Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01523 ATGGGGTGTGTGAATACGAAGCAGGCGGTGTCTGTCACGCCTGCATTCGATCATTCCGGCGTGTTTCGAGATAATGAATCAACGGCGGTGGGGAACTCGGGTCGGAGCCGACTTGGGTTGGTGGGGGAGATTGAGAAGGTTTCGAAGCCCAAGGCTAAGGTGAAGAAGAAGAGTTCCAGTGAGTTTAATGGGGTTGGGAGTGAGTTTGGTGAGTCGGGGAGAGCGAGTTCAAATGGCGGAGGGAATGAAACTTTGAGCTTCAGATTGGGGAATTTGAACAAGTATATAGAAGGTGAACAAGTGGCGGCGGGTTGGCCGGCCTGGCTTAGCGCTGTCGCCGGTGAGGCCATTCAAGGTTGGGTTCCACTCCGGTCCGATGCCTATGAGAAGTTGGAAAAGATTGGACAAGGTACATATAGCAGTGTATTCCGAGCACGTGAACTTGAAACGGGAAGGATAGTTGCTTTAAAGAAGGTTCGATTCGACAATTTTGAGCCCGAAAGTGTTAGATTTATGGCACGAGAGATCATGATTCTCCGCGGACTCGATCACCCTAACATCATCAAATTGGAGGGCTTAATTACATCTCGTTTATCATGTAGCATTTACCTTGTGTTCGAGTACATGGACCACGACATTACTGGACTCTTGTCCTGTCCTGATATCACTTTTAGTGAATCACAGATTAAATGCTACATGAAACAATTGTTATCCGGGCTTGAGCATTGTCACTCACGTGGTGTGATGCATCGGGATATTAAAGGATCTAATCTTCTAGTCAATAATGAAGGAGTATTGAAGGTGGCTGATTTTGGATTGGCAAACTTCTGTAATTCTGGGCACCGGCAACCTCTAACTAGTCGTGTTGTCACTCTGTGGTATCGCCCTCCTGAACTTCTACTGGGTTCAACAGACTATAATGCATCTGTGGATCTTTGGAGTGTTGGCTGTGTTTTTGCAGAACTTCTAGTTGGGAAACCTATTCTTCAAGGAAGAACAGAGGTGGAACAGCTACACAAGATCTTCAAGCTTTGCGGCTCACCTCCTGATGAATACTGGAAAAAATCTAAACTTCCTCATGCCACTTTGTTCAAGCCGCAGCATCCTTATAATAATTGTTTACGGCAAACCTTTAAAGATCATCCTTCAACGACTGTGAACTTGTTAGAAACTCTTCTTTCCGTTGAACCATACAAGCGTGGAGTTGCCTCCTCTGCTCTCACATCTGAGTATTTCAGTACCAAACCGTATGCATGTGATCCATCAAGCATGCCTATATATCCACCTAACAAAGAGATTGATGCGAAACAAAGAGAGGAGACTAGAAGGAAGAAAGGTAGTGGAAGATCCCGTGGACTAGATAACAGAAGGTTAACGCGAAAGCATCTTGGAATCAGTAAATTGGCACCAGCAGAGGACTTATCAGTCTCAGCTCGAGATTTGCATAAAATTAGTATTAATGCACAAAATCTTAAAGAAGAGAAGGTTATCAAAGGTGTTGAGGCGGAAAAAATGTCTATGGATAAATTGGAAGAGACTATACATGTAAAGAATGCATCTCAAGGAGACATTCCCTTCTCTGGCCCCCTGCAAGTTTCGACATCAAGTGGTTTTGCATGGGCTAGACGACGAAGAGACGATGCCTCTATTAGATGTTATTCCAGATCAATTTCAAGAGGACACCTAATTAATGGACTGGAAGATTCTACTACATTGCATTCAATAAGCAATTTGGACTCTAAGATTCATGAAAAGAGTGACATGTCGTCCATCAGCCGATCAAGTTCCAAGGGCCATGAATCAAATGAGAGATCAAAGGTTGTGATAAGGAACCCGTGGGGCAAGTTCGAGCGTCCTGATTCCTTTGATACTTCGGATGAGTACCACTCACAGGAATTTGCAGCGGCATTGTATTTGCGAGATGAAAAGGAAGCCAAGAGGAAACAGCTGAGTTATCAGGACCAAGTGGACAAAGTTGAATATTCTGGGCCCTTGTTATCTCAATCTAGCAGAGTGGATGAACTGCTTGATAGACACGAGAGGCATATTCGACAGACAGTTAGAAGATCATGGTTCCAAAGAGAAAAGAAAGCAAATGGGGCAGTTATGTTAAAGGCCAAAGCAGAGCTTAAGCCACACATGGATTTGCCTCTTCCTTTGTCCTTATCTCCTTTGGTCTTGGAGGTGGATGAGTACAAAGTGTACTTGGCTAGCATTATACCAAAGCTGCAAGACCACTTTCCTGACGCATCTTTCATGGTGTTCAACTTTAGTGAACGAAAGAGGAAGACTAAAACTTCGGACATACTGTCTCAATATGGTATGACAGTGATGGAATATCCTCTTCAATATGAAGGGTGTTCCCTACTGCCATTGGAGATGATCCACCACTTCATTCGGTCGAGTGAAAGCTGGTTGTCATTGGAGAGACAGAAAAATGTACTGTTGATGAACTGTGAACGAGGAGGATGGCCAATCCTTGCTTTCATGCTTTCAGCCATTTTATTGTACCGTAAACAATATGAAGGGGAGCAGAAGACCCTTGAAATGGTCTACAGGCAAGCACCTAGAGAACTTTTCCAAGTCCTTTCCCCTGTAAACTCACAGCCTTCTCAAATGAGATATCTTCAGTACATTTCTAGGAGAAATCTAGGTTCTGATTGGCCTCCACCTGACGCACCTTTAATTTTAGACTGTCTGATACTTCGAGAACTTCCTATGCTTAATGGAGGAAAGGGATGGAGGCCTATCATACGCATTTACGGTCAGGATCCATTAACACCACGTAATAGAAGCCCAAAACTTGTTTTTTCAAGTGCAAAGATGGAAGGACATGATCGCCAGTATCTACAGGTAGCAAGCAGACTGGTAAAAGTGGATGTCCATTGTCACGTTCAAGGCGATGTTGTTCTTGAATGCATCCGTTTAAATGGAGATCTACTACGTGAGGAAGTGATGTTTAGAATTATGTTTCACACAGCATTTGTGCATTCAAACAGTTTGAAGCTCAATCGTGATGAGGTTGATGTTTTATGGGATGCCAGGGATCAGTTTCCTAAAGATTTTAGAGCAGAGGTACTTTTTCGGGATGCTGATCATGTTGTGCCAAACCACTCTACAACGGCAAGAAGTGATGATAAAATCGAAATTGAAAGCAACTCGACTGAGGAGTTTTTTGAAGTGGAGGAAATATTTAGCAATACTGTTGACGTGCAGGAAGTTAAGAAGGATTATGATGTTCAAATGGTACATACAAACGAAACAGATTATATTGACCATCAAGCAGTTTGGAAGGAGGATGCAGATCCTCCTACATTCCAACGCTGTAAATCATTTGGAGGGAGTCAAAATTTTGACAAGAAGATGGATTGTAACATTGAAGCAGTGAAGGACATTACTGTTGATGATATAGCTTTTAAGACAGCTGAAAAAGTGGACTCTGGTCTTCAAGTAGTGAAGGACATTGTTGTGGATTATGGAGATAAGAAGCCGAATCCTCTGCTATTTTCTGTTAATGTACTGAGACGTATGGCAATCAAGGAACTGATAGATGATGCTTACGACAAGTTGGAAGGGGTGCAGCATAAAGGCTACGGAGAGGATACTGCCATTGCACACTTAGAATCAAAACTTCCTTTGAAGAAGTTGGAAGCTGATGCTTGGAGGGTTGAATATGAGAAGTTGCAATCAGCTTCAAGGAAACAGCCGTCATCAACAGTTAAGATAACGAATCATACAACTGTAGCTAAACAGAAAACCAAACAACCAGAAGATCAGAACTTTCTTGTAAAACAGGCAAAACCAAATACTCTTTCTAGATGGATTTCACATGAGAAAGAATCTTGCACAAACTCCATGCATTTGTTTTATCCATCAACAAGACAAACTGTTGCCTCGCCAACATCTATCAGTTTTCCTACTAAAGATTCTTATTCATATTCGACTTCAAAATCTGCTGCTGATTCTGCTATTTCAGGACTGCTTCTGTCTGAGACAGCTGATGAACAAAAAAGTAACAAGACGACTCCTAAAAAATTTTTAAGTTCTGCAGCAGAGATTCTCACGAGTAAACCACAATCACCACTCGACTCCCCAAGACCATTGCCAAACACTGTTCTGCATCAAGATCCTACTCTTCCTCGATCTCCTACTACACTCCTACAGCCACCAGCTCTTCAGGCTAACACATCTTTCTTCCAGGCATCATCTCCCAAATCTTCTTTATCACCCTCTTCATATTTTCACAAAAATGCAAGATCTCCTCCTCCAGCTCCGCCTCCACCACCACCTCCACCTTCCAATCATGTTGCACCAAAAAATTCATTATTAGTGTGTGGAAATAAACCTAAACAAAATGCTCCACCAGCACCACCTCCACCTCCGATTCGTAGAGCTCACCCACAATTACCACTACCACGACCACTCCCTTCGCATGGAGCTCTGCTTTCTCCACGCCTATCAGATGCTGGAGCCTTGCCACCACCCCCACCCCCACCGCCACCTCCTCCAATTCAAAGGATAGCTCCTCCACATTTAACTCAGGGGCAACAGGCTTTAACAGCAACAGCCTGTGTTGTCTCATCTTCCCTGCCATCTCCAATATGTGAAGCACCATCACCTCCTCAACCCATAACTAGTCCTCTTCCAATGGTTCCTTCTTCATCCCAACCTTCAGGAGGTGTGAGTCCACACTTGGGAGCTAAAGGAGTAAGTTCTTCAACTGATATGAAAACAGCACCTACGGTGAGGGGACGTGGGTTCTTGCGATCAATGGGCATAGGGGTGGCTACTGCAGGGCCTCAGCGGTCATCATTGAAACCTCTGCACTGGAGCAAGGTAACTCGGGTACTACAAGGGAGCTTATGGGAAGAATTGCAAAGATGTGGAGAGTCTGAAAGTGTACCCGAATTTGATGTATCTGAGCTGGAGACACTTTTCTCTGTGATTGTCCCTAAGCCTATGGTTGATTCCGGAGGTAAATCTGGAGGACGAAGGAAGTCAGTTGGATCAAAATTGGACAAAGTTCACTTGATTGATCTTAGAAGGGCAAACAACACTGAAATCATGCTAACAAAAGTTAGGATGCCACTATCTGACATGATGGCAGCAGTACTCTCCATGGATGAGTCAGTATTAGATGTAGATCAAGTGGAAAATCTTATCAAATTTTGCCCCACCAAAGAAGAGATGGAGCTTCTCAAGGGATACTCTGGCGACAAGGATAAACTTGGAAAGTGTGAACAGTACTTTTTGGAGATGATGCAAGTTCCTCGTGTGGAATCGAAGTTAAGAGTGTTTTCTTTCAAGATTCACTTCAACTCTCAGATAGTAGAGTTCAAAAAAAGCCTAAACACTGTAAACTCTGTCTGTCAAGAGGTGAAGAATTCTCGCAAATTGAAGGAAATTTTGAAGAAAATTCTTTGCCTGGGAAATATGTTGAACCAAGGAACTGCTAGGGGTTCTGCAATTGGATTCAGGTTGGATAGTCTCTCAAAACTCACTGATACACGTGCTTCTAACAATAAGTTGACTCTCATGCATTATCTCTGTAAGGTCCTTGCTTCGAAGTCACCATCACTTCTTGATTTTCATCTGGACCTTGGTAGCTTGGAAGCTGCGTCTAAGATACTATTGAAATCTTTGGCAGAGGAAATGCAAGCAATAACAAAAGGATTGGAAAAGGTGAAGCAGGAACTGATTGCATCTAAAAGCGATGGCCCCATCTCTGAAAATTTTCGTAAGATATTGGAAGGATTTGTTACTCTTGCCGAGAGGGAGGTGGAATCTGTGACAGTTCTTTACTCAGTGGCGGGTAGAAATGCTGATGCACTTGCACTATATTTTGGTGAGGATCCTGCCCGTTGTCCGTTTGAACAAGGAGTATCGATACCTAACAAAGATCAATCCAGGGGTTGCAAAACTGGTACCCGAAATGTTGGAAAGATTCATTCTTTTAAACCTCACCAGAAATCTAACAAGAATGATACAAAACTGAGTTTGGAGCTGGCAGAAACTTTAGCCTCCCATAACGTTTAA 6036 43.19 