Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01230 ATGGAATATCTAGAATGTGTTATCAAAGAATCACTAAGGTATCATCCACCAGCTCCTCTATTGTTACCTAGAGAAACATCTGAAATGGTAAAGCTTGGAGGTTACTGTATTCCATCAAAAACCAGAGTGTTTTTCAATGCTTGGGCGATTCAAAGAGATCCAAACATCTGGGAAAATCCAGAGCAGTTCATCCCAGAGAGATTTATGAACAACCCAGTGGATTTCAAAGGACAAGAGTGCCATTGCCTACCATTTGGTGCTGGGAGAAGAATTTGCCCAGGGATGAATTTTGCTTTTGCTTCAATCGAATATGTATTGGCTAACCTTTTACAGTGGTTTGATTGGAAGTTGGCTGATGATAATATGGTAGCTAAAGACATGGACATGTCTGAAGACATGGGGATTGCTCTCGTCAAGAAACAGCCCCTTTTTCTTAAGCCAATACCACGTTCAACTTAA 459 40.31 MEYLECVIKESLRYHPPAPLLLPRETSEMVKLGGYCIPSKTRVFFNAWAIQRDPNIWENPEQFIPERFMNNPVDFKGQECHCLPFGAGRRICPGMNFAFASIEYVLANLLQWFDWKLADDNMVAKDMDMSEDMGIALVKKQPLFLKPIPRST* 153
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 17019817 17020275 + Chy12G218300.1 Chy12g01230 239011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01230 152 PRINTS P450 superfamily signature 92 103 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01230 152 PRINTS P450 superfamily signature 83 92 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01230 152 PRINTS P450 superfamily signature 6 17 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01230 152 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 85 94 IPR017972 GO:0005506|GO:0016705
Chy12g01230 152 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 149 - -
Chy12g01230 152 PRINTS E-class P450 group I signature 92 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01230 152 PRINTS E-class P450 group I signature 5 23 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01230 152 PRINTS E-class P450 group I signature 82 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01230 152 PRINTS E-class P450 group I signature 46 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01230 152 PANTHER CYTOCHROME P450 71B11-RELATED 1 149 - -
Chy12g01230 152 SUPERFAMILY Cytochrome P450 1 150 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01230 152 Gene3D Cytochrome P450 1 143 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01230 152 Pfam Cytochrome P450 1 137 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy12g01230 Chy-Chr12:17019817 Chy12g01217 Chy-Chr12:16915450 2.22E-60 dispersed
Chy12g01228 Chy-Chr12:17006735 Chy12g01230 Chy-Chr12:17019817 1.20E-48 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01230 K20617 - csv:101206414 311.227