Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01582 ATGGACTTTGGCGGTGGCTCCGGTTGGGACAACGATCCCTCCTCCGACCCTCAACGCAGAAAAAAACGCTACCATCGTCACAATGCCAACCAGATTCAGAGACTCGAAGCAATGTTCAAAGAATGCCCACACCCAGATGAGAAGCAGAGATTACAGTTAAGTAGAGAACTGGGATTGGCTCCTCGACAAATCAAATTTTGGTTCCAGAATCGGAGGACCCAGATGAAGGCTCAACATGAAAGGGCAGATAATAGTGCACTTCGAGCAGAGAACGACAAGATTCGATGCGAGAACATAGCCATCAGAGAGGCACTCAAAAATGTTATTTGTCCTTCCTGCGGTGGCCCTCCCCTTCAGGACCCCTACTTCGACGAGCATAAACTTCGAATCGAAAACGCCCATTTGAAAGAAGAGCTTGATAGAGTATCTAGCATTGCAGCCAAGTATATTGGGAGGCCAATCTCTCAACTTCCACCCATTCAACCTTCTCATTTCTCCTCCTTGGAACTGTCCATGGGTAGTTTTCCCTCCCAAGAAATGGGATGTCCTTCTCTTGATCTTGATTTACTTTCTGCAAGTTCTACAAGTGTTCCTAATTTACCATACCATCATCCAATTCACCTATCCTCCGTGGATAAGTCTCTCATGACTGAAATTGCCACAAATGCCATGGCAGAGTTGCTTAGGCTTTCCCAAACTAATGAGCCTTTCTGGATGAAATCGCCAACTGATGGTCGTGACCTTCTCGACCTTGAAACCTATGAACATGCTTTTCCAAGACCCAACACTCCCTTGAAGAATCTACATTTTCGCACCGAAGCATCAAGAGACTCAGGTGTCGTGATCCTAAGTAGTGCAGCATTGGTTGACATTTTTATGGACTCGAACAAATGGACAGAGTTATTTCCCACAATTGTCTCAATTGCAAGAACACTTGAAGTTGTATCGTCCGGGATGTTGGGAAGTCCGAATGGCTCCTTGCAACTGATGTACCAAGAATTGCAGCTACTCTCCCCATTGGTTCCAACTCGTCACTTTTACTTCATCCGGTATTGTCAACAAATCGAGCAGGGTGTGTGGGCTGTGGTTGATGTTTCCTACAATATTCCCAGGGAAAACCAAATAGTTTCTCATCCTCAATGTCACCGCTTTCCCTCTGGTTGCTTGATCCAGGACATGCCTAATGGTTACTCTAAGGTTACTTGGATTGAGCATGTAGAAGTGGAAGATAGAGGCTCGACTCATTGGCTTTTTAGAGATCTTATTCATAGTGGGTTAGCGTTTGGTGCTGAACGGTGGCTTGCAACTCTTCAGCGGATGTCTGAAAGGTTTGCCTGTTTAATGGTGACTAGTAGTTCCAATCAGGATCTTGGCGGAGTAATTCCATCTCTAGAAGGAAAAAGGAGCATGATGAAACTAGCACAACGAATGGTAAACAATTTTTGTGCTAGTATCAGCACATCTCATGGACACCGTTGGACCACCCTTTCTGGGATGAATGAGGTTGGTGTTCGTGTCACGGTGCATAAAAGCACAGATTCTGGCCAACCTAATGGTGTGGTTCTTAGTGCAGCTACAACCATTTGGCTCCCAGTTTCCCCTCAAACCATCTTTAACTTCTTTAAGAACGACAGAACCAGATCCCAGTGGGATGTTCTCTCGGATGGCAATCCACTTCAAGAGGTTGCTCATATATCCAACGGATCCCACCCAGGGAATTGCATATCTGTTCTCAGAGCTTTCAATACAAGTCAGAACAACATGTTGATTCTCCAAGAGAGTTGCATAGACTCATCAGGGTCACTTGTTGTGTACTGCCCAGTGGATCTACCAGCCATGAATGTTGCAATGAGTGGGGAGGACCCATCAAGTATTCCTTTACTACCTTCGGGATTCACAATTTTACCAGACGGTCGACGGGACCAAGGAGAGGGTGCATCGAGCAGCTCAGACGTGCATAACAGGTCAGGGGGTTCGCTGGTGACGGTTGCATTTCAAATACTAGTAAGCAGCTTGCCATCTGGGAAGCTGAACTTGGAGTCAGTGACAACGTGGCGGGGGATTTGGCAATTGGCACTGCAGCTGCACAGTGGGACTTGGAGCTCTTTCATAAAGCAGAAGAGGCACAGAGACAGAGAAGCTTACAGAACATTGGCCATGGCGTTCTGTACACCTGTTAACAACTACTCTGTAGTTTCTTCTTTTCTTTATAGTAATTCTTCGGCGACGCAAAAGAGAGCAAGACGGTTTTGTATTTGTGCCAAGAACAAAAGCAACGCCAGTTCGTTGCAGTACAGAAAACTTGGGGACTCTGACCTTCAAGTTTCGGAAGTTACGCTTGGAACGATGACTTTTGGGCAACAAAACACCGAGACAGAAGCTCATGAACAACTGAATTACGCTTATGAGCATGGAATCAATATTATAGATACCGCAGAGGCATATCCAGTTCCAATGAAACAAGAGACACAGGGAAGGACCGACATTTACATTGGTAACTGGCTCAAATCAAAGCCCAGAGATAAGATTATTTTGGCGACAAAAGTCTGTGGATACTTGGAGCAATCCACTTATTTGCGTGAAAATGCAAAGGCCATACGGGTTGATCGTGCCAATATCAGAGAAAGTGTAGAGAAAAGTCTCAAGCGGCTGAACACTGACTACATTGACTTACTGCAAATTCACTGGCCAGACCGGTATGTTCCCCTATTTGGGACTTTTGTTTATGATTCTTCGAAATGGAGGCCAAGTGTGCCTTTTATAGAGCAGCTGAAGGCATTTCAGGAACTTATCGAAGAAGGAAAGATACGCTATATTGGTGTTTCAAATGAGACTTCATATGGAGTGATGGAATTTGTTCACGCAGCAAAAATTGAAGGATTGCCAAAGATCGTTAGTATCCAAAATAATTACAGTCTTATTAATAGATGCCGCTTTGAAGTCGATCTTGTTGAGGTTTGTCATCCAAACAACTGCAATGTTGGCTTGCTTGGTTATTCTCCTTTGGGTGGTGGAACGCTTAGTGGCAAATACTTGGATGTCAATTATCAAGATTCAGGAAAAGGAAGGCTGAACCTCTTCCCCGGCTTCATGGATAGATACAATAAATCTATTGCCAAGGATGCAATAACTGAATACGTGCAGTTGGCCAAAAAGTATGGCCTAACTCCAGTACAGCTTGCACTTGGGTTTGCTCGAGACCGTCCATTTATGACGAGTTCTATCATTGGCGCAACTTCCATGGACCAGCTTAGAGAAGACCTCGATGCTTTCACAATGACCGAGCGGCCATTGCCTGCAGAAGTGTTGGAAGACATTGAAGCCATTTTCCGAAGATACAAAGATCCAGCTATCTAG 3357 44.98 MDFGGGSGWDNDPSSDPQRRKKRYHRHNANQIQRLEAMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMKAQHERADNSALRAENDKIRCENIAIREALKNVICPSCGGPPLQDPYFDEHKLRIENAHLKEELDRVSSIAAKYIGRPISQLPPIQPSHFSSLELSMGSFPSQEMGCPSLDLDLLSASSTSVPNLPYHHPIHLSSVDKSLMTEIATNAMAELLRLSQTNEPFWMKSPTDGRDLLDLETYEHAFPRPNTPLKNLHFRTEASRDSGVVILSSAALVDIFMDSNKWTELFPTIVSIARTLEVVSSGMLGSPNGSLQLMYQELQLLSPLVPTRHFYFIRYCQQIEQGVWAVVDVSYNIPRENQIVSHPQCHRFPSGCLIQDMPNGYSKVTWIEHVEVEDRGSTHWLFRDLIHSGLAFGAERWLATLQRMSERFACLMVTSSSNQDLGGVIPSLEGKRSMMKLAQRMVNNFCASISTSHGHRWTTLSGMNEVGVRVTVHKSTDSGQPNGVVLSAATTIWLPVSPQTIFNFFKNDRTRSQWDVLSDGNPLQEVAHISNGSHPGNCISVLRAFNTSQNNMLILQESCIDSSGSLVVYCPVDLPAMNVAMSGEDPSSIPLLPSGFTILPDGRRDQGEGASSSSDVHNRSGGSLVTVAFQILVSSLPSGKLNLESVTTWRGIWQLALQLHSGTWSSFIKQKRHRDREAYRTLAMAFCTPVNNYSVVSSFLYSNSSATQKRARRFCICAKNKSNASSLQYRKLGDSDLQVSEVTLGTMTFGQQNTETEAHEQLNYAYEHGINIIDTAEAYPVPMKQETQGRTDIYIGNWLKSKPRDKIILATKVCGYLEQSTYLRENAKAIRVDRANIRESVEKSLKRLNTDYIDLLQIHWPDRYVPLFGTFVYDSSKWRPSVPFIEQLKAFQELIEEGKIRYIGVSNETSYGVMEFVHAAKIEGLPKIVSIQNNYSLINRCRFEVDLVEVCHPNNCNVGLLGYSPLGGGTLSGKYLDVNYQDSGKGRLNLFPGFMDRYNKSIAKDAITEYVQLAKKYGLTPVQLALGFARDRPFMTSSIIGATSMDQLREDLDAFTMTERPLPAEVLEDIEAIFRRYKDPAI* 1119
