Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g00186 ATGGCTTTCTTTCCACCCCATCTTCCTCCCATTCCCTTTTCTTCATTAACCCTCTTCCATTTCTTCCTAATCATGCCATTGCTCCCTCCCGCCGCCACGTCGTTGCCGGAAGTCTTCTCCCCCCCCCTCGCCGATAAGGGCCCTGTCATTCCGGTCACCAATCTCGTCAAGTTCCTTGAGCGTCTTCAAGTTGTGGCCCTCAACTCCTTCGGTAAATTGGATTTCGATCTTAAATACTACGTCGATTTGTCTCTGAAATTCGATTTGAATTCTACCCAAACCGCTTTCGATGCCCTTGAACGATCCTCCAATGGCTCTGTCTCCGTCGAGAATTTGAAGGCCTTCATTACTGACTATTTCGATAGTGCTGGAGCCGACTTGGTTTACTCTGAGCCGGTTGATTTTGTCCCTCAGCCTGTTGGTTTCTTGCCTAAAGTTGAGAATGTGGAGGTTAGAGCTTGGGCTTTGGATATTCATAATTTCTGGAAGAATCTTAGCCGTAGAGTCTCCGATGATCTCATTCATCGGCCGGATACCCACACTCTGCTGCCGTTGCCGGAGCCCGTTGTCGTTCCAGGAGCCAGATTCCGGGAAGTTTACTATTGGGATTCCTATTGGATTATCAGAGGTTTGCTAGCTAGTAAAATGTATGATACTGCAAAGGGAATTGTTATTAATCTCATTTCAATGATTGATGAGTTTGGCCATGTTCTGAATGGTGCCAGATCTTACTACACCAACAGAAGTCAGCCTCCCCTTTTGAGTTCAATGGTTTATGATATATACCTTAGGACAGGGGATTTAGAGTTTGTGAGCAATGCACTCCCAGCCTTAATTAAAGAGCATAAGTTTTGGAATTCAGGATTCCATTCCATTACTGTCCGGGATGCTCCTGGTGGAAATGGAAATCACTCTTTATCTAGATACTATGCAATGTGGAACGAGCCGAGGCCAGAATCGTCACTGCTGGATGTGAAACTTGCCTCAAAGTTTGTTAATAACTATGAGAAACAACATCTATACCGGGAAATTGCATCGGCAGCTGAATCCGGTTGGGATTTCAGTACAAGATGGATGAGGGATCCAACAGACTTATCAACATTGGCTACCACTTCAATCCTGCCAGTTGATCTTAATGTATTCATACTCAAGATGGAACTGGACATTTCCAATTTGGCAAGAGCTGTTGGAGATTACTGCACGGCAGAACAATTCTTTGAGGCTTCTCTAGTCAGAAAGAAGACAATCAACTCTATTTTCTGGAATTCAGAGAAGGGACAATGGCTTGATTACTGGCTTGATAATGGCTCATACAAGGGTGCTCATACATGGGATGCTCGAAACCAGAACCAAAACGTATATGCTTCGAACTTCATTCCGTTGTGGATCGAATCATTCTACTCCGATAAGAAACAAATGAAGAAAGTCTTGAAAAGTTTACGAAACTCAGGATTATTGTGCAATGCCGGGATTGCAACTTCAATGATTAATTCAGGAGAACAATGGGATTTCCCAAATGGTTGGGCGCCAATCCAACACATGATCGTCGAGGGACTGGCAAGGTCTGGATTGAAGGAAGCAAGGGCATTGGCCGAGGACATTGCTGCGAGATGGCTTCGAACCAACTATGTAGCTTACAAGCACACAGGATATATGCATGAGAAATATGATGTCCAAAAGTGTGGAGACTTTGGTGGTGGAGACTGGTTTTGGATGGTCAAATGGAGTTGTTTTGGCATTCCTCGAAGAGTTTGGATGGCCGGAAGATCAAAAGATAGACTGCTACTTAACTTATTAAACACAACAACAAGATTACCATTCTTCTCTTAG 1830 44.21 MAFFPPHLPPIPFSSLTLFHFFLIMPLLPPAATSLPEVFSPPLADKGPVIPVTNLVKFLERLQVVALNSFGKLDFDLKYYVDLSLKFDLNSTQTAFDALERSSNGSVSVENLKAFITDYFDSAGADLVYSEPVDFVPQPVGFLPKVENVEVRAWALDIHNFWKNLSRRVSDDLIHRPDTHTLLPLPEPVVVPGARFREVYYWDSYWIIRGLLASKMYDTAKGIVINLISMIDEFGHVLNGARSYYTNRSQPPLLSSMVYDIYLRTGDLEFVSNALPALIKEHKFWNSGFHSITVRDAPGGNGNHSLSRYYAMWNEPRPESSLLDVKLASKFVNNYEKQHLYREIASAAESGWDFSTRWMRDPTDLSTLATTSILPVDLNVFILKMELDISNLARAVGDYCTAEQFFEASLVRKKTINSIFWNSEKGQWLDYWLDNGSYKGAHTWDARNQNQNVYASNFIPLWIESFYSDKKQMKKVLKSLRNSGLLCNAGIATSMINSGEQWDFPNGWAPIQHMIVEGLARSGLKEARALAEDIAARWLRTNYVAYKHTGYMHEKYDVQKCGDFGGGDWFWMVKWSCFGIPRRVWMAGRSKDRLLLNLLNTTTRLPFFS 609
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1867801 1875086 - ClCG01G001880.2 Cla01g00186 263775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g00186 609 PRINTS Glycosyl hydrolase family 37 signature 373 390 IPR001661 GO:0004555|GO:0005991
Cla01g00186 609 PRINTS Glycosyl hydrolase family 37 signature 416 432 IPR001661 GO:0004555|GO:0005991
Cla01g00186 609 PRINTS Glycosyl hydrolase family 37 signature 341 358 IPR001661 GO:0004555|GO:0005991
Cla01g00186 609 PRINTS Glycosyl hydrolase family 37 signature 494 510 IPR001661 GO:0004555|GO:0005991
Cla01g00186 609 PRINTS Glycosyl hydrolase family 37 signature 234 252 IPR001661 GO:0004555|GO:0005991
Cla01g00186 609 PRINTS Glycosyl hydrolase family 37 signature 306 323 IPR001661 GO:0004555|GO:0005991
Cla01g00186 609 ProSitePatterns Trehalase signature 2. 501 510 IPR018232 GO:0004555|GO:0005991
Cla01g00186 609 PANTHER TREHALASE 43 571 - -
Cla01g00186 609 SUPERFAMILY Six-hairpin glycosidases 70 567 IPR008928 GO:0005975
Cla01g00186 609 Pfam Trehalase 73 569 IPR001661 GO:0004555|GO:0005991
Cla01g00186 609 Gene3D - 61 575 IPR012341 GO:0005975
Cla01g00186 609 PANTHER TREHALASE 43 571 IPR001661 GO:0004555|GO:0005991
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00185 Cla-Chr1:1862997 Cla01g00186 Cla-Chr1:1867801 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g00186 K01194 - csv:101208719 1051.58