Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01529 ATGAACCGGACATTCAATTCATACCCAGATGAAAACTATGCGAATGTTAGGAGATCCATGAGGCAGACTGAGGATGATCATCACAAGAACCTATCGGACAAGGATCCGCACTTTGATTTCAAGAGCAACCATGAATTGAAATTTGGGTTCAGTTCGATTCGAGTAATGGGTATGTTTGTGGTTCTGATGATGTTCATTTCTGTGATATTTTCGGTCTCGGTGGTTTTTAGAGATCCACCGTCGGATGCTGTAATTGAAGGTTCAGATGTGTGGATTCCTCAGTGGAGTTCTGACCCAGTAGATTCTAAGGTTGGAGATCTTCAAGCAGTTGTACAGCCAGTTGATAAGCTGCTTAGTGGCCTTCTTTCTGCCAAACATGTGGTTGGTTCTTGTCTCAGTAGGTACAATTCAGTTGCTTATCAACACAAGCTGGCTTACGAACCCTCTTCTTACTTACTCTCCAAATTGCGGGGTTATGAAGATCTTCATAAGCGTTGTGGAGTTCATACTGAATCTTACAACAAAACTTTGGAGCAGCTTAGGTCTAATGGTAGTAGCAGCTCCTCAGACTGTAAATATCTTCTGTGGATTTCCTTCAGTGGATTAGGGAATAGAATACTAACCCTTGCTTCAGCGTTTCTTTATGCTCTCCTCACAAATCGCGTTCTTCTTGTTGACCCTGGAACTGACATGGCTGATCTTTTCTGTGAACCATTTCCTGAGGTTTCTTGGTTTCTTCCCCAAGATTTCCCATTAAAAGATGACTTCAGTAGTTTCAACCAGAACTCTCCTAATTGCTATGGGAAACTAATGAAGAATAGCATAACGCCAGATTCAAGTGGAATGATCTTGCCATCTGTTGTTTATCTTCATTTGGTCCATGATTACGACGATGATGATAAGCTTTTCTTCTGTGATCAAGACCAAGCTCTTCTGCAGCAATCTCCTTGGCTTGTTATGAAAACAGACAATTATTTTGTCCCATCTCTCTTTTTGATCCCATCATTCGAGAAAGAACTGCATGATCTTTTCCCAAATAAAGATACAGTTTTCCACTGCTTGGGTCGATATCTGTTCCACCCCACAAATTCGGTTTGGGGACTGATTACGAGATATTATCACGCTTACTTGGCTAGAGCTAATGAAAGAATAGGCATTCAGATTAGAGTGTTTGATACAGGAACTGGACCTTTTCAACACATTCTGGATCAGGTTCTGGACTGCACCATGAAAGAGAATCTGTTGCCACAAACGGAGAGGCAAACGTATGCCATTGATCCAGTTAGTAATCAAAAGTCAAAAGCGGTGCTGGTAACTTCCTTGAGCGCTGGTTACTTTGAGAAGTTAAGAGATATTTACTGGGAGAATCCAACAGTAACGGGGGAGATAATTAGTTTCTACCAACCAAGTCATGAAGAACACCAGCAAACTGAAAAAAGTATACATAACCAGAAGGCATTGGCAGAGATGTATTTGTTAAGTACAACTGATGTATTGGTCACCAGTTCATGGTCGACCTTTGGATACGTGGCTCAAGGTCTTGGTGGTCTGAAGCCATGGATATTGTACAAACCCGAAAATCGCACTGCACCAGATCCACCTTGCCGTCGAGCCATGTCCATGGAGCCTTGTTTCCATGCACCTCCTTTCTATGACTGCAAGGCTAAGAAAGGAGTGGACACTGGTAAACTTGTTCCTCATGTGAGGCACTGTGAGGACATGAGCTGGGGACTTAAGTTGGTTGATGATCCATATGATTGA 1761 42.36 MNRTFNSYPDENYANVRRSMRQTEDDHHKNLSDKDPHFDFKSNHELKFGFSSIRVMGMFVVLMMFISVIFSVSVVFRDPPSDAVIEGSDVWIPQWSSDPVDSKVGDLQAVVQPVDKLLSGLLSAKHVVGSCLSRYNSVAYQHKLAYEPSSYLLSKLRGYEDLHKRCGVHTESYNKTLEQLRSNGSSSSSDCKYLLWISFSGLGNRILTLASAFLYALLTNRVLLVDPGTDMADLFCEPFPEVSWFLPQDFPLKDDFSSFNQNSPNCYGKLMKNSITPDSSGMILPSVVYLHLVHDYDDDDKLFFCDQDQALLQQSPWLVMKTDNYFVPSLFLIPSFEKELHDLFPNKDTVFHCLGRYLFHPTNSVWGLITRYYHAYLARANERIGIQIRVFDTGTGPFQHILDQVLDCTMKENLLPQTERQTYAIDPVSNQKSKAVLVTSLSAGYFEKLRDIYWENPTVTGEIISFYQPSHEEHQQTEKSIHNQKALAEMYLLSTTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPDPPCRRAMSMEPCFHAPPFYDCKAKKGVDTGKLVPHVRHCEDMSWGLKLVDDPYD* 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 19032616 19035241 + Chy12G221290.1 Chy12g01529 239310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01529 586 Gene3D - 188 241 - -
Chy12g01529 586 Pfam Xyloglucan fucosyltransferase 104 554 IPR004938 GO:0008107|GO:0016020|GO:0042546
Chy12g01529 586 PANTHER FUCOSYLTRANSFERASE 2-RELATED 31 582 IPR004938 GO:0008107|GO:0016020|GO:0042546
Chy12g01529 586 Gene3D - 368 532 - -
Chy12g01529 586 PANTHER 2-ALPHA-L-FUCOSYLTRANSFERASE, PUTATIVE-RELATED 31 582 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01059 Chy-Chr7:15537493 Chy12g01529 Chy-Chr12:19032616 1.66E-179 dispersed
Chy10g01025 Chy-Chr10:15563589 Chy12g01529 Chy-Chr12:19032616 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01529 K13681 - csv:101219153 1154.43