Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01385 ATGCAAACCCAGATGGGAATTCGTTTCTTCTCTTTGTTTCTTTTCGGATTCTCTCTTTTACTCTCCACTGTGAAACCAGATCTTGCTTCTGATAGAACAGCTCTTTTGGCCCTTCGTTCTGCTGTGGGTGGCCGGACTCTTCTCCTCTGGAATGTGACTGATCAGAACACCTGTTCTTGGCCTGGGATTCAATGTGAGGACAATCGTGTCACTGTTCTTCGTCTCCCCGGAGCGGCGCTTTTCGGTCCATTACCGGTTGGGATTTTTGGGAACTTGACGCACCTTCGTACTCTTAGCCTTCGGCTCAATGCACTTTCCGGTCAGCTCCCGTCAGATCTCTCTGCCTGCATTAATCTTCGGAACCTCTATTTGCAAGGTAATGAGTTTTCAGGCCTTATTCCTGATTTCTTGTTCCAGCTTCCTGACCTTGTTCGTCTTAATTTGGCTTCCAATAACTTTTCTGGGGAGATCTCTTCTGGGTTCAACAATTTGACCCGTCTCAAGACTCTGTTCCTTGAGAAAAATCATCTCTCTGGGTTTATCCCGGACTTGAAGATCCCTCTGGATCAGTTCAATGTTTCTAACAATCAGTTAAATGGGTCGGTTCCTAAGGGATTGCAGTCGTTTTCTTCGAGTTCCTTTCTGGGGAATTCTCTCTGCGGGGGTCCTCTTGAAGCTTGCTCTGGTGATCTTGTTGTGCCGACAGGGGAGGTTGGCAACAATGGCGGCTCTGGACACAAGAAAAAGCTGGCAGGGGGAGCCATTGCTGGGATTGTAATTGGATCTGTACTGGCTTTTGTGTTGATTCTTGTAATCTTAATGCTTTTGTGCCGAAAGAAGAGTGCTAAGAAAACGAGTTCAGTCGATGTAGCCACAGTGAAGCATCCTGAAGTGGAAATTCAGGGCAGTAAGCCACCTGGTGAGATTGAAAATGGGGGTTACAGTAATGGTTATACTGTGCCAGCCACTGCTGCTGCTGCTTCGGCTGGAACAGTGGCGGCCGGGACTGCAAAAGGGGAAGTGAGTGCCAATGGTACTGGGACTAAAAAATTGGTGTTCTTTGGAAACAAAGGCGCTGGTAGGACTCCATTGAATTGGGAAATCAGGTCCGGAATTGCCCTTGGAGCTGCCCGTGCCATTGAATATCTGCATTCTCAAGGCCCTAATGTTTCCCATGGAAACATAAAATCTTCCAATATTCTTCTAACAAAATCTTATGATGCTCGAGTTTCTGATTTCGGTTTAGCACATCTTGTTGGACCACCTTCCACTCCCACCAGAGTTGCTGGTTACCGTGCGCCAGAGGTCACCGATCCCCGTAAAGTATCCCACAAGGCTGATGTCTATAGCTTTGGCGTATTGCTTTTGGAGCTTTTGACAGGAAAGGCTCCTACACATTCCCTTTTAAACGAGGAAGGAGTTGATCTACCTAGATGGGTGCAGTCAGTTGTTAGGGAAGAGTGGACTTCCGAAGTTTTTGACCTCGAGCTTCTTAGGTACCAAAATGTTGAGGAGGAGATGGTTCAACTATTGCAACTTGCAGTCGATTGCGCAGCTCAGTATCCTGATAAGCGTCCCTCAATGTCGGAAGTCACAAAGCGTATAGAAGAGCTTCGCCAATCCAGCCTTCACGAAGCTGTCAATCCACAACCCGACGCTGCTCACGATTCAGACGATGCATCTTCTAGGTGA 1692 47.52 MQTQMGIRFFSLFLFGFSLLLSTVKPDLASDRTALLALRSAVGGRTLLLWNVTDQNTCSWPGIQCEDNRVTVLRLPGAALFGPLPVGIFGNLTHLRTLSLRLNALSGQLPSDLSACINLRNLYLQGNEFSGLIPDFLFQLPDLVRLNLASNNFSGEISSGFNNLTRLKTLFLEKNHLSGFIPDLKIPLDQFNVSNNQLNGSVPKGLQSFSSSSFLGNSLCGGPLEACSGDLVVPTGEVGNNGGSGHKKKLAGGAIAGIVIGSVLAFVLILVILMLLCRKKSAKKTSSVDVATVKHPEVEIQGSKPPGEIENGGYSNGYTVPATAAAASAGTVAAGTAKGEVSANGTGTKKLVFFGNKGAGRTPLNWEIRSGIALGAARAIEYLHSQGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPPSTPTRVAGYRAPEVTDPRKVSHKADVYSFGVLLLELLTGKAPTHSLLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPSMSEVTKRIEELRQSSLHEAVNPQPDAAHDSDDASSR* 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 18028647 18031219 + Chy12G219850.1 Chy12g01385 239166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01385 563 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Chy12g01385 563 Pfam Protein kinase domain 372 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g01385 563 Gene3D Transferase(Phosphotransferase) domain 1 353 559 - -
Chy12g01385 563 MobiDBLite consensus disorder prediction 539 563 - -
Chy12g01385 563 Gene3D Ribonuclease Inhibitor 28 186 IPR032675 -
Chy12g01385 563 PANTHER INACTIVE RECEPTOR KINASE-RELATED 11 355 - -
Chy12g01385 563 Gene3D Ribonuclease Inhibitor 187 230 IPR032675 -
Chy12g01385 563 SUPERFAMILY Protein kinase-like (PK-like) 360 542 IPR011009 -
Chy12g01385 563 PANTHER OS05G0588300 PROTEIN 11 355 - -
Chy12g01385 563 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Chy12g01385 563 PANTHER INACTIVE RECEPTOR KINASE-RELATED 355 558 - -
Chy12g01385 563 SUPERFAMILY L domain-like 30 211 - -
Chy12g01385 563 ProSiteProfiles Protein kinase domain profile. 244 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g01385 563 PANTHER OS05G0588300 PROTEIN 355 558 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy12g01385 Chy-Chr12:18028647 Chy06g01346 Chy-Chr6:13079193 1.04E-85 dispersed
Chy12g01385 Chy-Chr12:18028647 Chy09g01416 Chy-Chr9:15799984 1.89E-95 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71644 PF00069 Pkinase 1.10E-23 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01385 - - csv:101222458 632.484