Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy12g01587 | ATGACTAACATTACAGGATGCTATGGATCATCATGGGGATTTTCTGAAGGATTAAGAAATTTAGATTTCTGTACGCCAGAGCCCTCTTATGATTGTGAAAATCCAAAGGAGTCTGAATCTCCTCGCTTTCAAGCTATACTCCGAGTCACAAGTGCTCCTCGAAGAAAGTATCCTGCTGACATCAAAAGTTTTTCCCACGAACTAAATTCGAAAGGCGTACGACCTTTCCCACTTTGGAAGTCACGTCGTTTAAATAATTTGGAGGAGATCTTAGTTATGATACGAGCAAAATTTGACAAGGCCAAGGAAGAAGTAAATTCTGACTTGGCTATTTTTGCTGCTGATCTGGTTGGAGTTCTTGAGAAAAATGTTGATACTCATCCAGAGTGGCAAGAGACAATTGAAGACTTGTTGGTTTCAGCTCGAAGCTGTGCAATGTCATCCCCTGGTGAATTTTGGCTTCAGTGTGAAAGCATTGTTCAGGAATTGGATGATAGACGCCAAGAACTTCCTCCTGGCATGCTGAAACAACTTCATACTCGAATACTGTTCATTCTCACTAGATGTACCAGGTTGCTGCAGTTCCATAAAGAAAGTGGGTTAGCTGAAGATGAAAATGTTTTTCAACTTCGTCAGTCAAGAAATCTGCATTCTGCTGATAAACGCACGGCTCCGGCTATGGGAAGGGAAATGAAAAGTTCTAGCGCAGCCAAGGCTTCGAAGGGAACATCTTCCAGGAAATCTTACAGCCAGGAGCAGCGTGGTTTGGATTGGAGCAGAGAACATGATATACTGCCTGGGAATAATGTTTCAACATCTCCTGATGATACTTCAAAGAACTTGGTATCTCCTACTGGCAGAGATCGGATGGCATCTTGGAAAAGATTGCCTTCTCCAGCAAAAAGCAGCGTGAAAGAATCTACTTTGAAGGTTCAGGGTGATAATAAAAAATTTAAATCTCTGAACATGTCAAAAATCAGGATGAGTGTTTCTGAAACTGATTTTGCTGCTGCTAAGGTTTCTGAGCTTCCTCTGCCCAGAGATTCGCATGACCAACCTACAAAGCACCAACATAAACCTTCTTGGGGTTGGGGTGATCAACCAACTGTATCTGATGAGAGTTCAATAATTTGTCGAATTTGTGAAGAAGAAATTCCTACTGCAAATGTGGAAGATCATTCAAGAATTTGTGCAGTTGCTGATAGATGTGATCAAAAGGGTATAAGTGTTAATGAACGTCTACTCAGAATTGCTGAAACTTTAGAGAAGATGATCGAGTCTTTTACACAGAAGGATTCTCAGCATGTAGGAAGTCCGGATGTTGCAAAAGTTTCAAATTCTAGCATGACCGAAGAATCTGATATTTCCCCAAAACATAGTGATTGGTCCCGCAGGGGCTCAGAAGACATGCTAGATTGCTTCCATGAAACTGATAGTTCTGTATTTATGGATGACTTAAAAGGTTTACCTTCCATGTCTTGTAAAACTCGTTTTGGTCCAAAGTCTGATCAAGGTATGACAACATCATCGGCTGGTAGCATGACTCCTAGATCTCCTTTATTAACACCAAGAACCAGTCAGTTTGACTTGTTTTTGGCAGGAAAAGGTGCTTACTATGAACATGACGATCTTACGCAGATCAGTGATTTGGCAGATATTGCACGTTGTTCAGCTAATACACCTCTGGGGGATGATTGCTCGATGCAGTATCTGCTAACATGCCTTGAAGACTTGAGAGTTGTCATTAACCGCAGGAAGTTTAATGCACTGACAGTTGACACTTTTGGCACTCGCATTGAAAAGTTAATCCGGGAGAAATATTTGCAACTTTGTGAGCTGGTGGATGATGAAAAGATCGACATAGCAAGCACTGTCATTGATGAAGATACTCCTCTTGAAGATGACATTGTTCGTAGCTTAAGAACTAGTCCCATCCATTCTTCAAAGGATCGTACATCAATTGATGACTTTGAGATTATAAAACCAATCAGCCGTGGGGCATTTGGTCGGGTTTTCTTGGCTAAAAAGAGGACTACGGGGGATCTTTTTGCAATAAAGGTTTTGAAGAAAGCGGATATGATTCGGAAGAACGCCGTCGAAAGTATTTTGGCAGAACGTAATATTTTAATTTCTGTGCGCAATCCTTTTGTGGTTCGCTTCTTCTACTCTTTTACTTGTCGTGACAATTTGTATCTTGTGATGGAGTATTTGAATGGAGGAGACCTTTACTCTTTGTTGAGAAATTTGGGCTGCTTAGATGAAGAGGTTGCTCGTGTATATATCGCAGAAGTTGTTCTTGCATTGGAGTATTTGCATTCACTTGGGGTTGTTCATCGGGACTTAAAGCCTGATAATTTATTAATAGCACATGATGGCCATATTAAGCTGACAGATTTTGGGCTTTCCAAGGTTGGTCTAATCAACAGTACTGATGACTTGTCTGGACCAGCTGTTAGTGGGACCACTCTTCTTGGCTATGATGAGCCTACCATGTCTGCTTCTGAGCATCAACAAGAAAGACGGAAAAAACGTTCTGCTGTTGGCACACCAGACTATTTGGCACCAGAGATACTATTAGGAACTGGACACGGCGCCACAGCTGACTGGTGGTCTGTTGGGATCATTTTATTTGAACTTATTGTTGGCATTCCACCCTTCAATGCAGAGCATCCCCAGACTATATTTGATAACATTCTCAATCGTAAGATCCCTTGGCCTCAAATACCTGAAGAGATGAGCCATGATGCTCAAGATTTAATTGACCGATTATTGACGGAAGATCCCCACCAGCGACTTGGAGCTATAGGTGCATCAGAGGTGAAACAACATATGTTCTTCAAAGATATAAACTGGGACACGCTTGCCCGACAAAAGGCTGCATTTGTTCCAACATCTGAAAGTGCTCTCGATACTAGTTATTTTACAAGTCGCTATTCATGGAATCATTCAGATGATCATGTCTATCCACACAGTGAACTTGAGGATTCGAGTGATGCCGATAGCTTGAGTGGTGATAGTTGTTTGAGCAATCGTCAAGATGAAGTGGGAGATGAATGTGGGGGTCTTACAGATTTTGAGCCTGGTGCTTCTGTCAATTACTCATTCAGTAATTTCTCTTTCAAGAATCTCTCCCAGCTCGCATCCATCAACTATGACCTGCTTTCCAAGGGTTTGAAGGATGATCCTCCCAATCATGATGCATAA | 3204 | 41.67 | MTNITGCYGSSWGFSEGLRNLDFCTPEPSYDCENPKESESPRFQAILRVTSAPRRKYPADIKSFSHELNSKGVRPFPLWKSRRLNNLEEILVMIRAKFDKAKEEVNSDLAIFAADLVGVLEKNVDTHPEWQETIEDLLVSARSCAMSSPGEFWLQCESIVQELDDRRQELPPGMLKQLHTRILFILTRCTRLLQFHKESGLAEDENVFQLRQSRNLHSADKRTAPAMGREMKSSSAAKASKGTSSRKSYSQEQRGLDWSREHDILPGNNVSTSPDDTSKNLVSPTGRDRMASWKRLPSPAKSSVKESTLKVQGDNKKFKSLNMSKIRMSVSETDFAAAKVSELPLPRDSHDQPTKHQHKPSWGWGDQPTVSDESSIICRICEEEIPTANVEDHSRICAVADRCDQKGISVNERLLRIAETLEKMIESFTQKDSQHVGSPDVAKVSNSSMTEESDISPKHSDWSRRGSEDMLDCFHETDSSVFMDDLKGLPSMSCKTRFGPKSDQGMTTSSAGSMTPRSPLLTPRTSQFDLFLAGKGAYYEHDDLTQISDLADIARCSANTPLGDDCSMQYLLTCLEDLRVVINRRKFNALTVDTFGTRIEKLIREKYLQLCELVDDEKIDIASTVIDEDTPLEDDIVRSLRTSPIHSSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRDNLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLGVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGYDEPTMSASEHQQERRKKRSAVGTPDYLAPEILLGTGHGATADWWSVGIILFELIVGIPPFNAEHPQTIFDNILNRKIPWPQIPEEMSHDAQDLIDRLLTEDPHQRLGAIGASEVKQHMFFKDINWDTLARQKAAFVPTSESALDTSYFTSRYSWNHSDDHVYPHSELEDSSDADSLSGDSCLSNRQDEVGDECGGLTDFEPGASVNYSFSNFSFKNLSQLASINYDLLSKGLKDDPPNHDA* | 1068 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 19391094 | 19418918 | - | Chy12G221870.1 | Chy12g01587 | 239368 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy12g01587 | 1067 | PANTHER | SERINE/THREONINE PROTEIN KINASE IREH1-RELATED | 6 | 1065 | - | - | |
