e+00 1772.3
Chy01g02194 . 6 1227 Primary Pumps ATPases AT1G54280 73.5 0.0e+00 1772.3
Chy05g00612 . 9 990 Primary Pumps ATPases AT1G54280 58.2 0.0e+00 1144.4
Chy12g01464 . 1 209 Primary Pumps ATPases AT1G54280 65.6 5.1e-76 283.5
Chy01g02193 . 44 1263 Primary Pumps ATPases AT1G72700 73.1 0.0e+00 1770.4
Chy01g02194 . 6 1225 Primary Pumps ATPases AT1G72700 73.1 0.0e+00 1770.4
Chy05g00612 . 1 990 Primary Pumps ATPases AT1G72700 57.8 0.0e+00 1144.4
Chy12g01464 . 1 209 Primary Pumps ATPases AT1G72700 63.6 1.1e-70 265.8
Chy01g02112 . 6 1090 Primary Pumps ATPases AT3G21180 74.2 0.0e+00 1552.3
Chy05g00853 . 1 900 Primary Pumps ATPases AT3G21180 70.5 0.0e+00 1218.0
Chy01g01544 . 72 1011 Primary Pumps ATPases AT3G21180 55.5 1.6e-283 972.6
Chy05g01188 . 22 549 Primary Pumps ATPases AT3G21180 54.8 3.1e-154 543.1
Chy05g00854 . 13 187 Primary Pumps ATPases AT3G21180 51.1 1.1e-42 172.6
Chy07g00189 . 1 1017 Primary Pumps ATPases AT2G22950 76.2 0.0e+00 1527.3
Chy04g01604 . 1 1011 Primary Pumps ATPases AT2G22950 62.8 0.0e+00 1228.8
Chy01g01544 . 16 1012 Primary Pumps ATPases AT3G22910 64.5 0.0e+00 1247.6
Chy01g02112 . 131 1075 Primary Pumps ATPases AT3G22910 55.8 2.2e-282 968.8
Chy05g00853 . 1 890 Primary Pumps ATPases AT3G22910 55.1 5.2e-260 894.4
Chy05g01188 . 1 554 Primary Pumps ATPases AT3G22910 66.8 1.2e-208 723.8
Chy01g02112 . 15 1090 Primary Pumps ATPases AT4G29900 69.9 0.0e+00 1436.8
Chy05g00853 . 1 889 Primary Pumps ATPases AT4G29900 72.6 0.0e+00 1246.9
Chy01g01544 . 73 1011 Primary Pumps ATPases AT4G29900 55.7 4.4e-294 1007.7
Chy04g01604 . 21 1011 Primary Pumps ATPases AT4G29900 50.1 1.7e-253 872.8
Chy05g01188 . 1 549 Primary Pumps ATPases AT4G29900 53.9 1.6e-158 557.4
Chy05g00854 . 10 188 Primary Pumps ATPases AT4G29900 58.7 7.6e-52 203.0
Chy07g00189 . 1 1019 Primary Pumps ATPases AT1G27770 80.9 0.0e+00 1627.1
Chy04g01604 . 1 1011 Primary Pumps ATPases AT1G27770 63.6 0.0e+00 1245.0
Chy01g02112 . 13 1073 Primary Pumps ATPases AT5G57110 68.8 0.0e+00 1421.8
Chy05g00853 . 1 889 Primary Pumps ATPases AT5G57110 74.0 0.0e+00 1269.6
Chy01g01544 . 74 1011 Primary Pumps ATPases AT5G57110 54.7 5.1e-290 994.2
Chy05g01188 . 1 551 Primary Pumps ATPases AT5G57110 54.8 6.4e-160 562.0
Chy05g00854 . 2 187 Primary Pumps ATPases AT5G57110 52.1 2.6e-44 177.9
Chy01g01544 . 9 1011 Primary Pumps ATPases AT3G63380 67.3 0.0e+00 1309.7
Chy01g02112 . 132 1088 Primary Pumps ATPases AT3G63380 54.8 1.5e-283 972.6
Chy05g00853 . 1 890 Primary Pumps ATPases AT3G63380 54.3 3.5e-256 881.7
Chy05g01188 . 1 554 Primary Pumps ATPases AT3G63380 65.3 5.7e-206 714.9
Chy07g00189 . 1 1017 Primary Pumps ATPases AT4G37640 77.8 0.0e+00 1573.5
Chy04g01604 . 1 1011 Primary Pumps ATPases AT4G37640 63.3 0.0e+00 1248.8
Chy04g01604 . 104 1030 Primary Pumps ATPases AT2G41560 72.2 0.0e+00 1323.9
Chy07g00189 . 111 1019 Primary Pumps ATPases AT2G41560 64.1 0.0e+00 1142.9
Chy04g01604 . 57 1030 Primary Pumps ATPases AT3G57330 71.7 0.0e+00 1370.1
Chy07g00189 . 60 1019 Primary Pumps ATPases AT3G57330 63.0 0.0e+00 1178.7
Chy02g02243 . 14 710 Primary Pumps ATPases AT4G30110 69.2 2.8e-276 948.3
Chy05g00883 . 17 726 Primary Pumps ATPases AT4G30110 66.0 3.7e-268 921.4
Chy02g02243 . 5 704 Primary Pumps ATPases AT2G19110 67.6 4.9e-278 954.5
Chy05g00883 . 15 726 Primary Pumps ATPases AT2G19110 65.9 5.1e-267 917.9
Chy02g00041 . 1 980 Primary Pumps ATPases AT5G44790 73.7 0.0e+00 1389.4
Chy08g00480 . 1 981 Primary Pumps ATPases AT1G63440 72.7 0.0e+00 1379.8
Chy09g01215 . 9 996 Primary Pumps ATPases AT1G63440 66.3 0.0e+00 1260.7
Chy11g00510 . 104 806 Primary Pumps ATPases AT4G37270 77.8 1.8e-313 1071.6
Chy11g00558 . 96 797 Primary Pumps ATPases AT4G37270 75.0 6.8e-303 1036.6
Chy05g01160 . 1 1192 Primary Pumps ATPases AT5G23630 78.3 0.0e+00 1850.1
Chy06g00320 . 1 201 Primary Pumps ATPases AT5G47030 72.5 1.9e-76 282.3
Chy12g01065 . 7 372 Primary Pumps ATPases AT1G15700 68.7 4.1e-125 444.9
Chy02g00399 . 9 370 Primary Pumps ATPases AT1G15700 66.7 8.1e-121 430.6
Chy06g01816 . 22 349 Primary Pumps ATPases AT1G15700 61.4 2.2e-102 369.4
Chy03g00265 . 1 241 Primary Pumps ATPases AT4G09650 62.0 3.2e-72 268.5
Chy01g01866 CCT 107 250 Primary Pumps ATPases AT5G13450 64.6 1.5e-48 189.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002786 1 2 1 1 1 2 2 2 2 2 2 2 3 2 2 2 2 5 1 2 2 2 2 2 1 2 2 2 2 0 56
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy12g01065 Chy_Chr12 FPKM 18.75905 19.37677 17.78038 17.877018 23.111429 24.996925 23.089241 20.388926 20.029825 18.748234