Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01483 ATGAAGATGACGTGTGAGGAGAAAGTTAAGGAATTAGGTAATTACGTGGTGGCCGACCCTCCACCTCCACCTCCACATCTGGACTGGACTCCTTCAAAGCCGCCGGTGGCCAACTTGGCCGCAACAGTGACTATAACAAACTCTCAGACATACCGACATATCACGAGCCCTGGATGGACCTTGGGATGGGTATGGGCAAAGGGAGAGGTCATTTGGTCCATGCAGGGAGCTGAAGCTACTGATCAAGGAGATTGTTCCAGTTCCACGTTTACAGGAACTATACCACACAGTTGCAAAAGAGATCCATCAGTGGTTGACTTACTTCCTGGTGCTCCTTATAACAAACAGGTAGCTATGTGCTGCAAAGGTGGTGTTTTGACATCTTGGGGACAAGATCCTTTATCTGCTGTCTCTGCCTTCCAATTGACAGTTGGTCATTCCGGTAGTTCGAATAAGACAGTGAGACTTCCCAAGAATTTCACCTTGAATGGTCCAGGGCTGGGTTACACATGTAGCCAGGCAAAGATTGTGCCACCATCAGCTTTCTACTCATCTGATGGTCGTCGAAAAACTAATGCATTGAGTAAATATCACAACTACACCAAACCATAA 612 47.06 MKMTCEEKVKELGNYVVADPPPPPPHLDWTPSKPPVANLAATVTITNSQTYRHITSPGWTLGWVWAKGEVIWSMQGAEATDQGDCSSSTFTGTIPHSCKRDPSVVDLLPGAPYNKQVAMCCKGGVLTSWGQDPLSAVSAFQLTVGHSGSSNKTVRLPKNFTLNGPGLGYTCSQAKIVPPSAFYSSDGRRKTNALSKYHNYTKP* 204
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 18727904 18730515 + Chy12G220830.1 Chy12g01483 239264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01483 203 Pfam COBRA-like protein 41 197 IPR006918 GO:0010215|GO:0031225
Chy12g01483 203 PANTHER PROTEIN COBRA 39 197 IPR006918 GO:0010215|GO:0031225
Chy12g01483 203 PANTHER COBRA-LIKE PROTEIN 39 197 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g02401 Chy12g01483 CCT
Chy02g02401 Chy12g01483 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00751 Chy-Chr7:8109623 Chy12g01483 Chy-Chr12:18727904 1.14E-75 dispersed
Chy12g01483 Chy-Chr12:18727904 Chy01g00699 Chy-Chr1:5113736 4.07E-37 dispersed
Chy12g01483 Chy-Chr12:18727904 Chy02g02401 Chy-Chr2:27765988 1.25E-69 wgd
Chy12g01483 Chy-Chr12:18727904 Chy07g00750 Chy-Chr7:8105336 1.08E-69 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01483 - - csv:101203708 322.783