Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy12g01464 | ATGGGCAAAGAAGCTCTTGAAGATTGGAGGAGAACCAAACAGGATATGGAGATGAATAACAGGAAAGTGAAAGTACATATCGAAAATGGTGAGTTTGTTGAGACTAAATGGATGGACTTGAGAGTTGGGCATGTAGTTAAAGTGGAGAAGGATGAATTCTTCCCTGCTGATCTCATTTTACTTTCGTCGAGTTATGAGGAAGCGATTTGCTACGTCGAGACGATGAATCTTGATGGAGAAACAAATTTGAAACTGAAAAACGCATTAGAAGCAAGCTCGAACTTACATGAAGATTCAAGCTTCCAGAATTTCAAGGCTACAATAAAATGTGAAGACCCCAATGCCAATTTGTATTCCTTCGTAGGTAGTATGTTGCTCGAAGAACAACAACATCCCCTCAGCCCTCAACAACTTCTTCTTCGAGACTCAAAGCTTCGAAACACGGATTTTGTATACGGGGTGGTGATTTTCACTGGTCGCGATACAAAGGTTATTCAGAACTCAACTGATCCTCCTTCCAAGCGAAGCAAGATCGAGAAAAGGATGGATAAGATTGTGTTCTTTCTGTTTGCTGTCTTGGTTTTGTTATCAGTTATTGGGTCAATTTTCTTTGGTGTTAAGACTAGAGACGATTTAGAAAATGGAAGAGCTACGAGATG | 659 | 40.21 | MGKEALEDWRRTKQDMEMNNRKVKVHIENGEFVETKWMDLRVGHVVKVEKDEFFPADLILLSSSYEEAICYVETMNLDGETNLKLKNALEASSNLHEDSSFQNFKATIKCEDPNANLYSFVGSMLLEEQQHPLSPQQLLLRDSKLRNTDFVYGVVIFTGRDTKVIQNSTDPPSKRSKIEKRMDKIVFFLFAVLVLLSVIGSIFFGVKTRDDLENGRATRX | 220 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 18585746 | 18586492 | + | Chy12G220640.1 | Chy12g01464 | 239245 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy12g01464 | 220 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 3 | 209 | IPR023298 | - | |
| Chy12g01464 | 220 | Pfam | E1-E2 ATPase | 18 | 206 | - | - | |
| Chy12g01464 | 220 | Gene3D | - | 5 | 169 | - | - | |
| Chy12g01464 | 220 | SUPERFAMILY | Calcium ATPase, transduction domain A | 25 | 166 | IPR008250 | - | |
| Chy12g01464 | 220 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 1 | 219 | - | - | |
| Chy12g01464 | 220 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 1 | 219 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy10g00952 | Chy-Chr10:15072143 | Chy12g01464 | Chy-Chr12:18585746 | 7.02E-62 | dispersed | |
| Chy12g01464 | Chy-Chr12:18585746 | Chy08g00572 | Chy-Chr8:13285594 | 3.79E-07 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy12g01464 | K01530 | - | csv:101209427 | 410.223 |