Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01485 ATGGTTCGCCGGCCCCTGCACCACACACACTCAGTAGTCAGAATTGTTCAAGCATCGTCGTATCTTCCACGTCCAACAGGAAAGTTGGTAGAGTTCAGACATATAGGTTTGAAAATATTCAAACACGAATCAACAAGGAATCAAGTTCTTCCCAGAAATCAGTGGTCTGAACGAATAAGAGTTAAAGTCGGCATCGAGCAAGAAGAGGTTATTAAGTCTCCTCAGTGTCTTTTGGGTAGTGCCATGGAAGAAGAGATTGGAGAAGAATTCAAGAGGAGTGGTTTCACGTTCGATGAAGAGGAAGAGATTCTCCAGAAATGTGTCACGTTCTGTGTTAACTACAATCTAAAGCCTTCGGATATTGTTTCTAGCTGGGAGGTCTACTATCTCAACAGGCTATTAGATGGGTCAGTGGTTGAACTTGAACAGCTGGATGGGTTCTTACAACATTTACAGAATGAGCAAAAAGAAACAGTCATTAAAGGGGAACCGGATCTTCATGTTTACTCAAACAAAGATGTTGACGTGATTTTGAATGATGAGAACGAAGATCTAAATGAAGATATTCTTAAGACCCCAAATGGGAAATCGCAGAGCCTCTACAAAGAGCGATTGGATTTGACCCCTTACACGAACGAAGGCTTGTTCTCATCGGGAAAGCCTTCAAAGCATGAGACACCCTTTGGCCAAAGAACAGAAAAGTTTGTTGTGAGGTTCAACATTAATAGCATGCCTGATATGGTGAGTGCTGTAAAGGAAGATAATAGTGAGAATGATGAAGATGCAATCATCAAGAAGGTTCGTCCCCTACAAGGATGCTCATTGACAGTCCATGGATCAGGATTTGGACTTGAACCTAATTGCAGGTTCATGTATGACAAGGATGAAGATAGGTTTAATGCTCTTGATAACCGAATCATGAGACATGCTAAAGCTCTTGCTGCATCTGGGCTCTACGAGGAAGCAGTGGACCCAACAGTTGCTTCACAGAAAAGCATGTTTGCGGTGGGCATGATTTATTGTGATGGTGAAGGACACTTGAACGATAAGTCCATCTTGTTGCAAAGCAGTATCTCGCATTCAGGGGGACAGCGAGTTCGTCTAGAATTACAGAACCTAAGCCAATTTTCAATCTTTCCTGGCCAGGTAGTAGGTATTGAAGGGCATAATCCTAGTGGACACTGCTTGATTGCGTCCAAACTTGTAGATTCTTTTCCTTTGTCTGCCACTATAGACCCCATTCTGCCTCCAGCAAAGAAGATAGCTTTGAACCATGATGTTCAACCAATTAATCAATCTTCTACACCGTCAGAACTATCGATGATCATTGCGTCGGGCCCCTATACAACAACGGACAACTTATTGTTTGAGCCTTTGACTGAGTTATTAGCATATGCAAAAAGAAAAGTTCCCCAGCTACTAATATTGCTTGGACCATTTGTTGATTCTGAACATTCTGATATCAAGAGAGGAACTGTAGAGATGAGCTTTGAGGAAATTTTCAAATTTGAAGTTTTAAGAAGGGTACAAGATTATGCAGAACACATGGGTCCTGATGCGCGTGTGCTGTTGATGCCATCTACAAGGGATGCTAATCACGACTTTGCTTTTCCCCAGCCTGCGTTCGACATTCCATCTGATCTTAGACTTCAGATATCCAGTCCCCCAAACCCATGTATCTTGGAAGCAAATCAGGCAAAGATAGCCTGCTGCACGATGGATATTCTCAGACACCTCAGTGGAGAAGAGCTGTCAAGAAACCTAACAAAGGGAGGAACCAACGATCGCCTGAGCACACTTGCTAGTCATATTCTTCGCCAGCGCAGCTTTTATCCTCTATACCCTCCGGCCGAAGGAGTTCCACTGGACTTTTCACTTGCCCCACAAGCTCTTGACATCTCTGTAATACCTGATATTCTCATTCTTCCATCCGACATGAAACACTTCGTGAAGGTTATATCCCTTGGTGAAGGAGGTTCAGAGGAAGAGCAAGCAAGATGCGTATGTGTGAATCCTGGAAGATTGGCCAAGGGTGAAGGAGGGGGTACTTTTGTCGAGCTCAATTACTTCGGTAGGCCTGACCAGATAAATGCTTCGGTTGTCAGCATATGA 2112 43.51 MVRRPLHHTHSVVRIVQASSYLPRPTGKLVEFRHIGLKIFKHESTRNQVLPRNQWSERIRVKVGIEQEEVIKSPQCLLGSAMEEEIGEEFKRSGFTFDEEEEILQKCVTFCVNYNLKPSDIVSSWEVYYLNRLLDGSVVELEQLDGFLQHLQNEQKETVIKGEPDLHVYSNKDVDVILNDENEDLNEDILKTPNGKSQSLYKERLDLTPYTNEGLFSSGKPSKHETPFGQRTEKFVVRFNINSMPDMVSAVKEDNSENDEDAIIKKVRPLQGCSLTVHGSGFGLEPNCRFMYDKDEDRFNALDNRIMRHAKALAASGLYEEAVDPTVASQKSMFAVGMIYCDGEGHLNDKSILLQSSISHSGGQRVRLELQNLSQFSIFPGQVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDVQPINQSSTPSELSMIIASGPYTTTDNLLFEPLTELLAYAKRKVPQLLILLGPFVDSEHSDIKRGTVEMSFEEIFKFEVLRRVQDYAEHMGPDARVLLMPSTRDANHDFAFPQPAFDIPSDLRLQISSPPNPCILEANQAKIACCTMDILRHLSGEELSRNLTKGGTNDRLSTLASHILRQRSFYPLYPPAEGVPLDFSLAPQALDISVIPDILILPSDMKHFVKVISLGEGGSEEEQARCVCVNPGRLAKGEGGGTFVELNYFGRPDQINASVVSI* 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 18737859 18745278 - Chy12G220850.1 Chy12g01485 239266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01485 703 Pfam DNA polymerase alpha/epsilon subunit B 442 651 IPR007185 GO:0003677|GO:0006260
Chy12g01485 703 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 82 703 IPR016722 -
Chy12g01485 703 PIRSF DNA_pol_alpha_2 80 695 IPR016722 -
Chy12g01485 703 Gene3D - 597 700 - -
Chy12g01485 703 Gene3D - 420 596 - -
Chy12g01485 703 Gene3D - 80 158 IPR043034 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01485 K02321 - csv:101206268 1229.93