MGCVNTKQAVSVTPAFDHSGVFRDNESTAVGNSGRSRLGLVGEIEKVSKPKAKVKKKSSSEFNGVGSEFGESGRASSNGGGNETLSFRLGNLNKYIEGEQVAAGWPAWLSAVAGEAIQGWVPLRSDAYEKLEKIGQGTYSSVFRARELETGRIVALKKVRFDNFEPESVRFMAREIMILRGLDHPNIIKLEGLITSRLSCSIYLVFEYMDHDITGLLSCPDITFSESQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGVLKVADFGLANFCNSGHRQPLTSRVVTLWYRPPELLLGSTDYNASVDLWSVGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPDEYWKKSKLPHATLFKPQHPYNNCLRQTFKDHPSTTVNLLETLLSVEPYKRGVASSALTSEYFSTKPYACDPSSMPIYPPNKEIDAKQREETRRKKGSGRSRGLDNRRLTRKHLGISKLAPAEDLSVSARDLHKISINAQNLKEEKVIKGVEAEKMSMDKLEETIHVKNASQGDIPFSGPLQVSTSSGFAWARRRRDDASIRCYSRSISRGHLINGLEDSTTLHSISNLDSKIHEKSDMSSISRSSSKGHESNERSKVVIRNPWGKFERPDSFDTSDEYHSQEFAAALYLRDEKEAKRKQLSYQDQVDKVEYSGPLLSQSSRVDELLDRHERHIRQTVRRSWFQREKKANGAVMLKAKAELKPHMDLPLPLSLSPLVLEVDEYKVYLASIIPKLQDHFPDASFMVFNFSERKRKTKTSDILSQYGMTVMEYPLQYEGCSLLPLEMIHHFIRSSESWLSLERQKNVLLMNCERGGWPILAFMLSAILLYRKQYEGEQKTLEMVYRQAPRELFQVLSPVNSQPSQMRYLQYISRRNLGSDWPPPDAPLILDCLILRELPMLNGGKGWRPIIRIYGQDPLTPRNRSPKLVFSSAKMEGHDRQYLQVASRLVKVDVHCHVQGDVVLECIRLNGDLLREEVMFRIMFHTAFVHSNSLKLNRDEVDVLWDARDQFPKDFRAEVLFRDADHVVPNHSTTARSDDKIEIESNSTEEFFEVEEIFSNTVDVQEVKKDYDVQMVHTNETDYIDHQAVWKEDADPPTFQRCKSFGGSQNFDKKMDCNIEAVKDITVDDIAFKTAEKVDSGLQVVKDIVVDYGDKKPNPLLFSVNVLRRMAIKELIDDAYDKLEGVQHKGYGEDTAIAHLESKLPLKKLEADAWRVEYEKLQSASRKQPSSTVKITNHTTVAKQKTKQPEDQNFLVKQAKPNTLSRWISHEKESCTNSMHLFYPSTRQTVASPTSISFPTKDSYSYSTSKSAADSAISGLLLSETADEQKSNKTTPKKFLSSAAEILTSKPQSPLDSPRPLPNTVLHQDPTLPRSPTTLLQPPALQANTSFFQASSPKSSLSPSSYFHKNARSPPPAPPPPPPPPSNHVAPKNSLLVCGNKPKQNAPPAPPPPPIRRAHPQLPLPRPLPSHGALLSPRLSDAGALPPPPPPPPPPPIQRIAPPHLTQGQQALTATACVVSSSLPSPICEAPSPPQPITSPLPMVPSSSQPSGGVSPHLGAKGVSSSTDMKTAPTVRGRGFLRSMGIGVATAGPQRSSLKPLHWSKVTRVLQGSLWEELQRCGESESVPEFDVSELETLFSVIVPKPMVDSGGKSGGRRKSVGSKLDKVHLIDLRRANNTEIMLTKVRMPLSDMMAAVLSMDESVLDVDQVENLIKFCPTKEEMELLKGYSGDKDKLGKCEQYFLEMMQVPRVESKLRVFSFKIHFNSQIVEFKKSLNTVNSVCQEVKNSRKLKEILKKILCLGNMLNQGTARGSAIGFRLDSLSKLTDTRASNNKLTLMHYLCKVLASKSPSLLDFHLDLGSLEAASKILLKSLAEEMQAITKGLEKVKQELIASKSDGPISENFRKILEGFVTLAEREVESVTVLYSVAGRNADALALYFGEDPARCPFEQGVSIPNKDQSRGCKTGTRNVGKIHSFKPHQKSNKNDTKLSLELAETLASHNV* 2012
