Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01328 ATGGCGCCGGTTTTATCTCGGTTACTTCTCCGTCGGAATGTTCACACACCATTTCTTCGCACCTCCACCACCGCATTTAACTTTTTCAGAACAATTCATTCTACGGTTTTCTCCACTGTAGAAGTGGACCAAATATCAGGTTCTAAGCCAGGAGATGTTCTCAACTTGGTGCAGGGTAAATGGATTGGATCTTCCGGTTGGAATACTATTGTAGATCCTCTAAATGGAGAACCATTTATTAGAGTTGCCGAAGTCAACGAAACAGAGATTCAGCCATTTGTGAAGAGTCTGACCAAATGCCCCAAGCATGGCTTACACAATCCTTTCAAATCGCCTGAGAGATATTTGTTGTTCGGAGATGTATCTTCCAAGGCTGCCGACGTGCTTTCCAAGCCAGAGGTGACTGACTTCTTTGCAAGGCTAATTCAAAGAGTTTCTCCAAAAAGTTATCAGCAAGCTTGTGCTGAAGTAAATGTTACTGTTAAATTTCTACGGAACTTCTCTGGCGATCAGGTTCGCTTCCTAGCAAGGTCCTTTGCAGTACCTGGAGATCATCTTGGACAACAAAGTCATGGTTTCCGTTGGCCTTATGGTCCTGTTGCAATTATCACTCCTTTCAACTTTCCATTAGAAATTCCTGTACTTCAGTTGATGGGTGCACTTTACATGGGCAACAAACCCGTTTTAAAAGTCGATAGCAAGGTTAGCATTGTTATGGAGCAAATGATTCGATTGCTTCACCATTGTGGACTACCTCTAGAAGATTTAGATTTTATAAATTGTGATGGGAAGACCATGAACAAGTTTTTAATGGAGGCAAATCCATCCATGACTCTTTTCACCGGTAGCTCAAGGGTGGCAGATAAGTTAGCTGTTGACTTGAAGGGCCGCATTAAATTGGAAGATGCAGGTTTTGATTGGAAAGTCTTAGGACCAGATGTTCGAGAGGAAGACTATGTTGCATGGGTTTGTGATCAAGATGCATATGCTTGTAGTGGCCAAAAGTGTTCAGCACAGTCGATACTGTTTATGCATGAGAATTGGTCAACAACTACGCTTATTTCGAAGATAAAGGATCTTGCAGAGAGAAGAAATTTGACCGATTTAACAATTGGCCCAGTTCTTACATTGACAACGGAAGCGATACTAGATCACATGAATAAATTGCTCAAGATACCAGGGGCAAAGTTGCTTTTTGGGGGTGAACCACTAAAAAACCATTCTATTCCACCTGTATATGGCGCTATAAAACCCACTGCATTATATATTCCACTTGAAGAAATGATGAAAGATGAGAATTATGAACTCGTGACTAAGGAAATTTTTGGACCATTCCAGATTGTTACGGAATACAAGAGAGATCAACTTTCGGTTGTGTTGGATGCGCTTGAGCGAATGCATGCTCATCTAACTGCTGCTGTTGTTTCAAATGACCCTCTCTTTTTGCAGGAAGTTATTGGCAACACTGTGAATGGAACGACATATGTAGGTTTAAGAGCGAGAACAACGGGAGCTCCACAAAACCATTGGTTTGGACCTGCAGGAGACCCTAGAGGTGCAGGTATTGGAACCCCGGAAGCCATCAAACTCGTATGGTCTTGCCATAGAGAGATCATATATGATATTGGCCCATTGCCTTCGCATTGGACTGTTCCATCATCGACTTGA 1668 42.33 MAPVLSRLLLRRNVHTPFLRTSTTAFNFFRTIHSTVFSTVEVDQISGSKPGDVLNLVQGKWIGSSGWNTIVDPLNGEPFIRVAEVNETEIQPFVKSLTKCPKHGLHNPFKSPERYLLFGDVSSKAADVLSKPEVTDFFARLIQRVSPKSYQQACAEVNVTVKFLRNFSGDQVRFLARSFAVPGDHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMIRLLHHCGLPLEDLDFINCDGKTMNKFLMEANPSMTLFTGSSRVADKLAVDLKGRIKLEDAGFDWKVLGPDVREEDYVAWVCDQDAYACSGQKCSAQSILFMHENWSTTTLISKIKDLAERRNLTDLTIGPVLTLTTEAILDHMNKLLKIPGAKLLFGGEPLKNHSIPPVYGAIKPTALYIPLEEMMKDENYELVTKEIFGPFQIVTEYKRDQLSVVLDALERMHAHLTAAVVSNDPLFLQEVIGNTVNGTTYVGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDIGPLPSHWTVPSST* 556
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 17619479 17624144 - Chy12G219280.1 Chy12g01328 239109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01328 555 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 308 497 IPR016163 GO:0016620
Chy12g01328 555 Pfam Aldehyde dehydrogenase family 70 506 IPR015590 GO:0016491
Chy12g01328 555 SUPERFAMILY ALDH-like 55 523 IPR016161 GO:0016491
Chy12g01328 555 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 48 304 IPR016162 GO:0016491
Chy12g01328 555 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 26 554 IPR044638 GO:0004029
Chy12g01328 555 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 329 340 IPR016160 GO:0016491
Chy12g01328 555 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 12A1, MITOCHONDRIAL 26 554 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy12g01328 Chy-Chr12:17619479 Chy02g02570 Chy-Chr2:28916466 2.48E-15 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01328 K00294 - csv:101214440 1125.54