Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01321 ATGGGTGTGCTCGTTTTGGTTGTTTCATCGTTTTTACTATCAACCCTTTTCAGCATTTGTACTTTTGCTCTCACCCCAGATGGCTTAACGTTGTTGGAAATTAGAAGAGCGTTTAATGATAGCAAAAACCTCCTTGGTGATTGGGAAGCTTCGGATGAGTTTCCCTGTAAATGGCCTGGTATATCTTGTCATCCTGAGGACCAACGGGTTAGCTCAATTAACTTACCTTACATGCAACTTGGAGGGATCATTTCTCCCAGCATTGGTAAACTCAGTAGATTACAGAGACTTGCACTTCATGAAAATGGCTTACATGGAAATATTCCTAACGAAATCACTAAATGTACTCAGCTCAGAGCTCTGTATTTGAGGTCTAATTATCTTCAAGGTGGCATACCTTCTGATATCGGAAGCCTTTCTGCTCTTACAATACTGGATTTGTCAAGCAATGCATTAAAGGGTGCTATTCCATCATCCATTGGTCAACTCTCGCTTTTGCGTCATTTGAATTTGTCCACAAATTTTTTCTCTGGGGAAATACCTGATTTCGGAATTCTAAGCACATTTGGAAGCAATTCCTTAGATGATTTCTTGCATGAACATGGACCAGAAAGACAGCCTTTGGATTGGAGAGCTCGTCTTAGGATAGCCTTTGGCTCTGCTAGGGGGATTGCATACTTGCATCATGATTGTTGTCCAAAGATCGTACATCGTGATATTAAATCGAGTAACATTCTACTTGATGAAAACTTGGTGCCCCATGTATCTGACTTTGGACTGGCCAAGCTTTTGGTTGACGATGATGCTCATGTCACAACTGTAGTTGCTGGAACTTTTGGTTATTTGGCTCCAGAATATCTGCAAAGTGGGAGGGCAACTGAAAAATCAGATATTTATAGCTTTGGAGTCTTATTACTGGAGCTGGTGACTGGGAAGAGACCAACGGATCCATCATTTGTAAAGCGAGGCCTAAATGTTGTTGGTTGGATGCACATATTATTGGGAGAAAACAAAATGGATGAGATAGTTGACAAAAGGTGCAAGGACGTTGATGCCGATACTGTAGAAGCAATTCTTGAAATAGCAACCAAATGCACAGATGCCGACCCAGACAATCGGCCATCAATGAGTCAAGTTTTACAGTTTCTTGAGCAAGAAGTCATGTCACCTTGTCCTAGTGATTTCTATGAGTCTCAGTCTGATTATTCTTGA 1212 41.17 MGVLVLVVSSFLLSTLFSICTFALTPDGLTLLEIRRAFNDSKNLLGDWEASDEFPCKWPGISCHPEDQRVSSINLPYMQLGGIISPSIGKLSRLQRLALHENGLHGNIPNEITKCTQLRALYLRSNYLQGGIPSDIGSLSALTILDLSSNALKGAIPSSIGQLSLLRHLNLSTNFFSGEIPDFGILSTFGSNSLDDFLHEHGPERQPLDWRARLRIAFGSARGIAYLHHDCCPKIVHRDIKSSNILLDENLVPHVSDFGLAKLLVDDDAHVTTVVAGTFGYLAPEYLQSGRATEKSDIYSFGVLLLELVTGKRPTDPSFVKRGLNVVGWMHILLGENKMDEIVDKRCKDVDADTVEAILEIATKCTDADPDNRPSMSQVLQFLEQEVMSPCPSDFYESQSDYS* 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 17575644 17578832 + Chy12G219210.1 Chy12g01321 239102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01321 403 Pfam Protein tyrosine and serine/threonine kinase 188 383 IPR001245 GO:0004672|GO:0006468
Chy12g01321 403 PANTHER REPEAT FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 193 395 - -
Chy12g01321 403 PANTHER REPEAT FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 35 193 - -
Chy12g01321 403 Gene3D Ribonuclease Inhibitor 27 193 IPR032675 -
Chy12g01321 403 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 35 193 - -
Chy12g01321 403 SMART serkin_6 122 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g01321 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Chy12g01321 403 SUPERFAMILY L domain-like 26 184 - -
Chy12g01321 403 ProSiteProfiles Protein kinase domain profile. 94 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g01321 403 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Chy12g01321 403 SUPERFAMILY Protein kinase-like (PK-like) 163 384 IPR011009 -
Chy12g01321 403 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 193 395 - -
Chy12g01321 403 Gene3D Transferase(Phosphotransferase) domain 1 194 393 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g02519 Chy12g01321 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy12g01321 Chy-Chr12:17575644 Chy07g00573 Chy-Chr7:5018974 5.69E-45 dispersed
Chy08g00113 Chy-Chr8:2520754 Chy12g01321 Chy-Chr12:17575644 4.13E-42 transposed
Chy12g01321 Chy-Chr12:17575644 Chy02g02519 Chy-Chr2:28567627 1.73E-95 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71641 PF07714 PK_Tyr_Ser-Thr 1.20E-31 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01321 - - zju:107415641 572.778