Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01355 ATGAAAAACTTTGCATTACTGTGTTTTCTTTTCATTGTCATTGCCTCATCTGAGGTACGCTTCTGCAGAGCGGACGCCTCCCCCGATGCGGTCCTCGACACCGACGGAAAGAAGCTTCGAGCCGGTGATCAATATTACATTCTCTCAGTTTACAACAGAAATAGCGGCGGATTAAGCATCGGCGGTATCTACGGATACGAAAAATGTCCCATCAACATCCTCCCCGAATCTTACGATTATTTACACGGTCTTCCGGCGACGTTTTCCCCCGTAAACCCTAAGAAAGGTGTGGTCCGAGTTTCTACCGATTTGAACATCCAATTCGAGGCGAACACGAGGTGTGGAATATCGACGGTGTGGAAAGTAGGTAAGTTTGATGAATACTTGAAGCAGTATTTTGTGATGATGGGCGGAACGAAAGGGAATCCGGGGTGGGAAACGATCGAAAATTGGTTCAAAGTGGAGAAGTATGGTAAGAATTATAAGTTGGTGTATTGTCCAACAGTTTGTAAGTATTGCAAAGTAATGTGCAAAGATGTGGGATTATTTTACAAGAATGGAAGGAGGGTTATTGCTTTGAATGATGCTCCATTCCCTGTTATGTTCAAGAAAGACTACACTATGGTTATGAAGAAATCTGCATTACTCACTTTTCTTTTCATTGCCATTGTCATTGCCTCATCTGAGTTACGCTTCTGCAGAGCTGATGCGTCACCGGATGCCGTCCTCGACACCGATGGAAAGAAGCTCAGAGTAAGCAACAACGGTGGTGGTGGAGGTTTAGCCATCGGCAATATCCGAAAAGAATACGATAGATGTGGTGTCAACGTCGTCCAGGAGCGTTACGAACAATTCGATGGTTTTCCCACGACATTTTTACCAAAGAACCTTAAAAAGGGTGTGGTTCGAGTCTCCACCGATTTGAACATCGAGTTTGATGGGACTACGAGGTGTGTGAAATCAACGGTGTGGAGATTAGGAACATTTGATCGATATTTGAGGCAATATTTCGTGACGATTGGCGGAACGAAAGGGAACCCGGGGCGAGAGACGACGGAAAATTGGTTCAAAATAGAGAAATATGGGAATGGTTACAAGTTGGTGTATTGTCCAAGAGTGGTGTGTAAGTATTGCAAAGTAATGTGCAAAGATATTGGTATATTCGAGAACAATGGGATAAGGGGTCTTGTTTTGAGCGATACGCCATTTCCCGTTATGTTCAAGAAACTGATCCGCTTCTCCACAGCCGACGCTTCGCCGGAGGCCGTCCTCGACATCGACGGCAAGAAGCTCCGAGCCGGCGTCAACTACTACATCCTCCCTGTTTTCCGCGGCAGAGGCGGCGGCCTAACCTTAGGCAACCTCCAATCAGAGAAATGTCCACTCAATGTCGTTCAAGAACAACTAGAAGTAATGAACGGATTTCCAACAACATTTCATCCTGTAAACCCTAAAAAAGGAGTGGTCCGAGTTTCAACCGATTTGAATGTACAATTCGAGGCGAGTACGATCTGCGTGACATCGACGGTGTGGAAATTGGACAAATTCGACGAATCAACAGGACAATGGTTGGTGACGATCGGCGGAAGCAGGGGAAATCCGGGAGTGGAGACGGTGGATAACTGGTTCAAAATTGAGAAGCATGGCAAGGATTACAAATTGGTGTTCTGTCCGACTGTTTGCAATTTCTGTAAAGTTATGTGTAGAGATATTGGAATCTTCTTCAAGAATGGAGAAAGGGCTTTGGCTTTGAGCGAGACGCCATTCCCTGTTATGTTCAAGAAAGTTTAA 1791 45.28 MKNFALLCFLFIVIASSEVRFCRADASPDAVLDTDGKKLRAGDQYYILSVYNRNSGGLSIGGIYGYEKCPINILPESYDYLHGLPATFSPVNPKKGVVRVSTDLNIQFEANTRCGISTVWKVGKFDEYLKQYFVMMGGTKGNPGWETIENWFKVEKYGKNYKLVYCPTVCKYCKVMCKDVGLFYKNGRRVIALNDAPFPVMFKKDYTMVMKKSALLTFLFIAIVIASSELRFCRADASPDAVLDTDGKKLRVSNNGGGGGLAIGNIRKEYDRCGVNVVQERYEQFDGFPTTFLPKNLKKGVVRVSTDLNIEFDGTTRCVKSTVWRLGTFDRYLRQYFVTIGGTKGNPGRETTENWFKIEKYGNGYKLVYCPRVVCKYCKVMCKDIGIFENNGIRGLVLSDTPFPVMFKKLIRFSTADASPEAVLDIDGKKLRAGVNYYILPVFRGRGGGLTLGNLQSEKCPLNVVQEQLEVMNGFPTTFHPVNPKKGVVRVSTDLNVQFEASTICVTSTVWKLDKFDESTGQWLVTIGGSRGNPGVETVDNWFKIEKHGKDYKLVFCPTVCNFCKVMCRDIGIFFKNGERALALSETPFPVMFKKV* 597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 17811645 17817536 + Chy12G219550.1 Chy12g01355 239136

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01355 596 PANTHER KUNITZ TRYPSIN INHIBITOR 2 214 409 IPR002160 GO:0004866
