Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01486 ATGGCCAATAATCTCAATCTCTTCCTTTGTTTCCTTCTCTTTGTTTGTTTCTTCACTCTCTGCCTTAGCCCTGGTGGTCTAGCTTGGGCTCTAATTTCAAAGCCAAAAAACCAACCCATCATTCCTGGCCCTAGTGGCACTCCATTTCTTGGCCAAGTTTCAACCTTCACCAATTCCTTAACTCATAGACTCCTTGCTAATCTTGCTCATACCTTAAAGGCAAAGCCTTTAATGTCATTCTCAGTTGGGTTCACTCGTTTTGTGATTTCAAGCAACCCCATCACAGCCAAAGAGCTTTTGAATAGCTCAGCTTTTGCTGATCGTCCAATTAAAGAGTCAGCTTATGAGCTTTTGTTTCATAGAGCAATGGGGTTTGCTCCATATGGTGAATACTGGAGGAATCTAAGGAGAATTTCATCTACTTTTTTGTTTAGTCCTAAAAGGATTTGTGGCTTTGGGGTTTTGAGGGAGAGAATCGGGTTTAAAATGATGAAGGAAATTGAGGGTTTGATGGTGAAAAATGGGGAAGTTGAAGTTAGGAAACTTTTGCATTTTGGGTCGTTGAGTAATGTTATGGAGAGTGTGTTTGGGAAAAGTGTGGAGTTTGGTGATTGGGAGATTGAGGAATTAGTGAGTGAAGGGTATGATTTGCTTGGGAGTTTTAATTGGAGTGATCATTTTCCTGTTTTGGGTTGGTTGGATTTACAAGGTGTGAGAAAAAGGTGTAGAGTTTTGGTGGGTAAAGTTAATGTTTTTGTTGGGAAAATTATTGAAGAACATAGAATGAAGAGAAGGGTTATTGTTAGAGATGAAGAAAATAATAACAATGACAACAACCCTAATGATAATGAAGATGGAGATTTTGTTGATGTGTTGCTTGATTTGGAAAAGGAAAACAAACTCACTGACTCTGATATGATTGCTGTGTTATGGGAAATGATCTTTAGAGGAACAGACACAGTGGCAATTCTCCTAGAATGGATTTTAGCAAGAATGGTTCTTCATCCTGACATTCAAGCTAAACTTCAATCCGAAGTCGACCAAGTTGTGATGAAAACCGGTCGAAACATCTCGAATTTGGACCTCCCAAATCTCCCTTATCTCCATGCAGTCGTCAAAGAAACTCTTAGAATGCACCCTCCTGGCCCACTCCTCTCTTGGGCACGCCTTGCCATCCACGACACCCATGTCGCAGGCCACTTCATTCCTGCCGGCACCACGGCGATGGTCAACATGTGGGCCATAACCCATGACGACCAAATTTGGCTCGACCCAACAATATATAACCCAGACCGATTCATTAAAGATGACGTGGCTATAATGGGATCAGATCTACGACTCGCACCGTTTGGATCTGGTAGAAGGGTTTGTCCTGGTAAAGCAATGGGACTAGCCACTGTTGAACTATGGCTTGCTCAGTTGGTTCACAAGTTCGAATGGGTTCAAGCTTCTGACTCGAAAAACAAAGTGGATTTTTCTGAGTGTTTGAAGCTATCTCTGGAAATGAAACACCCTTTGATTTGTAAGGCTATCCCCAGGAACGATGTGGGGTTTGAGTCTAACCCATGA 1569 42.0 MANNLNLFLCFLLFVCFFTLCLSPGGLAWALISKPKNQPIIPGPSGTPFLGQVSTFTNSLTHRLLANLAHTLKAKPLMSFSVGFTRFVISSNPITAKELLNSSAFADRPIKESAYELLFHRAMGFAPYGEYWRNLRRISSTFLFSPKRICGFGVLRERIGFKMMKEIEGLMVKNGEVEVRKLLHFGSLSNVMESVFGKSVEFGDWEIEELVSEGYDLLGSFNWSDHFPVLGWLDLQGVRKRCRVLVGKVNVFVGKIIEEHRMKRRVIVRDEENNNNDNNPNDNEDGDFVDVLLDLEKENKLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKLQSEVDQVVMKTGRNISNLDLPNLPYLHAVVKETLRMHPPGPLLSWARLAIHDTHVAGHFIPAGTTAMVNMWAITHDDQIWLDPTIYNPDRFIKDDVAIMGSDLRLAPFGSGRRVCPGKAMGLATVELWLAQLVHKFEWVQASDSKNKVDFSECLKLSLEMKHPLICKAIPRNDVGFESNP* 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 18753705 18755699 - Chy12G220860.1 Chy12g01486 239267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01486 522 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01486 522 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01486 522 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01486 522 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01486 522 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01486 522 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01486 522 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01486 522 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01486 522 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01486 522 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01486 522 PANTHER CYTOCHROME P450 78A7-RELATED 6 513 - -
Chy12g01486 522 SUPERFAMILY Cytochrome P450 41 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01486 522 Pfam Cytochrome P450 42 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01486 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Chy12g01486 522 Gene3D Cytochrome P450 30 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g01486 522 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 513 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00785 Chy-Chr10:13895962 Chy12g01486 Chy-Chr12:18753705 0 dispersed
Chy11g01721 Chy-Chr11:23606621 Chy12g01486 Chy-Chr12:18753705 3.55E-169 dispersed
Chy12g01486 Chy-Chr12:18753705 Chy06g01855 Chy-Chr6:22335987 3.45E-75 dispersed
Chy11g00082 Chy-Chr11:930368 Chy12g01486 Chy-Chr12:18753705 5.11E-169 transposed
Chy12g01486 Chy-Chr12:18753705 Chy03g00721 Chy-Chr3:9676446 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01486 K20619 - csv:101203458 993.03