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 18995713 19011992 + Chy12G221230.1 Chy12g01523 239304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01523 2011 Pfam Protein kinase domain 128 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g01523 2011 MobiDBLite consensus disorder prediction 1419 1436 - -
Chy12g01523 2011 ProSiteProfiles C2 tensin-type domain profile. 892 1031 IPR014020 -
Chy12g01523 2011 SMART it6_source 1595 2010 IPR015425 -
Chy12g01523 2011 Gene3D Protein tyrosine phosphatase superfamily 714 893 IPR029021 -
Chy12g01523 2011 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1493 1958 - -
Chy12g01523 2011 ProSitePatterns Protein kinases ATP-binding region signature. 134 157 IPR017441 GO:0005524
Chy12g01523 2011 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1595 1997 IPR015425 -
Chy12g01523 2011 Gene3D - 895 1029 - -
Chy12g01523 2011 PANTHER FORMIN-J 1454 1953 - -
Chy12g01523 2011 PANTHER FORMIN-J 723 1470 - -
Chy12g01523 2011 MobiDBLite consensus disorder prediction 55 80 - -
Chy12g01523 2011 MobiDBLite consensus disorder prediction 583 606 - -
Chy12g01523 2011 MobiDBLite consensus disorder prediction 1451 1474 - -
Chy12g01523 2011 MobiDBLite consensus disorder prediction 1355 1509 - -
Chy12g01523 2011 MobiDBLite consensus disorder prediction 1489 1508 - -
Chy12g01523 2011 Coils Coil 1878 1898 - -
Chy12g01523 2011 Pfam C2 domain of PTEN tumour-suppressor protein 891 1030 IPR014020 -
Chy12g01523 2011 MobiDBLite consensus disorder prediction 432 458 - -
Chy12g01523 2011 Gene3D Formin, FH2 domain 1597 1965 IPR042201 -
Chy12g01523 2011 SUPERFAMILY Protein kinase-like (PK-like) 122 418 IPR011009 -
Chy12g01523 2011 SMART serkin_6 128 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g01523 2011 SMART PTEN_C2_2 890 1030 IPR014020 -
Chy12g01523 2011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Chy12g01523 2011 Pfam Formin Homology 2 Domain 1601 1959 IPR015425 -
Chy12g01523 2011 MobiDBLite consensus disorder prediction 1233 1257 - -
Chy12g01523 2011 MobiDBLite consensus disorder prediction 60 80 - -
Chy12g01523 2011 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 893 1030 IPR035892 -
Chy12g01523 2011 MobiDBLite consensus disorder prediction 1535 1580 - -
