Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01137 ATGAAATGGGGGGTTCTTCTTGTTCTTATTCTGGCCTCCGCCACCGCAGTGTCGTGGGCCGAGAAAGATTTCGAGGATGACGGAGAAGAATACCCAAGCCTTGAGATTCCGCAGTTGAAGGATTTTTCAGCTTTTGGGGACTTTCTTTCTTATGGGTTCTACCAGAAAAGTTGCCCCGGCGTCGAAGGCATTATTCACCGTAAAGTCAGGCAGTGGTTCGATAAAGACAACACCATTGCCGCTGGCCTCTTGAGATTGCACTTTCATGACTGCGTCGTCAGGGGTTGCGATGGTTCTATTCTTCTGGATTACGAGGGAAGTGAGAGACGGGCTCCGGCGAGCAAGACACTTAGAGGTTTCGAAGTGATCGACGATATCAAAGCTGAGTTAGAGAAAAAGTGCCCGAAAACAGTTTCTTGCGCTGACATTTTAACCGCTGCTGCGAGAGAAGCGACGGTCCTCATGGGAGGGCCTTATTGGATGGTACCATATGGAAGAAGAGATGGAGTTGATTCCATTGCCAAAGAAACAGAATTAGTGCCAATGGGTATTGAAGACATCACTTCTCTCATTGAATTATACCAATCTCTTGGCTTGAATGTCCTCGATTTGGTCGTTCTTTCAGGGGCGCACACAATCGGAAGGGCAACGTGTGGAGTGATACAAGAAAGACTTTACAATTACAGCGCAACTGGAAAACCCGACCCATCATTGAATCCAAAATACTTAAACTTCTTGAGAAGAAAATGCCGATGGGCCACCGACTACGCGGACCTTGACGCTACAACTCCCAACAAATTCGACAACGCCTATTACTCTAATCTCCCAAAAAAGATGGGTCTTTTGTCCTCTGATTCCGCTCTCTACACCGATTCAAGAACTTCCCCTATTGTTAAAGCCTTGGCCTATCAGCCCTCCATTTTCCGCCACCAATTTGCTGTGTCCATGGCTAAGCTTGGGAACGTTCAAGTTCTTACTGACCTTTTCGAAGGCGAGATTCGAACCAAATGCAGTTGTAGGAATTCTCCTTGA 1032 47.0 MKWGVLLVLILASATAVSWAEKDFEDDGEEYPSLEIPQLKDFSAFGDFLSYGFYQKSCPGVEGIIHRKVRQWFDKDNTIAAGLLRLHFHDCVVRGCDGSILLDYEGSERRAPASKTLRGFEVIDDIKAELEKKCPKTVSCADILTAAAREATVLMGGPYWMVPYGRRDGVDSIAKETELVPMGIEDITSLIELYQSLGLNVLDLVVLSGAHTIGRATCGVIQERLYNYSATGKPDPSLNPKYLNFLRRKCRWATDYADLDATTPNKFDNAYYSNLPKKMGLLSSDSALYTDSRTSPIVKALAYQPSIFRHQFAVSMAKLGNVQVLTDLFEGEIRTKCSCRNSP* 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 16327610 16329932 - Chy12G217370.1 Chy12g01137 238918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01137 343 PRINTS Haem peroxidase superfamily signature 80 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g01137 343 PRINTS Haem peroxidase superfamily signature 203 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g01137 343 PRINTS Haem peroxidase superfamily signature 156 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g01137 343 PRINTS Haem peroxidase superfamily signature 138 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g01137 343 PRINTS Haem peroxidase superfamily signature 260 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g01137 343 ProSitePatterns Peroxidases proximal heme-ligand signature. 203 213 IPR019793 -
Chy12g01137 343 ProSiteProfiles Plant heme peroxidase family profile. 48 341 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g01137 343 Gene3D - 52 341 - -
Chy12g01137 343 Gene3D Peroxidase, domain 2 181 319 - -
Chy12g01137 343 PANTHER PEROXIDASE 25-RELATED 38 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01137 343 SUPERFAMILY Heme-dependent peroxidases 49 341 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy12g01137 343 CDD secretory_peroxidase 49 338 IPR033905 GO:0004601|GO:0042744
Chy12g01137 343 ProSitePatterns Peroxidases active site signature. 80 91 IPR019794 GO:0004601
Chy12g01137 343 PANTHER PEROXIDASE 38 339 - -
Chy12g01137 343 PRINTS Plant peroxidase signature 202 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01137 343 PRINTS Plant peroxidase signature 82 102 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01137 343 PRINTS Plant peroxidase signature 258 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01137 343 PRINTS Plant peroxidase signature 274 291 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01137 343 PRINTS Plant peroxidase signature 58 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01137 343 PRINTS Plant peroxidase signature 156 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01137 343 PRINTS Plant peroxidase signature 137 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01137 343 PRINTS Plant peroxidase signature 118 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01137 343 PRINTS Plant peroxidase signature 314 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01137 343 Pfam Peroxidase 67 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g01054 Chy-Chr11:15055342 Chy12g01137 Chy-Chr12:16327610 8.47E-139 dispersed
Chy12g01137 Chy-Chr12:16327610 Chy01g01797 Chy-Chr1:23557232 6.76E-82 dispersed
Chy12g01137 Chy-Chr12:16327610 Chy07g01260 Chy-Chr7:17305002 1.57E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01137 K00430 - csv:101208042 694.115