Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01586 ATGACAACCCTTGATAATATACAAAGAGAAAAAGTGACTTACGAAAATCCTCACTCCATAGCTGCTACTACGGCAATGGTACAGAATAAGAAAGAGGAAACAAATGATGACATCGCTGTAGTAAAAAAGTTTGTATTCTTCGACAATACAGCTAGGGTTTTTGATTTGGAGGATTTGTTGAGGGCTTCAGCAGAAGTGTTGGGCAAGGGAACCTTTGGAACAGCTTACAAAGCAGTCTTGGAGATTGGACCTGTGGTCGCTGTAAAGAGATTGATGGATGTGACCATTTCTAAGAGAGAATTCAAGGAGAAAATTGAAGCAGTTGGAGCAATGGATCATAAAAATTTGGTTCCTCTCAAAGCATATTATTTCAGTGTAGATGAGAAGCTTCTGGTTTTTGATTACATGGCCATGGGAAGCTTATCCGCACTTTTGCACGGTAACAAAAGATGTGGTAGGACACCATTGAACTGGGAAATGAGACGTGGCATTGCATCCGGAGTAGCTCGTGGCATCAAGTACTTACATTGTCAAGGCCCAAATGTTTCTCATGGAAACATAAAGTCTTCCAACATATTGCTTGATCCGTATGATGCCCGAGTCTCAGATTTCGGCCTAGCGCAACTGGTTGGCCCAGCCTCCAGTCCTAACAGAGTGGCGGGGTATCGTGCACCAGATGTAATAGATTCTCGGAAAGTATCACATAAGGCAAATGTTTACAGCTTCGGCGTATTGCTGTTGGAGCTGTTGACAGGAAAAGCTCCAAGTCATAGGGTGTTAAGCGAGGAAGGGGTGGATCTACCGAGATGGGTGCAGTCAGTAGTGCAAGAAGAGTGGAAGTTGAAAGTTTTCGATGTTGAACTACTAAAGTACGAGAGTGTTGAGGAGGAGATTGTTCAAATATTGGAGCTGGCTTTAGATTGTGCTACTCAACATCTAGATAGACGGCCTTCAATGTTTGAAGTATTGAGTCGCATTGAGGAGATATTATGCCCTTACAATCCAATTCAATAA 1014 42.7 MTTLDNIQREKVTYENPHSIAATTAMVQNKKEETNDDIAVVKKFVFFDNTARVFDLEDLLRASAEVLGKGTFGTAYKAVLEIGPVVAVKRLMDVTISKREFKEKIEAVGAMDHKNLVPLKAYYFSVDEKLLVFDYMAMGSLSALLHGNKRCGRTPLNWEMRRGIASGVARGIKYLHCQGPNVSHGNIKSSNILLDPYDARVSDFGLAQLVGPASSPNRVAGYRAPDVIDSRKVSHKANVYSFGVLLLELLTGKAPSHRVLSEEGVDLPRWVQSVVQEEWKLKVFDVELLKYESVEEEIVQILELALDCATQHLDRRPSMFEVLSRIEEILCPYNPIQ* 338
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
12 19388379 19389869 + Chy12G221860.1 Chy12g01586 239367
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01586 337 ProSitePatterns Protein kinases ATP-binding region signature. 67 89 IPR017441 GO:0005524
Chy12g01586 337 Pfam Protein kinase domain 64 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g01586 337 SUPERFAMILY Protein kinase-like (PK-like) 65 331 IPR011009 -
Chy12g01586 337 ProSiteProfiles Protein kinase domain profile. 61 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g01586 337 Gene3D Phosphorylase Kinase; domain 1 22 135 - -
Chy12g01586 337 PANTHER INACTIVE RECEPTOR KINASE-RELATED 18 329 - -
Chy12g01586 337 Gene3D Transferase(Phosphotransferase) domain 1 136 333 - -
Chy12g01586 337 PANTHER OS05G0588300 PROTEIN 18 329 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g01173 Chy-Chr11:17853820 Chy12g01586 Chy-Chr12:19388379 4.51E-108 dispersed
Chy12g01586 Chy-Chr12:19388379 Chy10g01166 Chy-Chr10:16515367 1.35E-101 dispersed
Chy12g01586 Chy-Chr12:19388379 Chy06g01272 Chy-Chr6:11694990 8.96E-97 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71656 PF00069 Pkinase 3.60E-36 CL0016 Chy PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01586 - - csv:101215185 619.772