Chy12g01355 596 PANTHER KUNITZ TRYPSIN INHIBITOR 2 415 596 IPR002160 GO:0004866
Chy12g01355 596 PANTHER KUNITZ TRYPSIN INHIBITOR 2 7 204 IPR002160 GO:0004866
Chy12g01355 596 SUPERFAMILY STI-like 27 205 IPR011065 -
Chy12g01355 596 SMART kul_2 422 596 IPR002160 GO:0004866
Chy12g01355 596 SMART kul_2 241 411 IPR002160 GO:0004866
Chy12g01355 596 SMART kul_2 30 206 IPR002160 GO:0004866
Chy12g01355 596 CDD STI 241 409 IPR002160 GO:0004866
Chy12g01355 596 Pfam Trypsin and protease inhibitor 242 409 IPR002160 GO:0004866
Chy12g01355 596 Pfam Trypsin and protease inhibitor 31 204 IPR002160 GO:0004866
Chy12g01355 596 Pfam Trypsin and protease inhibitor 423 595 IPR002160 GO:0004866
Chy12g01355 596 ProSitePatterns Soybean trypsin inhibitor (Kunitz) protease inhibitors family signature. 31 47 IPR002160 GO:0004866
Chy12g01355 596 ProSitePatterns Soybean trypsin inhibitor (Kunitz) protease inhibitors family signature. 423 439 IPR002160 GO:0004866
Chy12g01355 596 Gene3D - 25 204 - -
Chy12g01355 596 Gene3D - 417 596 - -
Chy12g01355 596 PANTHER KUNITZ TRYPSIN INHIBITOR 2 214 409 - -
Chy12g01355 596 PANTHER KUNITZ TRYPSIN INHIBITOR 2 415 596 - -
Chy12g01355 596 PANTHER KUNITZ TRYPSIN INHIBITOR 2 7 204 - -
Chy12g01355 596 SUPERFAMILY STI-like 419 596 IPR011065 -
Chy12g01355 596 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 565 594 IPR002160 GO:0004866
Chy12g01355 596 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 542 561 IPR002160 GO:0004866
Chy12g01355 596 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 422 451 IPR002160 GO:0004866
Chy12g01355 596 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 460 480 IPR002160 GO:0004866
Chy12g01355 596 Gene3D - 239 411 - -
Chy12g01355 596 SUPERFAMILY STI-like 238 409 IPR011065 -
Chy12g01355 596 CDD STI 422 595 IPR002160 GO:0004866
Chy12g01355 596 CDD STI 30 204 IPR002160 GO:0004866
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01355 - - - csv:101207401 378.637
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01135 Chy-Chr5:15861257 Chy12g01355 Chy-Chr12:17811645 1.73E-09 dispersed
Chy12g01355 Chy-Chr12:17811645 Chy05g01134 Chy-Chr5:15838303 3.73E-31 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g941 . . . . . . . . . . . . . . . Cpe20g00182 . . . . . . . . . . . . . . . . . . . . . Chy12g01355 Cme12g01786 . . . . . . . . . . . Cma13g00957 . Car13g00794 . . . . . . . . . . Cla01g01457 Cam01g1524 Cec01g1565 Cco01g1610 Clacu01g1548 Cmu01g1438 Cre01g1360 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002445 5 4 0 5 2 1 1 1 1 1 1 1 1 3 3 0 1 2 1 1 1 2 1 3 8 2 1 1 1 6 61