Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g00097 ATGAAGGCAGGGCAAGATTTGGGCCCATTTCTTAGGCGTTGGGTCGGCCCACGTCCTTCACTCTTCTTCCGGTTCGCGGTCAAAGCCTTCCCAAAACCCTCCAATAGATGTCATACCCAAATTCCTCAGTGGCTGATTAATTTACCAGTCATGGCGACTACACTTATCTCTGGCCTTTCTTCAAACCTAAAGCTTCCTTTTCTCTCTGCAATTTCATCTTCCCACTTCCGACCCGGAACCCAGAACGCTCCATTTTCTAACTCCCCCTTCAAAGTTCAGACCCTCTGGCTCAATCCCACAAGAAATTCCAATGTGTTATCCCATAATCGAACTGGGTTTCTGATTTCGAGGAAATTGGAATCTTTCACCGTCTTTGCTGGAGATTCTGAAGCTCAAAGTGATGGTAGAGGGGAGAGTACTATGCCTGAACGGTTCAGGTACTTGACTAAAGAAGCTCCTGATCCTCCTGTGAGATGGCCTTTCTTTGTGGCTCTGGCATTTATTCTCTATGCCTGGAGAGCAGTCTTGTTTGAACTTGCTAACTGGAGAAAGGCTGTCCTTAGCATCTTTGGTTTTGTGGGATACATATTGAAAGGTGCTTTGGCCCTCATCCTCTATGTTATTGGAGATCCTATCACTTCTATGATAAGAGGCATTGAGACTGCATTCTACACGATTCGATCTTTCTACTCGGGCATAGTTGCATATGCGCCCATTCCCGAACTGACCACGATAATCATACTAGCCTCAACCGTGCTTGCAATTTCAGAAGCCAGTGCCCCTGATTCCGTTAGTAGTCAACCGTATCTTCTAACGATATCAGGTCTTGCTGGCTATGCAGCGGTGCGAGGTTACATTTCCGAGCCTTTCTTCTGGACGATTCTGTTGTGTGTGTATGGTTTTTCCAGGTTCGTCAAAAAGAGAAATGATGTAACTTCAACATTGCCTGTTGCTGCTGTGTTTGCTGCCATTGGAGAGCCATGGGTAAGAATCTTGGCTATGGGTTCATTTCTGGCTTTGGCCATTTATCACCATTGGAAGAAGGTTTCACAAGGACAGAAAGAAGATGAAGTTGAAGATGAAAAAGCTGTGTATCAGAGGGATGTTCCACTGCCTCTTCTGGGTGTAGCTTTGGCTATTGGAATTCGTGCTGCTGCCAAATGGGCTGGATATAGGCACTTAACATGGATGATTACATATATTGTATACATGGGAAGTCATCCAAAAGACCAAGTTTCCACTCCATCTCATCATATGAGAATGCTACAAGAAACCATTGGCAGTACTTTCGCTCCACACTCTTTGCTCTATAGCTATAAGAGAAGTTTCAATGGCTTCGTCGTGAAGTTAACCGAAGTCGAAGTCCAAAAAGTTTCAGAAATGAAGGGTGTAATCTCAGTTTTTCCAAATCGAAAAGCACAACTCCACACAACAAGATCGTGGGATTTCATGGGATTATCTGAACAAGTTAGTCGAGTTCCATCTGTGGAAAGTGATATCATTGTGGGAGTAATCGACACCGGGATTTGGCCGGAATCCCCTAGTTTCCTTGACCGTGGATATGGCCCGCCGCCGCCAAAGTGGAAGGGTTCTTGTGAAGTCTCACCCCATTTCTCTTGTAACAATAAAATCATTGGAGCTCGATCATATCGTAGCAATGGTCAGTATCCAATAAACGATATCAAAGGTCCAAGGGATTCAGATGGTCATGGGACACACACCGCATCTACGGTGGCAGGCGGGTTAGTTGGGGAAGCGAGTATGCTCGGTCTTGGCTTCGGCACGGCAAGAGGAGGAGTCCCATCTGCACGTATCGCCTCCTACAAAGTATGTTGGTCTGATGATTGCTTTGATGCTGATATACTTGCGGCATTTGATGATGCTATTGCCGATGGGGTTGACATCATATCTTTGTCTGTTGGACCAACTAGTACGAGAGAATACTTTGATAACCCCTTTGGTATCGGAGCTTTCCATGCAATGAAAAAGGGAATCCTAACATCAATGTCTGCTGGCAACGAGGGTCCAAGACCTTTCACTATTAGAAACTTCTCACCTTGGTCTCTATCAGTGGCAGCCAGTACTACTGATAGGAAATTTGTTACTGGTGTTCAACTTGGAGATGGAAGAAAATTCAATGGTGTAACAATCAATACATTTGATTTAAATAGAACACAATATCCATTGGTGTATGCTGGAAATATACCAAATGTCGCCGGTGGCTTTAATGGATCCATTTCCAGATTTTGCTTGGAAAACACGGTGGACAGGGAATTGGTGAAGGGTAAAATTGCCCTTTGTGATGTTTTTGTACCACCAACAATTTTGGGTTCTGTAAAAGCTGCAGTTGGAATTGTAATGCAAGATAGATCTCCAAAAGATCGCACATCCTCTTTTCCCTTGCCTGCCTCCCATCTTGACACACAACAAGGACTTCTCATTTCTTCTTATCTCAATTTAACTAGCCTTCCAACAGCTACCATCTTAAAAAGCACTGAAGGCAAGTATGAAGCCGCTCCTTTTGTTGCATCTTTCTCTTCAAGAGGTCCAAATCCATTAACCCCTAACATTCTCAAGCCAGATTTGAGTGGTCCAGGAGTTGAAATTCTTGCAGCATGGAGTCCTATGGGTTCTCCTTCAGGAGCTATTGATGACAATAGGAAACTTTTGTTTAACATAATTTCAGGAACTTCAATGGCTTGCCCACATGCTACAGCAGTTGCTGCATATGTTAAATCATTTCACCCTTCTTGGTCTCCTGCTGCACTCAAATCGGCACTTATGACAACAGCATTTCCTATAAGAGCTGAGCTTAACCCAGATGCAGAATTTGCATATGGCTCTGGCCATATAAATCCACTAGGGGCAGTAAATCCTGGATTAATCTACAATGCTTCTGAAATTGACTATATAAGATTTCTATGTGGTGAAGGTTATAACACCACTTTGCTCCAACAAATCTCTGAAGATAATTCTACATGTTCTCCCACCAATTCTGACCAAGTTTTTGACCTAAACTACCCTTCATTTGCTCTTTCCACATCAATCTCAACCTCATTCACTCAAATTTACAAAAGAAGGGTCACAAATGTTGGGTCAACAAATTCTACTTATAAAGCCACAATTTTTGCTCCTTTAGGGCTTAATATTACGGTCAATCCTTCTATTCTTTCCTTCAAAGCCTTGGGAGAAGAGCTAAAATTTGAGCTTAAAATTGACGGAAAAATCAGTAGTAGCATTGCATCCGCTTCCTTGGTTTGGGATGATGGTGTACACAAAGTGAGGAGTCCTATAATCGTCTTTGATGCTATTATGTTGATTAATCAATAA 3330 43.09 MKAGQDLGPFLRRWVGPRPSLFFRFAVKAFPKPSNRCHTQIPQWLINLPVMATTLISGLSSNLKLPFLSAISSSHFRPGTQNAPFSNSPFKVQTLWLNPTRNSNVLSHNRTGFLISRKLESFTVFAGDSEAQSDGRGESTMPERFRYLTKEAPDPPVRWPFFVALAFILYAWRAVLFELANWRKAVLSIFGFVGYILKGALALILYVIGDPITSMIRGIETAFYTIRSFYSGIVAYAPIPELTTIIILASTVLAISEASAPDSVSSQPYLLTISGLAGYAAVRGYISEPFFWTILLCVYGFSRFVKKRNDVTSTLPVAAVFAAIGEPWVRILAMGSFLALAIYHHWKKVSQGQKEDEVEDEKAVYQRDVPLPLLGVALAIGIRAAAKWAGYRHLTWMITYIVYMGSHPKDQVSTPSHHMRMLQETIGSTFAPHSLLYSYKRSFNGFVVKLTEVEVQKVSEMKGVISVFPNRKAQLHTTRSWDFMGLSEQVSRVPSVESDIIVGVIDTGIWPESPSFLDRGYGPPPPKWKGSCEVSPHFSCNNKIIGARSYRSNGQYPINDIKGPRDSDGHGTHTASTVAGGLVGEASMLGLGFGTARGGVPSARIASYKVCWSDDCFDADILAAFDDAIADGVDIISLSVGPTSTREYFDNPFGIGAFHAMKKGILTSMSAGNEGPRPFTIRNFSPWSLSVAASTTDRKFVTGVQLGDGRKFNGVTINTFDLNRTQYPLVYAGNIPNVAGGFNGSISRFCLENTVDRELVKGKIALCDVFVPPTILGSVKAAVGIVMQDRSPKDRTSSFPLPASHLDTQQGLLISSYLNLTSLPTATILKSTEGKYEAAPFVASFSSRGPNPLTPNILKPDLSGPGVEILAAWSPMGSPSGAIDDNRKLLFNIISGTSMACPHATAVAAYVKSFHPSWSPAALKSALMTTAFPIRAELNPDAEFAYGSGHINPLGAVNPGLIYNASEIDYIRFLCGEGYNTTLLQQISEDNSTCSPTNSDQVFDLNYPSFALSTSISTSFTQIYKRRVTNVGSTNSTYKATIFAPLGLNITVNPSILSFKALGEELKFELKIDGKISSSIASASLVWDDGVHKVRSPIIVFDAIMLINQ 1109
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 875191 886234 + ClCG01G000980.2 Cla01g00097 263686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g00097 1109 Pfam Peptidase inhibitor I9 399 476 IPR010259 -
Cla01g00097 1109 SUPERFAMILY Subtilisin-like 475 961 IPR036852 GO:0004252|GO:0006508
Cla01g00097 1109 Gene3D - 974 1102 - -
Cla01g00097 1109 CDD Peptidases_S8_3 474 931 IPR034197 -
Cla01g00097 1109 ProSitePatterns Serine proteases, subtilase family, serine active site. 896 906 IPR023828 -
Cla01g00097 1109 PRINTS Subtilisin serine protease family (S8) signature 566 579 IPR015500 -
Cla01g00097 1109 PRINTS Subtilisin serine protease family (S8) signature 895 911 IPR015500 -
Cla01g00097 1109 PRINTS Subtilisin serine protease family (S8) signature 497 516 IPR015500 -
Cla01g00097 1109 CDD PA_subtilisin_like 704 828 - -
Cla01g00097 1109 ProSiteProfiles Serine proteases, subtilase domain profile. 480 957 - -
Cla01g00097 1109 PANTHER PUTATIVE-RELATED 387 1102 - -
Cla01g00097 1109 Gene3D Peptidase S8/S53 domain 499 970 IPR036852 GO:0004252|GO:0006508
Cla01g00097 1109 Pfam Subtilase family 498 949 IPR000209 GO:0006508|GO:0008236
Cla01g00097 1109 Gene3D - 697 835 - -
Cla01g00097 1109 Pfam Fibronectin type-III domain 1004 1100 IPR041469 -
Cla01g00097 1109 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 387 1102 IPR045051 -
Cla01g00097 1109 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 392 476 IPR037045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00097 Cla-Chr1:875191 Cla05g02221 Cla-Chr5:33880920 0 dispersed
Cla01g00097 Cla-Chr1:875191 Cla04g00975 Cla-Chr4:24875088 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g00097 - - csv:101213928 1124.38