Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01101 ATGCCACTCCCTCATTGCTACTCTGTTTTAATACTCACTCTGTTTCTCTTCATAACCCCATCTCAATCCACCAAATGCCGAACTTCCTGCGGCAAAATCCAAATCAACTACCCATTTGGTATCGACGACGGCTGCGGCAGCCCCTACTACCGCCACATCCTCGACTGTACCGATTCCGGCAAGCTCGAATTGAGAACTCCATCAGGGAGATACCCAATTGAAAGCATAAGCTACGCAGAACGCCACATTAAAATCACTGACCCTTACATGTGGAACTGCGATGACAGTGATAATTTCCGCCCCACGAGACCATTCAGCCTTGACACAAGCACCCATCTCTCGCTTTCCTCCCAAAACGACTACTTGTTCTTCAACTGCAGTGAGGAAAATGTAATTGTGGCTCCTAAGCCAATGTTCTGCGAGCGGTTTCCAGAGCGGTGTGATTCGTCTTGCGACAGTGCGAGCTATCTATGCAGACACTTGCCGGAGTGCAGCGGGGGTTTGGGGGCGGCGTCTTGCTGTTCGTATTATCCAAAGGCGACAGAATCGTTGAGGCTGATGCTGAAGTACTGTTCGAGCTATACGAGTGTGTATTGGAAGAGCATTGGGGCGCCGGATCAGCCGTATGATCAGGTTCCGGAATATGGGATAAGGGTTGATTTTGATATTCCGGTGTCGACGAGGTGTTTGCATTGCCAAGATATGGTGAGAGGAGGAGGAACTTGTGGATTTGATACGCAGAGTCAGGGTTTCTTGTGCCTTTGTGGTGAACGTAATGTTACTACTTTTTGTGGAGATCATGACACGTCTCAACAAAAGAAGAAATATGTTGTAATTTCAGGGACGGCAGCGGCAGTGTCGGCTGCTGGGGTGTTTGTAGTTGCGGCTGCTGTAATATGGTTTGTAAGAAGAGTAAGAGCCAAAGCTCCGGTAACCTGCGGGGTTCAAAGCAATGACAATAGGCTGTTTTGA 972 48.77 MPLPHCYSVLILTLFLFITPSQSTKCRTSCGKIQINYPFGIDDGCGSPYYRHILDCTDSGKLELRTPSGRYPIESISYAERHIKITDPYMWNCDDSDNFRPTRPFSLDTSTHLSLSSQNDYLFFNCSEENVIVAPKPMFCERFPERCDSSCDSASYLCRHLPECSGGLGAASCCSYYPKATESLRLMLKYCSSYTSVYWKSIGAPDQPYDQVPEYGIRVDFDIPVSTRCLHCQDMVRGGGTCGFDTQSQGFLCLCGERNVTTFCGDHDTSQQKKKYVVISGTAAAVSAAGVFVVAAAVIWFVRRVRAKAPVTCGVQSNDNRLF* 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 16018015 16019492 - Chy12G217010.1 Chy12g01101 238882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01101 323 PANTHER WALL-ASSOCIATED RECEPTOR KINASE, GALACTURONAN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 10 312 - -
Chy12g01101 323 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 10 312 - -
Chy12g01101 323 Pfam Wall-associated receptor kinase galacturonan-binding 26 87 IPR025287 GO:0030247
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g00436 Chy12g01101 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00417 Chy-Chr2:2638072 Chy12g01101 Chy-Chr12:16018015 1.01E-134 dispersed
Chy08g00726 Chy-Chr8:15034953 Chy12g01101 Chy-Chr12:16018015 3.46E-08 dispersed
Chy12g01101 Chy-Chr12:16018015 Chy12g01261 Chy-Chr12:17200370 1.80E-17 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01101 - - csv:101213294 633.254