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 19332505 19342702 + Chy12G221820.1 Chy12g01582 239363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01582 1118 SMART START_1 218 443 IPR002913 GO:0008289
Chy12g01582 1118 Pfam START domain 219 442 IPR002913 GO:0008289
Chy12g01582 1118 Gene3D - 217 444 IPR023393 -
Chy12g01582 1118 SUPERFAMILY NAD(P)-linked oxidoreductase 763 1114 IPR036812 -
Chy12g01582 1118 Pfam Homeodomain 21 76 IPR001356 GO:0003677
Chy12g01582 1118 MobiDBLite consensus disorder prediction 1 26 - -
Chy12g01582 1118 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 6 685 - -
Chy12g01582 1118 SUPERFAMILY Bet v1-like 465 679 - -
Chy12g01582 1118 ProSiteProfiles 'Homeobox' domain profile. 18 78 IPR001356 GO:0003677
Chy12g01582 1118 SMART HOX_1 19 82 IPR001356 GO:0003677
Chy12g01582 1118 CDD homeodomain 21 79 IPR001356 GO:0003677
Chy12g01582 1118 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 6 685 IPR042160 -
Chy12g01582 1118 SUPERFAMILY Homeodomain-like 7 78 IPR009057 -
Chy12g01582 1118 ProSitePatterns 'Homeobox' domain signature. 53 76 IPR017970 GO:0000981|GO:0006355
Chy12g01582 1118 Pfam Aldo/keto reductase family 777 1109 IPR023210 -
Chy12g01582 1118 ProSiteProfiles START domain profile. 209 446 IPR002913 GO:0008289
Chy12g01582 1118 SUPERFAMILY Bet v1-like 212 444 - -
Chy12g01582 1118 Gene3D - 763 1118 IPR036812 -
Chy12g01582 1118 CDD START_ArGLABRA2_like 213 442 - -
Chy12g01582 1118 CDD AKR_Tas-like 775 1109 - -
Chy12g01582 1118 Gene3D - 9 94 - -
Chy12g01582 1118 PRINTS Aldo-keto reductase signature 927 944 IPR020471 GO:0016491
Chy12g01582 1118 PRINTS Aldo-keto reductase signature 879 897 IPR020471 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00119 Chy-Chr4:1065219 Chy12g01582 Chy-Chr12:19332505 0 dispersed
Chy06g01010 Chy-Chr6:7677758 Chy12g01582 Chy-Chr12:19332505 0 dispersed
Chy06g01427 Chy-Chr6:15041888 Chy12g01582 Chy-Chr12:19332505 1.07E-86 dispersed
Chy12g01045 Chy-Chr12:15645774 Chy12g01582 Chy-Chr12:19332505 0 dispersed
Chy12g01582 Chy-Chr12:19332505 Chy11g02014 Chy-Chr11:25991815 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18917 PF00248 Aldo_ket_red 2.10E-69 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01582 K09338 - csv:101215660 1365.9