Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g00073 ATGAAGTGGATTCTTTTCATAATCGTTTCTCTCTTCATTTCCTTTCTTGTGAAGTTATTTCTTTCCCCTTCTAAGAATAAAGGCCCTTACAAGCTCCCACCAGGTCCATCCACATTCCCTATTCTCACTAACTTCCTATGGCTCCGCCAGTCCCCTCTTGAGCTTGAATCTTTGTTGCGTAGTTTCATTGCCAAATACGGGCCAATCCTCACTGTCCACGTCGGCCCGTCCCCGGCCATCATCATCGCTGACCGCTCCATCGCCCATAAGGCCCTCGTCCAAAACGGCGCCATTTTCGCCGACCGCCCTCAAGCTCTCTCCGTCAATAGGATCACGGCTTCTGCCAACCTCGACAATATCACCTCTGCTCCGTACGGCCCCACTTGGCGCCTTCTCCGCCGCAACCTTGCAGCGGAGATGCTCCACCCTTCACGGGTCAGGGCTTATTCCCGGGCTCGCAAGTGGGTTCTTGACATCCTCATCGCTCGCCTTTCGGCTGGGTCGGGATCCGAGGGTGGCGGGTCAGTTGTTGTTGAGCATCTTCAGTTTGCTATGTTTTGTTTGTTGGTTTTGATGTGTTTTGGGGACAAGTTGAATGAGACACAAATCTTGGAAATTCAACAAGTGCAGCGTGAGATGCTTGTAAATCTTCAACGCTTTGTTATACTTAATTTGTGGCCTAAGTTGATGAAGATTTTGCTTAGAAAGCGCTGGAAGGAATATTTACAACTCAAGAGCAAACAACAAAAGGTCAACTCTCCTTTTACTTCAATTCAAAATCTTTTCAAAAAAGTCCTAATCCCATTTATCGAGGCACGTGAGAAGGTCAAAGAGGAAAGGGAAAAAACGAAAGGAGAAGAAAAGGAAGAAATTGTGGTATCGTATGTTGATACGCTCCTCGATTTGCAACTCATCGATGAGAAAAGAAAGCTTAAAAACGAAGAAATGGTGAATTTATGTTCGGAGTTTCTCAACGCTGGGACCGACACCACAGCCACGACATTGCAATGGATCATGGCAAACTTGGTGAAGTACCCACAAATTCAACAAAAACTATTCGAAGAGATCAAAGGAGTTAAGGGATCACGGGAGGAGGAGGTGAAGGAAGAAGATTTAGGGAAGCTTCCATATTTGAAAGCTGTGATTCTAGAAGGATTAAGAAGACACCCACCAGGTCATTTCATGTTACCACATGCAGTGAAAGAAGATACAACGTTGGAGAATTATTTCATACCCAAGAACGGAATTGTGAATATCTACGCTGTGGAGATGGGGTGGGATCCACAGGTATGGGAGGATCCAATGGCGTTTAAGCCGGAGCGGTTCATGAATGACGACGGAGGAGAGGTGGCGTCGACGAAGTTCGATATAACGGGGAGCAAGGAGATTAAGATGATGCCATTTGGAGTAGGGAGGAGGATTTGTCCAGGGGCTACTTTGGCAATGCTTCATTTGGAATATTTTGTGGCAAATTTGGTTTGGAAATTTGAGTGGAAGGCTGTGGAAGGAGAAGAAGTTGATTTATCAGAGAAGATGGAATTCACCATTGTAATGAAGAAGCCTCTCAAAGCTCAGATTCATCCAAGGTTTTAG 1593 45.83 MKWILFIIVSLFISFLVKLFLSPSKNKGPYKLPPGPSTFPILTNFLWLRQSPLELESLLRSFIAKYGPILTVHVGPSPAIIIADRSIAHKALVQNGAIFADRPQALSVNRITASANLDNITSAPYGPTWRLLRRNLAAEMLHPSRVRAYSRARKWVLDILIARLSAGSGSEGGGSVVVEHLQFAMFCLLVLMCFGDKLNETQILEIQQVQREMLVNLQRFVILNLWPKLMKILLRKRWKEYLQLKSKQQKVNSPFTSIQNLFKKVLIPFIEAREKVKEEREKTKGEEKEEIVVSYVDTLLDLQLIDEKRKLKNEEMVNLCSEFLNAGTDTTATTLQWIMANLVKYPQIQQKLFEEIKGVKGSREEEVKEEDLGKLPYLKAVILEGLRRHPPGHFMLPHAVKEDTTLENYFIPKNGIVNIYAVEMGWDPQVWEDPMAFKPERFMNDDGGEVASTKFDITGSKEIKMMPFGVGRRICPGATLAMLHLEYFVANLVWKFEWKAVEGEEVDLSEKMEFTIVMKKPLKAQIHPRF 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 606948 608887 + ClCG01G000720.2 Cla01g00073 263662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g00073 530 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00073 530 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00073 530 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00073 530 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00073 530 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00073 530 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00073 530 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00073 530 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00073 530 SUPERFAMILY Cytochrome P450 33 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00073 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Cla01g00073 530 Pfam Cytochrome P450 33 525 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00073 530 Gene3D Cytochrome P450 26 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00073 530 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00073 530 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00073 530 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00073 530 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00073 530 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 527 - -
Cla01g00073 530 PANTHER CYTOCHROME P450 5 527 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00073 Cla-Chr1:606948 Cla09g01650 Cla-Chr9:32967752 0 dispersed
Cla01g00073 Cla-Chr1:606948 Cla08g00822 Cla-Chr8:20641581 2.56E-112 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g00073 K24184 - csv:101218555 822.772