Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01291 ATGGCTTTCCCTTTCCCTTTCCCTTTACTTTTCCTCGTTACCATCATCCTCCCTTTCCCATCTCTTGTTCATTCCAAACTCTCCCTCGGTTATTACCAAAAAACATGTCCCGACTTTGAGAAGATTATTCGTGAAACTGTCACCAATAAACAAATAACCAGTCCTGTCACCGCTGCAGGAACCCTTCGCCTCTTCTTCCATGACTGTATGGTTGATGGTTGTGATGCTTCCGTTCTCATTTCCTCCAACTCCTTCAACCAAGCTGAGCGTGAGGCTGAAATCAACCACTCCCTTTCTGGTGACGCCTTCGATGTCGTCGTCCATGCTAAGACCAACCTCGAACTCGCATGCCCTGGCATTGTGTCTTGTTCTGACATCTTGGCACAGGCAACTCGAGATCTAGTAGTGATGGTGGGAGGACCATTCTACAACGTTCGATTGGGGAGAAAAGACGGAATGATATCAAAAGCAGGCAATGTGGAAGGGAACCTCCCAACAGTGAACTTCACAATGGACAAACTCGTCGATTACTTCGTCGAAAGAGGCTTCACCGTCCAAGAACTGGTCGCCCTCTCCGGCGGTCACACCATCGGTTTCTCCCACTGCAAGGAATTCACCGACCGACTCTTCCACTATAGTCCCACGTCACCCACCGACCCGGACATATACCCAAAATTCGCCGAAAAGCTAAAGGCCATGTGTGCCAATTACGAAAAAGACACCGCCATGTCAGCTTTCAACGACGTCATAACACCTGGCAAATTCGACAATATGTTCTACCAGAATCTGCCACGTGGGCTAGGCCTACTGGCCACTGACAACGCCCTCAATAAGGATCCAAGGACGAAGCCGTTTGTGGATCTTTACGCTGTTAACCAAACGGCGTTTTTTCACGACTTTGGTCGCGCTATGGAGAAGCTCAGTGTTCACGGCGTTAAGACGGGAAGAAAGGGGGAGGTTCGACGAAGGTGTGACCTTTTTAATTCTATTAATACATGA 999 48.75 MAFPFPFPLLFLVTIILPFPSLVHSKLSLGYYQKTCPDFEKIIRETVTNKQITSPVTAAGTLRLFFHDCMVDGCDASVLISSNSFNQAEREAEINHSLSGDAFDVVVHAKTNLELACPGIVSCSDILAQATRDLVVMVGGPFYNVRLGRKDGMISKAGNVEGNLPTVNFTMDKLVDYFVERGFTVQELVALSGGHTIGFSHCKEFTDRLFHYSPTSPTDPDIYPKFAEKLKAMCANYEKDTAMSAFNDVITPGKFDNMFYQNLPRGLGLLATDNALNKDPRTKPFVDLYAVNQTAFFHDFGRAMEKLSVHGVKTGRKGEVRRRCDLFNSINT* 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 17389527 17390940 + Chy12G218910.1 Chy12g01291 239072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01291 332 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01291 332 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01291 332 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01291 332 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01291 332 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01291 332 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01291 332 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01291 332 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01291 332 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01291 332 SUPERFAMILY Heme-dependent peroxidases 27 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy12g01291 332 Pfam Peroxidase 45 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g01291 332 ProSiteProfiles Plant heme peroxidase family profile. 26 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g01291 332 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g01291 332 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g01291 332 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g01291 332 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g01291 332 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g01291 332 CDD secretory_peroxidase 26 327 IPR033905 GO:0004601|GO:0042744
Chy12g01291 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Chy12g01291 332 PANTHER PEROXIDASE 41 9 332 - -
Chy12g01291 332 PANTHER - 9 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g01291 332 Gene3D - 30 328 - -
Chy12g01291 332 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Chy12g01291 332 Gene3D Peroxidase, domain 2 165 307 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g00234 Chy-Chr11:2187809 Chy12g01291 Chy-Chr12:17389527 9.50E-92 dispersed
Chy12g00902 Chy-Chr12:14426837 Chy12g01291 Chy-Chr12:17389527 5.56E-90 transposed
Chy12g01291 Chy-Chr12:17389527 Chy02g02553 Chy-Chr2:28790326 3.36E-153 wgd
Chy12g01291 Chy-Chr12:17389527 Chy04g01488 Chy-Chr4:21546024 4.22E-142 wgd
Chy12g01291 Chy-Chr12:17389527 Chy09g00313 Chy-Chr9:2677518 7.17E-134 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01291 K00430 - csv:101220163 653.669