Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01435 ATGGGGCTTTTGTCTTCTCTCTGCCTCTGCTTGCAGAAAAAACTTAAAGCTGCTAATTCTGCTGGTGCCGACGAAGCGGATGGTGAAGATGTGTCCACTGACATCTTCTTTGAACTGAATACTTTGCAAATTGCTACTAATTTCTTTTCCGAGATGAATAAGCTCGGCAATGGAGGGTTTGGGCCCGTCTACAAGGGTTTGATGCCAAATGGCCAACAAGTAGCAGTCAAGAAGCTGTCGATAGATTCTAGACAAGGAGTGAAGCAATTTAGTAATGAAGTGAAACTTCTACTGAGAATTCAGCACAGAAATTTGGTCATTTTATTGGGCTGTTGTGTGGAAGGACCTGAAAAGATGCTTGTATATGAATACCTGCCAAACAGAAGTCTTGATTACTTTATTTTTGATAAAAAGAAGTCTCCATCCCTGGATTGGACAACACGGTTCCATATAATTACAGGTATTGTGAGAGGTCTTCTCTACTTACATGAAGAGGCTCCTTCAAGAATTATACATAGGGATATCAAAGCTAGTAACATATTATTAGATGAGAAATTGAATCCAAAAATCTCAGATTTCGGACTAGCACGACTTTTTCCTGGAGAAGATACACATTTGAATACATTTAAGATCGCTGGTACTCATGGCTATATGGCTCCCGAGTATGCAATTCATGGATATTTATCTGTAAAGAGCGACATTTTCAGTTTTGGCATCTTGGTGTTGGAGATTGTTAGTGGAAGAAAAAATCACGACATTCGACTTGGTGCGCAACAAGTCGACCTCTTGGGATACGCATGGCTGCTTTATCAAGAAGGAAGGGTTTTAGAATTAGTCGACCAAAGCCTAACAAAATACAATGTAGATGAGGCAGCTATGTGCATACAGTTGGGCTTGTTATGTTGTCAAGCAAGTGTTTCAGATAGGCCTGATATGAATACTACTCATCTCATGCTTTCTAGTGATTCATTCACGTTGCCACGACCTGGAAAGCCAGGAATTCATGGTCGAGCACCACGTCGAACAACTACCACTACTTCGGCTTTCACCAAGACGAATACTAGTACACAAAGTGGGGTTACGAAAGCTTCTACTAGTAATAGTTTGATGGAAGATTATTCAAGGAATTCCATGTCCGTTTCTTCTTTTGATGAAGGCAGGTGA 1164 40.64 MGLLSSLCLCLQKKLKAANSAGADEADGEDVSTDIFFELNTLQIATNFFSEMNKLGNGGFGPVYKGLMPNGQQVAVKKLSIDSRQGVKQFSNEVKLLLRIQHRNLVILLGCCVEGPEKMLVYEYLPNRSLDYFIFDKKKSPSLDWTTRFHIITGIVRGLLYLHEEAPSRIIHRDIKASNILLDEKLNPKISDFGLARLFPGEDTHLNTFKIAGTHGYMAPEYAIHGYLSVKSDIFSFGILVLEIVSGRKNHDIRLGAQQVDLLGYAWLLYQEGRVLELVDQSLTKYNVDEAAMCIQLGLLCCQASVSDRPDMNTTHLMLSSDSFTLPRPGKPGIHGRAPRRTTTTTSAFTKTNTSTQSGVTKASTSNSLMEDYSRNSMSVSSFDEGR* 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 18358815 18362738 + Chy12G220350.1 Chy12g01435 239216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01435 387 Gene3D Transferase(Phosphotransferase) domain 1 125 325 - -
Chy12g01435 387 SUPERFAMILY Protein kinase-like (PK-like) 35 317 IPR011009 -
Chy12g01435 387 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 385 - -
Chy12g01435 387 Pfam Protein kinase domain 50 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g01435 387 MobiDBLite consensus disorder prediction 328 387 - -
Chy12g01435 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Chy12g01435 387 ProSiteProfiles Protein kinase domain profile. 49 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g01435 387 CDD STKc_IRAK 55 314 - -
Chy12g01435 387 MobiDBLite consensus disorder prediction 339 387 - -
Chy12g01435 387 Gene3D Phosphorylase Kinase; domain 1 12 124 - -
Chy12g01435 387 SMART serkin_6 49 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g01435 387 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 385 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g02355 Chy12g01435 CCT
Chy02g02355 Chy12g01435 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy12g01435 Chy-Chr12:18358815 Chy04g00612 Chy-Chr4:6894298 4.37E-115 dispersed
Chy12g01435 Chy-Chr12:18358815 Chy01g00394 Chy-Chr1:2800963 6.71E-116 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71653 PF00069 Pkinase 3.70E-44 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01435 - - csv:101214463 733.406