Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla01g00023 | ATGGCTTCGGATCCGAAGGTTCATCTATTTGAAGAAGTGGCAAAGCACAACAAAACCAAAGATTGCTGGCTTGTAATCTCTGGGAAGGTTTATGATGTAACTCCTTTCATGGAGGATCACCCCGGAGGTGATGAAGTATTATTGTCAGCAACTGGAAAAGATGCTACGAACGATTTCGAAGATGTTGGGCACAGCGATTCAGCAAGAGAAATGATGGACAAATATTACATTGGAGAAATTGATCCTTCAACAGTTCCTTTGAAGAAGATTTACATTCCATCACAACAAACGCAGTATAACCCAGATAAGACACCCGAGTTTGTGATTAAGATCTTGCAGTTTTTGGTTCCCATATTGATTTTGGGTTTGGCGTTTGCTGTTCGACACTACACCAAGAATGAATAA | 405 | 40.49 | MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYNPDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE | 134 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 156146 | 158349 | - | ClCG01G000210.1 | Cla01g00023 | 263612 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla01g00023 | 134 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 36 | 43 | IPR018506 | GO:0020037 | |
Cla01g00023 | 134 | PANTHER | CYTOCHROME B5 | 1 | 132 | - | - | |
Cla01g00023 | 134 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 4 | 87 | IPR036400 | - | |
Cla01g00023 | 134 | SMART | Cyt_b5_2 | 8 | 81 | IPR001199 | - | |
Cla01g00023 | 134 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 11 | 80 | IPR001199 | - | |
Cla01g00023 | 134 | Gene3D | - | 1 | 86 | IPR036400 | - | |
Cla01g00023 | 134 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 5 | 81 | IPR001199 | - | |
Cla01g00023 | 134 | PRINTS | Cytochrome B5 signature | 30 | 40 | IPR001199 | - | |
Cla01g00023 | 134 | PRINTS | Cytochrome B5 signature | 40 | 54 | IPR001199 | - | |
Cla01g00023 | 134 | PRINTS | Cytochrome B5 signature | 55 | 62 | IPR001199 | - | |
Cla01g00023 | 134 | PRINTS | Cytochrome B5 signature | 68 | 80 | IPR001199 | - | |
Cla01g00023 | 134 | PANTHER | CYTOCHROME B5-LIKE | 1 | 132 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g00023 | Cla-Chr1:156146 | Cla05g00353 | Cla-Chr5:3195017 | 1.78E-67 | dispersed | |
Cla06g00312 | Cla-Chr6:4015887 | Cla01g00023 | Cla-Chr1:156146 | 2.53E-11 | transposed | |
Cla01g00023 | Cla-Chr1:156146 | Cla05g00061 | Cla-Chr5:677537 | 9.40E-48 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla01g00023 | K23490 | - | csv:101207109 | 273.092 |