Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01214 ATGCCTTACTTGAAAGCTGTGGTTAAAGAGGTGCTCCGATTGCATCCACCAGCGCCGGTTTCGGTTCCGAGAGAAACTCTAGAAGATGTGAGGATTGAAGGGTATGATATTCCAGCTAAAACAAGGGTTTTTGTGAATGTTTGGGCAATTGGGAGAGACCCAGAATCGTGGAAGGATCCAGAAAATTTTGAGCCAGAAAGGTTTTTGGAGAGTGAAGTTGATTACAAAGGGTTGAATTTTGATTTCATTCCATTTGGAGCTGGAAGAAGGATTTGTCCAGGTATTACTATGGGAATAGTAACGGTTGAGCTTGCTTTGGCGCAAATTTTGCATAGCTTTGATTGGGAACTTCCTAATGGAATTGAAGCTAAAGATTTGGATATGACTGAAGTTTTTGGTATCACAATGCATAGAAAAGCTCACTTGGAACTAAATCACCATCCCCACATCTGTTTCCGCCGCCTATCCCAAAAGTTCGGCCCCATCATCCTCCTTCAACTCGGACAAATCCCAACTCTCATAATCTCATCACCAAAAATCGCCAAAGAAGCCTTCAAAACCCACGATCTCATCTTTTCAAGCCGTCCTTTTCTCTTCTCCGCCCAACACACCTTCTACAACTGCACTGACATTGCCTTTTCCCCTTACGGCTCTTACTGGCGCCATGTCAGAAAAATATGCATCCTCCAACTCCTCAGCACCAAGAGGGTTCAATCCTTTGCCTCCATTCGACAACAAGAAGTTGCTCGTTTGGTAAACAGAATTTCCCACTCCAACAGTCAGGTCGATTTGTCCAACTTGTTAGCGATGTATGGTAATGATGTGATCTGCCGAATGGCGCTTGGGAGGGAATTTTCCGCCGGTGGTGCGTACCATCTTCACGGGATTCAAGAGATAATCGAAGAGTATCAGCTTTTGCTTGGTGGGTTCTGTTTAGGGGATTTGTTCCCTTCCTTGTCATTTATTAGTAAGCTAATAGGGATTAAATCGAGGCTTGTGAGGACGTTTAAAAGGTTCGATAAGTTGTTGGATCAAGTAATAGTTGAACATCAGAGTCCCGAGGGAGAGAAACTTGGAGAATCTAAGGATCTTGTTGATGTTTTGCTTGATATACAAAAGAATGGATCTGATGATAGATTCACCCTGACTATGGATAATGTTAAAGCCATTCTTTTGGACATGTTTATTGCAGGGACTGAAACAACGTTTTCAATTCTTGATTGGGGGATGACGGAGCTAATAACACACCCAAAGGCCATGGAAAGAGTACAAAAGGAAATTCGAAGCATAGTTGGTGACAGAAAAATTGTAACAGAGGGTGATATTTTAGAAATGCATTATTTGAAAGCTGTGGTTAAAGAGGTGCTCCGATTGCATCCACCAGCGCCGCTTGCACTTCCAAGAGAAACTACAGAAGATGTGAGGATTGAAGGTTACGATATTCCAGGTAAAACAAGGGTTTTTGTGAATGTTTGGGGAATTGGGAGAGACCCAGAATCGTGGAAGAACCCAGAAAGTTTTGAGCCAGAGAGATTTGTAGAGAATGAAGTTGATTACAGAGGACTGGATTTTGAGTTCATTCCGTTTGGTGTTGGAAGAAGAATTTGTCCAGGTATTACTACGGGGATGGCCATGATTGAGATTGCTTTTGCTCAAATTTTGCATAGCTTTAATTGGGAGCTTCCAAGTGGGATTGAAGTTAAGGATTTAGATATGACTGATGTTGTTGGTGTCACAATGCATAGAAAAGCTCACTTGGAGGTTGTAGCAAAGCCTTACTTTGGCTCATCCATCTCAAATTAA 1803 42.32 MPYLKAVVKEVLRLHPPAPVSVPRETLEDVRIEGYDIPAKTRVFVNVWAIGRDPESWKDPENFEPERFLESEVDYKGLNFDFIPFGAGRRICPGITMGIVTVELALAQILHSFDWELPNGIEAKDLDMTEVFGITMHRKAHLELNHHPHICFRRLSQKFGPIILLQLGQIPTLIISSPKIAKEAFKTHDLIFSSRPFLFSAQHTFYNCTDIAFSPYGSYWRHVRKICILQLLSTKRVQSFASIRQQEVARLVNRISHSNSQVDLSNLLAMYGNDVICRMALGREFSAGGAYHLHGIQEIIEEYQLLLGGFCLGDLFPSLSFISKLIGIKSRLVRTFKRFDKLLDQVIVEHQSPEGEKLGESKDLVDVLLDIQKNGSDDRFTLTMDNVKAILLDMFIAGTETTFSILDWGMTELITHPKAMERVQKEIRSIVGDRKIVTEGDILEMHYLKAVVKEVLRLHPPAPLALPRETTEDVRIEGYDIPGKTRVFVNVWGIGRDPESWKNPESFEPERFVENEVDYRGLDFEFIPFGVGRRICPGITTGMAMIEIAFAQILHSFNWELPSGIEVKDLDMTDVVGVTMHRKAHLEVVAKPYFGSSISN* 601
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 16896843 16902632 - Chy12G218140.1 Chy12g01214 238995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01214 600 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 144 593 - -
Chy12g01214 600 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 2 142 - -
Chy12g01214 600 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 2 142 - -
Chy12g01214 600 Pfam Cytochrome P450 143 582 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01214 600 Pfam Cytochrome P450 1 138 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01214 600 Gene3D Cytochrome P450 1 141 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01214 600 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 144 593 - -
Chy12g01214 600 SUPERFAMILY Cytochrome P450 145 592 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01214 600 Gene3D Cytochrome P450 142 593 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01214 600 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 85 94 IPR017972 GO:0005506|GO:0016705
Chy12g01214 600 PRINTS E-class P450 group I signature 536 559 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01214 600 PRINTS E-class P450 group I signature 449 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01214 600 PRINTS E-class P450 group I signature 526 536 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01214 600 PRINTS E-class P450 group I signature 156 175 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01214 600 PRINTS E-class P450 group I signature 490 514 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01214 600 PRINTS E-class P450 group I signature 386 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01214 600 PRINTS E-class P450 group I signature 271 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01214 600 PRINTS E-class P450 group I signature 406 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01214 600 PRINTS E-class P450 group I signature 180 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01214 600 SUPERFAMILY Cytochrome P450 1 145 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01214 600 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 529 538 IPR017972 GO:0005506|GO:0016705
Chy12g01214 600 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01214 600 PRINTS P450 superfamily signature 527 536 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01214 600 PRINTS P450 superfamily signature 397 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01854 Chy-Chr6:22283204 Chy12g01214 Chy-Chr12:16896843 5.59E-43 dispersed
Chy12g01214 Chy-Chr12:16896843 Chy12g01221 Chy-Chr12:16937742 6.04E-43 dispersed
Chy12g01213 Chy-Chr12:16884510 Chy12g01214 Chy-Chr12:16896843 7.25E-15 tandem
Chy12g01214 Chy-Chr12:16896843 Chy12g01215 Chy-Chr12:16902687 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01214 - - csv:101209244 880.167