Chy12g01587 | 1067 | MobiDBLite | consensus disorder prediction | 265 | 285 | - | - | |
Chy12g01587 | 1067 | MobiDBLite | consensus disorder prediction | 429 | 463 | - | - | |
Chy12g01587 | 1067 | Gene3D | Transferase(Phosphotransferase) domain 1 | 741 | 964 | - | - | |
Chy12g01587 | 1067 | MobiDBLite | consensus disorder prediction | 430 | 453 | - | - | |
Chy12g01587 | 1067 | ProSiteProfiles | Protein kinase domain profile. | 657 | 946 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy12g01587 | 1067 | Coils | Coil | 84 | 104 | - | - | |
Chy12g01587 | 1067 | Pfam | Protein kinase domain | 657 | 946 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy12g01587 | 1067 | CDD | STKc_MAST_like | 663 | 951 | - | - | |
Chy12g01587 | 1067 | MobiDBLite | consensus disorder prediction | 989 | 1010 | - | - | |
Chy12g01587 | 1067 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 947 | 1050 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Chy12g01587 | 1067 | MobiDBLite | consensus disorder prediction | 344 | 368 | - | - | |
Chy12g01587 | 1067 | SUPERFAMILY | Protein kinase-like (PK-like) | 654 | 985 | IPR011009 | - | |
Chy12g01587 | 1067 | MobiDBLite | consensus disorder prediction | 497 | 519 | - | - | |
Chy12g01587 | 1067 | MobiDBLite | consensus disorder prediction | 236 | 252 | - | - | |
Chy12g01587 | 1067 | SMART | serkin_6 | 657 | 946 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy12g01587 | 1067 | Coils | Coil | 411 | 431 | - | - | |
Chy12g01587 | 1067 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 776 | 788 | IPR008271 | GO:0004672|GO:0006468 | |
Chy12g01587 | 1067 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 6 | 1065 | - | - | |
Chy12g01587 | 1067 | Gene3D | Phosphorylase Kinase; domain 1 | 655 | 975 | - | - | |
Chy12g01587 | 1067 | MobiDBLite | consensus disorder prediction | 213 | 313 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy09g00965 | Chy-Chr9:12338370 | Chy12g01587 | Chy-Chr12:19391094 | 0 | dispersed | |
Chy12g01587 | Chy-Chr12:19391094 | Chy01g00553 | Chy-Chr1:3963768 | 2.07E-60 | dispersed | |
Chy12g01587 | Chy-Chr12:19391094 | Chy07g00261 | Chy-Chr7:2059432 | 1.73E-78 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71657 | PF00069 | Pkinase | 6.00E-66 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy12g01587 | - | - | csv:101214945 | 2104.72 |