Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01121 ATGGCGTCAGGATACAAGACTGATGAGGATACTAACGATAAAGATAATAGTATCTGGGTTTTAGATCACCAGATGGACCAGTCAATGGAGGAGGAGTCTAGGCGGCTAAGAAATGTGCATCAGGAAAAGGATCATTCTGTGTATAAAATTCTACAATTTGCATTCCAAAGCCTTGGAATAGTGTATGGAGATTTGGGGACTTCCCCTTTATATGTCTTCTATAACACATTTCCTGATGGAGTTGAAAATACGGAGGATTTGATAGGAGCTCTGTCATTGATTATATACTCTCTAACTCTCATAACCCTCATTAAGTACGTATTTATTGTCTGCAAGGCAAATGACAATGGTCAAGGTGGAACATTTGCTTTGTATTCATTGCTGAGCCGTCATGCTAACATATTGACTATTCCTAACCATGACCTCAGCGATGAGAAGCTTACAACTTATAGTCGTGTTGTGTTCCGGGAACAATCATTTGCTGCAAAAACTAAGAGATGGCTGGAAGGGCATCATGTTAAGAAACATGCCATTCTTGTTCTCGTTCTTGTTGGCTCTTGCATGGTGATTGGGGATGGAATTCTAACACCTGCTATTTCAGTTCTTTCTGCTGTTGGGGGGATCAACGTTGGTCGTGCAAAAATAAGCGGTGATGTTGCTGTTCTTGTTGCCATTGTCATACTTATTTTCTTGTTTAGCATGCAACGTTATGGCACAGATAAAGTTGGTTGGCTTTTTGCCCCGGTAGTTTTTCTGTGGTTCATCTTAATAGGAGGCATCGGCATATTTAACATCTGCAAATATGATTACACTGTCTTGAGAGCCTTTTCTCCAGTACATATATATCGGTACTTCAAAAGGGGAGGGAAAGATGGATGGACATCTCTTGGAGGGATCATGCTTAGTATTACAGGAACTGAAGCACTTTTTGCAGACCTATCCCATTTTCCAGTTTCCTCCATACAAATTGCTTTTACAGTAGTCGTATTTCCTTGCCTTCTTTTAGCCTACACTGGACAAGTTGCCTATCTCATGAAACACCCAAATTATGTTGTCGGTGCCTTCTACCATTCAATCCCAGAAAGTATATATTGGCCTGTATTTCTTGTTGCAACTACCGCCGCTATCGTTGCAAGCCAAGCCACCATATCTGCAACCTTTTCATTAGTCAAGCAAGCCCTTGCACTTGGTTGCTTTCCAAGAGTTAAAGTTGTTCATACTTCTACGATGTTCCGTAATCAGATATATATTCCTGATATTAATTGGATCCTGATGGTCCTTTGCATTGCCGTGACAGCTGGGTTTCAAAATCAAACCCAAATTGGAAATGCTTCTGGGACAGCAGTGATTATAGTGATGTTGGTAACCACATTCCTCATGACTTTAATAATGATATTAGTGTGGCATTCCCACTGGAGTCTAGTTCTGCTCTTCATTTCCTTATCACTGATTGTGGAGGGTTTCTACCTCTCCTCAGTTATTCAGAAGGTTTATCAAGGTGGCTGGGTTCCCCTGGTTATAGCAACAGCATTCTTCATCATCATGTACGTTTGGCATTATGGTACGGCTAAACGTTATGAGATTGAGATGCACACTAAGGTTTCAATGGCGTGGATTCTTAGCCTTGGCCCCAGTTTAGGACTTGTAAGGGTGCCTGGGATAGGACTTGTGTACACGGAACTAGCAAGTGGTGTCCCCCACATATTTTCACATTTCATCACAAACTTACCCGCCATTCATTCTGTTGTGGTTTTTGTGTGTTTGAAGTGTTTGCCTGTCCACACAGTCCCAGAAGAAGAGAGATTTCTAGTAAAACGGATTGGGCCAAAGAATTTTCGCATGTTTCGATGTGTAGCTAGATATGGTTACAAGGACCTCCACACGAAAGATGATGATTTTGAGAAGAAACTCTTTGATAGCATTTTCTTGTTTGTTCGACTTGAGTCGTTGATGGATGGTGGATCTTCAGATTCGGACGTGTCAAGTCTCCTTGATGAACAAAATGAAACAACTTTCGATTGCACACTGAAAGCCATTAATTCAACGTGTTCATCTTCAACAGCCATACAATTGGCAGACTCAATTGAGATTGCCAATTCTCCATTGCATCAAAACATATCCATCATAGCACCCGATCAAGAAAATGATCAGATCGAGGTAGATGAGCTAGAATTCTTGGTTAGCAGTAAAAATGTTGGAGTTGTACACTTTCTTGGAAATACAGTAATGAAAGCTAGGAGGGACTCTAGATTTTGTAAAAGGATCGCTATAGATTATATTTATGCCTTTCTTAGAAAGATCTGCAGGGAGAACAGCGTGATGTTCAATGTTCCCCATGAGAGTTTGCTTAATGTTGGTCAAACATTCTATGTATGA 2376 40.78 MASGYKTDEDTNDKDNSIWVLDHQMDQSMEEESRRLRNVHQEKDHSVYKILQFAFQSLGIVYGDLGTSPLYVFYNTFPDGVENTEDLIGALSLIIYSLTLITLIKYVFIVCKANDNGQGGTFALYSLLSRHANILTIPNHDLSDEKLTTYSRVVFREQSFAAKTKRWLEGHHVKKHAILVLVLVGSCMVIGDGILTPAISVLSAVGGINVGRAKISGDVAVLVAIVILIFLFSMQRYGTDKVGWLFAPVVFLWFILIGGIGIFNICKYDYTVLRAFSPVHIYRYFKRGGKDGWTSLGGIMLSITGTEALFADLSHFPVSSIQIAFTVVVFPCLLLAYTGQVAYLMKHPNYVVGAFYHSIPESIYWPVFLVATTAAIVASQATISATFSLVKQALALGCFPRVKVVHTSTMFRNQIYIPDINWILMVLCIAVTAGFQNQTQIGNASGTAVIIVMLVTTFLMTLIMILVWHSHWSLVLLFISLSLIVEGFYLSSVIQKVYQGGWVPLVIATAFFIIMYVWHYGTAKRYEIEMHTKVSMAWILSLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCLKCLPVHTVPEEERFLVKRIGPKNFRMFRCVARYGYKDLHTKDDDFEKKLFDSIFLFVRLESLMDGGSSDSDVSSLLDEQNETTFDCTLKAINSTCSSSTAIQLADSIEIANSPLHQNISIIAPDQENDQIEVDELEFLVSSKNVGVVHFLGNTVMKARRDSRFCKRIAIDYIYAFLRKICRENSVMFNVPHESLLNVGQTFYV* 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 16186296 16190529 + Chy12G217210.1 Chy12g01121 238902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01121 791 PANTHER POTASSIUM TRANSPORTER 4 790 - -
Chy12g01121 791 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 4 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
Chy12g01121 791 Pfam K+ potassium transporter 54 625 IPR003855 GO:0015079|GO:0016020|GO:0071805
Chy12g01121 791 TIGRFAM kup: potassium uptake protein 54 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01475 Chy-Chr4:21404996 Chy12g01121 Chy-Chr12:16186296 0 dispersed
Chy07g01693 Chy-Chr7:20759611 Chy12g01121 Chy-Chr12:16186296 0 dispersed
Chy12g00312 Chy-Chr12:3377780 Chy12g01121 Chy-Chr12:16186296 0 dispersed
Chy12g01120 Chy-Chr12:16176746 Chy12g01121 Chy-Chr12:16186296 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01121 K03549 - csv:101217671 1495.72