Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g01587 ATGACTAACATTACAGGATGCTATGGATCATCATGGGGATTTTCTGAAGGATTAAGAAATTTAGATTTCTGTACGCCAGAGCCCTCTTATGATTGTGAAAATCCAAAGGAGTCTGAATCTCCTCGCTTTCAAGCTATACTCCGAGTCACAAGTGCTCCTCGAAGAAAGTATCCTGCTGACATCAAAAGTTTTTCCCACGAACTAAATTCGAAAGGCGTACGACCTTTCCCACTTTGGAAGTCACGTCGTTTAAATAATTTGGAGGAGATCTTAGTTATGATACGAGCAAAATTTGACAAGGCCAAGGAAGAAGTAAATTCTGACTTGGCTATTTTTGCTGCTGATCTGGTTGGAGTTCTTGAGAAAAATGTTGATACTCATCCAGAGTGGCAAGAGACAATTGAAGACTTGTTGGTTTCAGCTCGAAGCTGTGCAATGTCATCCCCTGGTGAATTTTGGCTTCAGTGTGAAAGCATTGTTCAGGAATTGGATGATAGACGCCAAGAACTTCCTCCTGGCATGCTGAAACAACTTCATACTCGAATACTGTTCATTCTCACTAGATGTACCAGGTTGCTGCAGTTCCATAAAGAAAGTGGGTTAGCTGAAGATGAAAATGTTTTTCAACTTCGTCAGTCAAGAAATCTGCATTCTGCTGATAAACGCACGGCTCCGGCTATGGGAAGGGAAATGAAAAGTTCTAGCGCAGCCAAGGCTTCGAAGGGAACATCTTCCAGGAAATCTTACAGCCAGGAGCAGCGTGGTTTGGATTGGAGCAGAGAACATGATATACTGCCTGGGAATAATGTTTCAACATCTCCTGATGATACTTCAAAGAACTTGGTATCTCCTACTGGCAGAGATCGGATGGCATCTTGGAAAAGATTGCCTTCTCCAGCAAAAAGCAGCGTGAAAGAATCTACTTTGAAGGTTCAGGGTGATAATAAAAAATTTAAATCTCTGAACATGTCAAAAATCAGGATGAGTGTTTCTGAAACTGATTTTGCTGCTGCTAAGGTTTCTGAGCTTCCTCTGCCCAGAGATTCGCATGACCAACCTACAAAGCACCAACATAAACCTTCTTGGGGTTGGGGTGATCAACCAACTGTATCTGATGAGAGTTCAATAATTTGTCGAATTTGTGAAGAAGAAATTCCTACTGCAAATGTGGAAGATCATTCAAGAATTTGTGCAGTTGCTGATAGATGTGATCAAAAGGGTATAAGTGTTAATGAACGTCTACTCAGAATTGCTGAAACTTTAGAGAAGATGATCGAGTCTTTTACACAGAAGGATTCTCAGCATGTAGGAAGTCCGGATGTTGCAAAAGTTTCAAATTCTAGCATGACCGAAGAATCTGATATTTCCCCAAAACATAGTGATTGGTCCCGCAGGGGCTCAGAAGACATGCTAGATTGCTTCCATGAAACTGATAGTTCTGTATTTATGGATGACTTAAAAGGTTTACCTTCCATGTCTTGTAAAACTCGTTTTGGTCCAAAGTCTGATCAAGGTATGACAACATCATCGGCTGGTAGCATGACTCCTAGATCTCCTTTATTAACACCAAGAACCAGTCAGTTTGACTTGTTTTTGGCAGGAAAAGGTGCTTACTATGAACATGACGATCTTACGCAGATCAGTGATTTGGCAGATATTGCACGTTGTTCAGCTAATACACCTCTGGGGGATGATTGCTCGATGCAGTATCTGCTAACATGCCTTGAAGACTTGAGAGTTGTCATTAACCGCAGGAAGTTTAATGCACTGACAGTTGACACTTTTGGCACTCGCATTGAAAAGTTAATCCGGGAGAAATATTTGCAACTTTGTGAGCTGGTGGATGATGAAAAGATCGACATAGCAAGCACTGTCATTGATGAAGATACTCCTCTTGAAGATGACATTGTTCGTAGCTTAAGAACTAGTCCCATCCATTCTTCAAAGGATCGTACATCAATTGATGACTTTGAGATTATAAAACCAATCAGCCGTGGGGCATTTGGTCGGGTTTTCTTGGCTAAAAAGAGGACTACGGGGGATCTTTTTGCAATAAAGGTTTTGAAGAAAGCGGATATGATTCGGAAGAACGCCGTCGAAAGTATTTTGGCAGAACGTAATATTTTAATTTCTGTGCGCAATCCTTTTGTGGTTCGCTTCTTCTACTCTTTTACTTGTCGTGACAATTTGTATCTTGTGATGGAGTATTTGAATGGAGGAGACCTTTACTCTTTGTTGAGAAATTTGGGCTGCTTAGATGAAGAGGTTGCTCGTGTATATATCGCAGAAGTTGTTCTTGCATTGGAGTATTTGCATTCACTTGGGGTTGTTCATCGGGACTTAAAGCCTGATAATTTATTAATAGCACATGATGGCCATATTAAGCTGACAGATTTTGGGCTTTCCAAGGTTGGTCTAATCAACAGTACTGATGACTTGTCTGGACCAGCTGTTAGTGGGACCACTCTTCTTGGCTATGATGAGCCTACCATGTCTGCTTCTGAGCATCAACAAGAAAGACGGAAAAAACGTTCTGCTGTTGGCACACCAGACTATTTGGCACCAGAGATACTATTAGGAACTGGACACGGCGCCACAGCTGACTGGTGGTCTGTTGGGATCATTTTATTTGAACTTATTGTTGGCATTCCACCCTTCAATGCAGAGCATCCCCAGACTATATTTGATAACATTCTCAATCGTAAGATCCCTTGGCCTCAAATACCTGAAGAGATGAGCCATGATGCTCAAGATTTAATTGACCGATTATTGACGGAAGATCCCCACCAGCGACTTGGAGCTATAGGTGCATCAGAGGTGAAACAACATATGTTCTTCAAAGATATAAACTGGGACACGCTTGCCCGACAAAAGGCTGCATTTGTTCCAACATCTGAAAGTGCTCTCGATACTAGTTATTTTACAAGTCGCTATTCATGGAATCATTCAGATGATCATGTCTATCCACACAGTGAACTTGAGGATTCGAGTGATGCCGATAGCTTGAGTGGTGATAGTTGTTTGAGCAATCGTCAAGATGAAGTGGGAGATGAATGTGGGGGTCTTACAGATTTTGAGCCTGGTGCTTCTGTCAATTACTCATTCAGTAATTTCTCTTTCAAGAATCTCTCCCAGCTCGCATCCATCAACTATGACCTGCTTTCCAAGGGTTTGAAGGATGATCCTCCCAATCATGATGCATAA 3204 41.67 