Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla01g00254 | ATGGATGGTATGGTGGTGGCCGTGGTAGCTGCGGCGGTGGTGACGTACATGATTTGGTTTTTGAATATCAAACGGTCGTTGAGTGGTCCACGTATCTGGCCATTATTGGGCAGTCTTCCAGGTTTGATTGAGAATAGTCATCGTATGCATGATTGGATTGCAGAGAATTTGCGGTCAACGGGTGGCACGTACCAGACTTGTACGTGTGCCATTCCGTTTCTGACAAAAAAGCAAGGTTTGGTGACGGTCACATGCGACCCGAAGAACTTGGAGTATATTTTGAAGACACAATTCGAGAATTACCCAAAAGGGCCTAATTGGCAGGATGTGTTTCATGATTTGCTTGGTGATGGAATCTTCAATTCTGATGGTAATACATGGTTGTTCCAGCGTAAGACTGCTGCACTGGAATTTACTACTAGGACCCTTCGCCAAGCCATGGCTCGTTGGGTTAGTCGAGCTATTAAGTCTCGCTTTTGCCCAATTCTTGAGTCAGCTCAATGTCAGGCCAACTCAGTTGATCTCCAAGACCTTCTACTTCGACTCACATTCGATAATATTTGTGGGTTGACTTTTGGCAAGGATCCGCAGACTCTCGCTCCTGAATTGCCCCACAACAGCTTTGCTATGGCTTTTGATCGAGCCACGGAAGCCACACTGTGTCGCTTTATTTTGCCTAGCTTTATATGGAAGCTAAAGAGATGGCTTCGGCTCGGGATGGAGGTGACCTTAACCCAAAGCCTCCACCATACAAATCAATACCTAACCAATATCATCGAGACACGTAAGCTCGAGTTGTCCAATCACCACCAGGTCAACAGTAGCCAAACCCCTCACGACGACTTGCTATCCAGATTCATGAAAAAGAAGGAATCCTATTCAGACACATTCCTCCAACACGTGGCACTCAACTTCATCCTAGCTGGCCGAGACACATCATCCGTCGCCCTCAGCTGGTTCTTCTGGCTAGTCATCAAAAACCCAAGAGTAGAGGAAAAAATCCTCACAGAAATCTGCACCGTCCTGTTGGAGACACGTGGCAAAGAGATATCCACGTGGACGGAAGAGCCATTGGAATTTGAAGAAGTGGATCGATTAATTTATCTCAAAGCCGCCATATCCGAAACTCTCCGACTCTACCCATCGGTGCCGGAAGATTCAAAACACGTAATAAACGACGACGTTTTACCCACCGGAACTTTCGTCCCCGCCAGCTCCTCCGTTACATATTCAATATATTCCATTGGTCGAATGAAATTCATTTGGGGAGAAGATTGTTTAGAATTCAAACCAGAGAGATGGTTGGTTACAAATGAAAACAAAATTGAGCTTCAAAATGCTTATAAATTTGTAGCCTTTAATGCCGGCCCAAGAATTTGTTTAGGAAAAGAATTGGCTTATCTACAAATAAAGTCGATTGCGGCCGCGGTCTTGCTCCGCCATCGCCTGACTTTAGTCGCCGGCCACCGTGTTGAGCAAAAGATGTCCTTGACGTTGTTCATGAAGTATGGTCTCAAAGTTCACTTGCATCCCAGAGATTTGGGGCTAGTGGTGGAGAAAATTAGCAAGAACACGGCGGAGACGGCGGCTGTGGCGGCGGATTGA | 1605 | 46.48 | MDGMVVAVVAAAVVTYMIWFLNIKRSLSGPRIWPLLGSLPGLIENSHRMHDWIAENLRSTGGTYQTCTCAIPFLTKKQGLVTVTCDPKNLEYILKTQFENYPKGPNWQDVFHDLLGDGIFNSDGNTWLFQRKTAALEFTTRTLRQAMARWVSRAIKSRFCPILESAQCQANSVDLQDLLLRLTFDNICGLTFGKDPQTLAPELPHNSFAMAFDRATEATLCRFILPSFIWKLKRWLRLGMEVTLTQSLHHTNQYLTNIIETRKLELSNHHQVNSSQTPHDDLLSRFMKKKESYSDTFLQHVALNFILAGRDTSSVALSWFFWLVIKNPRVEEKILTEICTVLLETRGKEISTWTEEPLEFEEVDRLIYLKAAISETLRLYPSVPEDSKHVINDDVLPTGTFVPASSSVTYSIYSIGRMKFIWGEDCLEFKPERWLVTNENKIELQNAYKFVAFNAGPRICLGKELAYLQIKSIAAAVLLRHRLTLVAGHRVEQKMSLTLFMKYGLKVHLHPRDLGLVVEKISKNTAETAAVAAD | 534 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 2583198 | 2584802 | + | ClCG01G002600.1 | Cla01g00254 | 263843 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla01g00254 | 534 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g00254 | 534 | PRINTS | P450 superfamily signature | 371 | 382 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g00254 | 534 | PRINTS | P450 superfamily signature | 451 | 460 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g00254 | 534 | PRINTS | P450 superfamily signature | 460 | 471 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g00254 | 534 | PANTHER | CYTOCHROME P450 | 6 | 514 | - | - | |
Cla01g00254 | 534 | PANTHER | CYTOCHROME P450 86A7 | 6 | 514 | - | - | |
Cla01g00254 | 534 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 453 | 462 | IPR017972 | GO:0005506|GO:0016705 | |
Cla01g00254 | 534 | SUPERFAMILY | Cytochrome P450 | 20 | 512 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g00254 | 534 | Pfam | Cytochrome P450 | 29 | 498 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g00254 | 534 | Gene3D | Cytochrome P450 | 22 | 514 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g00254 | 534 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g00254 | 534 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g00254 | 534 | PRINTS | E-class P450 group I signature | 370 | 388 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g00254 | 534 | PRINTS | E-class P450 group I signature | 450 | 460 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla01g00254 | 534 | PRINTS | E-class P450 group I signature | 460 | 483 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g00254 | Cla-Chr1:2583198 | Cla09g00419 | Cla-Chr9:3995408 | 2.73E-160 | dispersed | |
Cla03g00084 | Cla-Chr3:890944 | Cla01g00254 | Cla-Chr1:2583198 | 0 | transposed | |
Cla01g00254 | Cla-Chr1:2583198 | Cla06g00341 | Cla-Chr6:4336709 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla01g00254 | K15398 | - | csv:101216733 | 955.666 |