Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy12g01483 | ATGAAGATGACGTGTGAGGAGAAAGTTAAGGAATTAGGTAATTACGTGGTGGCCGACCCTCCACCTCCACCTCCACATCTGGACTGGACTCCTTCAAAGCCGCCGGTGGCCAACTTGGCCGCAACAGTGACTATAACAAACTCTCAGACATACCGACATATCACGAGCCCTGGATGGACCTTGGGATGGGTATGGGCAAAGGGAGAGGTCATTTGGTCCATGCAGGGAGCTGAAGCTACTGATCAAGGAGATTGTTCCAGTTCCACGTTTACAGGAACTATACCACACAGTTGCAAAAGAGATCCATCAGTGGTTGACTTACTTCCTGGTGCTCCTTATAACAAACAGGTAGCTATGTGCTGCAAAGGTGGTGTTTTGACATCTTGGGGACAAGATCCTTTATCTGCTGTCTCTGCCTTCCAATTGACAGTTGGTCATTCCGGTAGTTCGAATAAGACAGTGAGACTTCCCAAGAATTTCACCTTGAATGGTCCAGGGCTGGGTTACACATGTAGCCAGGCAAAGATTGTGCCACCATCAGCTTTCTACTCATCTGATGGTCGTCGAAAAACTAATGCATTGAGTAAATATCACAACTACACCAAACCATAA | 612 | 47.06 | MKMTCEEKVKELGNYVVADPPPPPPHLDWTPSKPPVANLAATVTITNSQTYRHITSPGWTLGWVWAKGEVIWSMQGAEATDQGDCSSSTFTGTIPHSCKRDPSVVDLLPGAPYNKQVAMCCKGGVLTSWGQDPLSAVSAFQLTVGHSGSSNKTVRLPKNFTLNGPGLGYTCSQAKIVPPSAFYSSDGRRKTNALSKYHNYTKP* | 204 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 18727904 | 18730515 | + | Chy12G220830.1 | Chy12g01483 | 239264 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy12g01483 | 203 | Pfam | COBRA-like protein | 41 | 197 | IPR006918 | GO:0010215|GO:0031225 | |
Chy12g01483 | 203 | PANTHER | PROTEIN COBRA | 39 | 197 | IPR006918 | GO:0010215|GO:0031225 | |
Chy12g01483 | 203 | PANTHER | COBRA-LIKE PROTEIN | 39 | 197 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy02g02401 | Chy12g01483 | CCT | |
Chy02g02401 | Chy12g01483 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy07g00751 | Chy-Chr7:8109623 | Chy12g01483 | Chy-Chr12:18727904 | 1.14E-75 | dispersed | |
Chy12g01483 | Chy-Chr12:18727904 | Chy01g00699 | Chy-Chr1:5113736 | 4.07E-37 | dispersed | |
Chy12g01483 | Chy-Chr12:18727904 | Chy02g02401 | Chy-Chr2:27765988 | 1.25E-69 | wgd | |
Chy12g01483 | Chy-Chr12:18727904 | Chy07g00750 | Chy-Chr7:8105336 | 1.08E-69 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy12g01483 | - | - | csv:101203708 | 322.783 |