Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01265 ATGGAGGAAACATTTTTTCCATTTCGTGGGATTAAGAATGATATAAGAGGAAGACTTCTGTGCTACAGACAGGATTGGACTGGTGGCCTTCGCACTGGTATCAGGATCTTAGCCCCAACAACGTACATATTCTTTGCTTCAGCAATTCCGGTTATATCGTTTGGGGAGCAGCTAGAAAGGAACACGTATGGGACTCTAACTGCTGTACAAACTCTAGCATCAACAGCACTGTGTGGCATCATCCACTCAGTCTTTGGAGGACAACCTCTGCTCATCCTTGGCGTTGCTGAACCAACTGTTTTGATGTATACGTTCATGTTCGACTTTGCAAAGGACCGAAAGGAACTGGGGCAGGAACTATTCTTAGCCTGGACGGGATGGGTATGTGTATGGACAGCCATTTTGCTTTTTTTGCTAGCGGTGTTGGGTGCATGCTCCCTGATCAATAGGTTCACACGTGTTGCTGGAGAATTGTTTGGTCTGCTAATTGCCATGCTCTTCATGCAGCAGGCGATACGTGGTGTAGTGGAGGAATTCGGCATACCCCAAAGGGAAAATCCTAATCAGGTGTCACTCCAAGCTCCTTGGCGCTTTGGCAATGGAATGTTTGCATTAGTGCTGTCCTTCGGGCTTCTGCTAACTGCCCTAAAAAGCCGCAAGGCTAGATCATGGCGCTATGGAACTGGTTGCCTACGTGGCTTTATCGCTGATTATGGAGTTCCACTTATGGTGCTCATATGGACAGCCTTATCTTACATTCCAGTCAACAATGTACCACTTGGGATCCCAAGAAGGCTTTTTAGTCCCAATCCATGGTCTCAGGGTGCATACTCTAATTGGACAGTTATAAAGGAAATGTTGAGAGTGCCTCCATTGTATATAGTTGGAGCATTCATACCAGCAACCATGATAGCAGTTCTTTACTACTTTGATCACAGTGTTGCATCTCAACTTGCCCAACAGAAAGAGTTTAATTTGAAAAAACCAGCTTCTTATCATTATGATCTTCTTCTCCTAGGTTTCCTTGTTATTCTGTGTGGACTTATTGGCATACCACCTGCCAATGGTGTAATTCCTCAGTCTCCTATGCACACGAAAAGCTTAGCTACCCTCAAACATCAGCTCTTGCGAAGCAAGCTGGTAGCAGCAGCACGACAAAGTTTCCGTAAAAATTCAAACTTAAGTCAGTTTTACCAGAACATGCAAGAGGCATACAACGGGATGCAGACTCCTTTAATTTATCAAAATCCACCAGTTGCGGGGCTGAAGGAGTTGAAGGATTCCACCATCCAACTAGCTTCAAGAACTGGCTACATTGATGCACCTGTTGATGAAACCGTTTTCGATGTGGACAAAGATATTGATGATCTTCTGCCAGTAGAAGTTAAAGAACAACGTCTCAGCAATTTGCTTCAGGCAGTAATGGTTGGTGGTTGTGTTGCTGCTATGCCTCTTTTAAAGAAGATCCCAACTTCGGTTCTTTGGGGTTACTTTGCTTTCATGGCAATTGAGAGCTTGCCTGGAAATCAATTCTGGGAAAGGATTTTACTGCTTTTTACTGCTCCGAACCGAAGATACAAGGTGCTGGAGGAATATCATGCAACCTTTCTAGAAACTGTCCCCTTCAAAACAATTGCCACTTTCACCTTGTTTCAGACAGTATATTTGCTGATGTGTTTTGGTTTAACCTGGATTCCAATTGCTGGTGTTCTGTTTCCATTGTTGATCATGCTTCTTGTCCCTGTGCGGCAGTATTTGCTTCCCAAGTTCTTCAAAGGTGCTCATCTCCAGGACTTGGATGCTGCTGAATATGAGGAAGCTCCTGCAATCGCTTTTAATCCATCATTCGAAGATCGAATGGGAAGAACTCCCAATATTGATGATGGTGAAATACTTGACGAGATGATCACAAGAAGCCGTGGTGAGATTCGACGTACGCCAAGTTCAAAAGTGACAAGCTCATCCCCAACTACTCTAGAGGGCATCAAATCAATCTACAGTCCACAGATACCACAGAAACTTTATAGTCCAAGAATCAATGAGCTGAGAAGGGAGAGAAGTTCTTTATCTCCTGGAAAAGGACTTGATTTCAAGCTAAATGGCAGTCCTAGTCCTAGTCCTAGTGAAGAACCAGGGCCAGGACCTTCTTTTAGAAATTAG 2160 44.07 MEETFFPFRGIKNDIRGRLLCYRQDWTGGLRTGIRILAPTTYIFFASAIPVISFGEQLERNTYGTLTAVQTLASTALCGIIHSVFGGQPLLILGVAEPTVLMYTFMFDFAKDRKELGQELFLAWTGWVCVWTAILLFLLAVLGACSLINRFTRVAGELFGLLIAMLFMQQAIRGVVEEFGIPQRENPNQVSLQAPWRFGNGMFALVLSFGLLLTALKSRKARSWRYGTGCLRGFIADYGVPLMVLIWTALSYIPVNNVPLGIPRRLFSPNPWSQGAYSNWTVIKEMLRVPPLYIVGAFIPATMIAVLYYFDHSVASQLAQQKEFNLKKPASYHYDLLLLGFLVILCGLIGIPPANGVIPQSPMHTKSLATLKHQLLRSKLVAAARQSFRKNSNLSQFYQNMQEAYNGMQTPLIYQNPPVAGLKELKDSTIQLASRTGYIDAPVDETVFDVDKDIDDLLPVEVKEQRLSNLLQAVMVGGCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPNRRYKVLEEYHATFLETVPFKTIATFTLFQTVYLLMCFGLTWIPIAGVLFPLLIMLLVPVRQYLLPKFFKGAHLQDLDAAEYEEAPAIAFNPSFEDRMGRTPNIDDGEILDEMITRSRGEIRRTPSSKVTSSSPTTLEGIKSIYSPQIPQKLYSPRINELRRERSSLSPGKGLDFKLNGSPSPSPSEEPGPGPSFRN* 720
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 17230913 17235346 - Chy12G218650.1 Chy12g01265 239046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01265 719 PANTHER ANION EXCHANGE PROTEIN 1 692 IPR003020 GO:0005452|GO:0006820|GO:0016020
Chy12g01265 719 MobiDBLite consensus disorder prediction 677 719 - -
Chy12g01265 719 MobiDBLite consensus disorder prediction 638 658 - -
Chy12g01265 719 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Chy12g01265 719 Pfam HCO3- transporter family 202 373 IPR011531 GO:0006820|GO:0016021
Chy12g01265 719 Pfam HCO3- transporter family 460 550 IPR011531 GO:0006820|GO:0016021
Chy12g01265 719 Gene3D Helical hairpin bin 18 60 - -
Chy12g01265 719 PANTHER BORON TRANSPORTER 2-RELATED 1 692 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01164 Chy-Chr4:17853799 Chy12g01265 Chy-Chr12:17230913 0 dispersed
Chy04g01183 Chy-Chr4:18172826 Chy12g01265 Chy-Chr12:17230913 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01265 K24194 - csv:101203606 1402.11