MTNITGCYGSSWGFSEGLRNLDFCTPEPSYDCENPKESESPRFQAILRVTSAPRRKYPADIKSFSHELNSKGVRPFPLWKSRRLNNLEEILVMIRAKFDKAKEEVNSDLAIFAADLVGVLEKNVDTHPEWQETIEDLLVSARSCAMSSPGEFWLQCESIVQELDDRRQELPPGMLKQLHTRILFILTRCTRLLQFHKESGLAEDENVFQLRQSRNLHSADKRTAPAMGREMKSSSAAKASKGTSSRKSYSQEQRGLDWSREHDILPGNNVSTSPDDTSKNLVSPTGRDRMASWKRLPSPAKSSVKESTLKVQGDNKKFKSLNMSKIRMSVSETDFAAAKVSELPLPRDSHDQPTKHQHKPSWGWGDQPTVSDESSIICRICEEEIPTANVEDHSRICAVADRCDQKGISVNERLLRIAETLEKMIESFTQKDSQHVGSPDVAKVSNSSMTEESDISPKHSDWSRRGSEDMLDCFHETDSSVFMDDLKGLPSMSCKTRFGPKSDQGMTTSSAGSMTPRSPLLTPRTSQFDLFLAGKGAYYEHDDLTQISDLADIARCSANTPLGDDCSMQYLLTCLEDLRVVINRRKFNALTVDTFGTRIEKLIREKYLQLCELVDDEKIDIASTVIDEDTPLEDDIVRSLRTSPIHSSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRDNLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLGVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGYDEPTMSASEHQQERRKKRSAVGTPDYLAPEILLGTGHGATADWWSVGIILFELIVGIPPFNAEHPQTIFDNILNRKIPWPQIPEEMSHDAQDLIDRLLTEDPHQRLGAIGASEVKQHMFFKDINWDTLARQKAAFVPTSESALDTSYFTSRYSWNHSDDHVYPHSELEDSSDADSLSGDSCLSNRQDEVGDECGGLTDFEPGASVNYSFSNFSFKNLSQLASINYDLLSKGLKDDPPNHDA* 1068
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 19391094 19418918 - Chy12G221870.1 Chy12g01587 239368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g01587 1067 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 6 1065 - -
Chy12g01587 1067 MobiDBLite consensus disorder prediction 265 285 - -
Chy12g01587 1067 MobiDBLite consensus disorder prediction 429 463 - -
Chy12g01587 1067 Gene3D Transferase(Phosphotransferase) domain 1 741 964 - -
Chy12g01587 1067 MobiDBLite consensus disorder prediction 430 453 - -
Chy12g01587 1067 ProSiteProfiles Protein kinase domain profile. 657 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g01587 1067 Coils Coil 84 104 - -
Chy12g01587 1067 Pfam Protein kinase domain 657 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g01587 1067 CDD STKc_MAST_like 663 951 - -
Chy12g01587 1067 MobiDBLite consensus disorder prediction 989 1010 - -
Chy12g01587 1067 ProSiteProfiles AGC-kinase C-terminal domain profile. 947 1050 IPR000961 GO:0004674|GO:0005524|GO:0006468
Chy12g01587 1067 MobiDBLite consensus disorder prediction 344 368 - -
Chy12g01587 1067 SUPERFAMILY Protein kinase-like (PK-like) 654 985 IPR011009 -
Chy12g01587 1067 MobiDBLite consensus disorder prediction 497 519 - -
Chy12g01587 1067 MobiDBLite consensus disorder prediction 236 252 - -
Chy12g01587 1067 SMART serkin_6 657 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g01587 1067 Coils Coil 411 431 - -
Chy12g01587 1067 ProSitePatterns Serine/Threonine protein kinases active-site signature. 776 788 IPR008271 GO:0004672|GO:0006468
Chy12g01587 1067 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 1065 - -
Chy12g01587 1067 Gene3D Phosphorylase Kinase; domain 1 655 975 - -
Chy12g01587 1067 MobiDBLite consensus disorder prediction 213 313 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g00965 Chy-Chr9:12338370 Chy12g01587 Chy-Chr12:19391094 0 dispersed
Chy12g01587 Chy-Chr12:19391094 Chy01g00553 Chy-Chr1:3963768 2.07E-60 dispersed
Chy12g01587 Chy-Chr12:19391094 Chy07g00261 Chy-Chr7:2059432 1.73E-78 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71657 PF00069 Pkinase 6.00E-66 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g01587 - - csv:101214945 2104.72