Chy12g01523 2011 CDD STKc_CDK9_like 128 412 - -
Chy12g01523 2011 MobiDBLite consensus disorder prediction 422 458 - -
Chy12g01523 2011 MobiDBLite consensus disorder prediction 1965 1994 - -
Chy12g01523 2011 MobiDBLite consensus disorder prediction 1535 1550 - -
Chy12g01523 2011 Gene3D Transferase(Phosphotransferase) domain 1 211 450 - -
Chy12g01523 2011 Gene3D Phosphorylase Kinase; domain 1 115 210 - -
Chy12g01523 2011 MobiDBLite consensus disorder prediction 1551 1579 - -
Chy12g01523 2011 MobiDBLite consensus disorder prediction 1375 1416 - -
Chy12g01523 2011 ProSiteProfiles Protein kinase domain profile. 128 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g02475 Chy12g01523 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02115 Chy-Chr2:25463736 Chy12g01523 Chy-Chr12:18995713 1.03E-121 dispersed
Chy07g00331 Chy-Chr7:2686037 Chy12g01523 Chy-Chr12:18995713 3.42E-128 dispersed
Chy12g01147 Chy-Chr12:16403329 Chy12g01523 Chy-Chr12:18995713 2.85E-169 dispersed
Chy12g01389 Chy-Chr12:18052067 Chy12g01523 Chy-Chr12:18995713 0 dispersed
Chy12g01523 Chy-Chr12:18995713 Chy09g00032 Chy-Chr9:301478 6.24E-173 dispersed
Chy03g00968 Chy-Chr3:13215423 Chy12g01523 Chy-Chr12:18995713 2.24E-27 transposed
Chy04g00614 Chy-Chr4:6958354 Chy12g01523 Chy-Chr12:18995713 1.36E-51 transposed
Chy04g00807 Chy-Chr4:10513486 Chy12g01523 Chy-Chr12:18995713 1.04E-31 transposed
Chy04g00873 Chy-Chr4:11646717 Chy12g01523 Chy-Chr12:18995713 5.10E-29 transposed
Chy04g01020 Chy-Chr4:15124871 Chy12g01523 Chy-Chr12:18995713 1.62E-24 transposed
Chy10g00056 Chy-Chr10:1398601 Chy12g01523 Chy-Chr12:18995713 8.42E-27 transposed
Chy10g00942 Chy-Chr10:15003808 Chy12g01523 Chy-Chr12:18995713 8.46E-30 transposed
Chy11g00585 Chy-Chr11:6671338 Chy12g01523 Chy-Chr12:18995713 1.09E-28 transposed
Chy12g01523 Chy-Chr12:18995713 Chy02g02475 Chy-Chr2:28320742 0 wgd
Chy12g01523 Chy-Chr12:18995713 Chy09g00218 Chy-Chr9:1828875 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71655 PF02181 FH2 3.50E-105 No_clan Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01523 - - csv:101221127 2247.24