Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g00269 ATGGGGAAAGGAAGACCAAGAGCTGTGGAAAAGGGGGTAATAGGGCAGAATTTGAGTGTATGTTCATCAACGTCATTGAATATACCATCTGGGCCTGTGTATCATCCAACTGAAGATGAATTTAGAGACCCATTGGAGTATATATATAAGATCAGACCCGAGGCTGAGCCGTACGGGATTTGTAGGATAGTGCCACCCAAGAACTGGAAACCTCCATTTGCATTGAGATTAGATTCTTTTACATTTCCCACAAAAACGCAGGCCATTCATCAATTGCAGGTTAGACCTGCTGCCTGTGATTCAGAGACTTTTGAGCTTGAATATAATAGGTTTTTGGACGATCATTTTGGCAAAAAGATGAAGAAGAAGGTGGTTTTTGAGGGAGAGGAGTTGGATTTGTGCAAGTTATTTAATGCAGTGAAGCGTTATGGTGGGTATGATAAAGTTGTCAAGGAGAAGAGGTGGGGTGAGGTTTTTAGGTTTGTTAGATCAACAAGGAAGATTTCAGAATGTGCTAAGCATGTGCTGTGTCAATTGTACCGAGAACATCTCTATGATTATGAGAACTATTATAATAAGTTGAATAAGGATGTTACGAAGAGTTCAAAAAGGAAAATGCAAGATGAGAAGCTTAGTGAATGCTTGGCCGGATTTTCAACCTCTAAAAGGAGGCGGCAGAACACTGATGATGGCAGAGTCAGCGTCTCAAAGTTAAAAGAAGAAGAGAATAATGATCAGATTTGTGAGCAATGTAAAAGTGGATTGCATGGTGAAGTGATGCTTCTATGCGATAGGTGTGACAAGGGGTGGCACATATATTGTCTCTCACCTCCCCTAAAGCAAGTCCCACCTGGGAACTGGTATTGTTTAGATTGCTTGAATTCAGAGAAGGACAGTTTTGGATTTGTGCCTGGCAAATGCTTCTCCCTGGAAGCATTTAAGCGTATGGATTATAGGGCCAAGAAGAAATGGTTTGGCTCAGCGTCTGCTTCTAGAATGCAAATTGAGAAGAAGTTTTGGGAAATTGTGGAAGGTTCATTTGGTGAGGTTGAAGTTAAATATGGCAGTGACTTGGACACTTCGGTTTATGGCAGTGGCTTTCCTCGTGAAAATTTTCAGAGACCAGAATCAATTGATGCTAAGGAGTGGGATGAATATTGCAATAGTCCGTGGAATCTCAATAACTTGCCCAAATTGAAAGGGTCCATGCTTAGAGCCATTCGTCACAATATTACTGGTGTTATGGTGCCCTGGTTGTATATTGGGATGCTATTTTCATCATTCTGCTGGCATTTTGAAGATCACTGTTTCTATTCAATGAATTACCTACACTGGGGTGACCCAAAATGCTGGTATAGTGTACCTGGTAGTGAAGCTACGGCTTTTGAGAAGGTTATGCGGAACAACCTTCCTGATCTTTTTGATGCACAACCTGATTTGCTTTTTCAACTTGTCACCATGTTGAATCCATCCGTCTTGCAAGAAAATGGCGTACCCGTTTATACTGTACAACAGGAGCCTGGAAATTTTGTTGTGACCTTCCCTAGATCTTTCCATGGGGGTTTTAATCTTGGATTAAATTGTGCTGAGGCTGTAAATTTTGCTCCTGCTGACTGGATGCCTTATGGTGGGTTTGGAGAAGAACTGTATCAGCTTTATCACAAACCTGCTGTTTTTTCTCACGAGGAGCTTATCTGTGTGATAGCAAAGATGGACTGCAGTAACCGAGTTTCTCCTTACCTGAAGAAAGAGTTACTTAGGATTTATTCTAAGGAGAAAAGTTTGAGAGAACAACTTTGGAAAAATGGTGTAATCAGATCTTCTCCGTTGCCTCCTCGAAAGTGTCCTGAATATATCAGTACTGAGGAGGATCCAACGTGCGTTATATGCAAGAAGTACCTTTATCTTTCAGCTATAGGTTGCCGTTGCAGGAGATCTGCTTTTCACTGGCAACACCTTTGTGAATGCAAGTACAGCAGGCGGCGCCTTCTGTATCGTTATACACTTGCTGAACTATATGATTTGGTTGGTATAATTGATAGATGCGGTTCTGGGGATACAACTGAAAGTAAGGATTTGCGACAAGCTGGCTTATGCTACACTGAACGATGTACTTTGACAAAAAAGGTGAAAGGTGGTCGTGTCACTCTGTCTCAACTTGCAGAAAAATGGTTACTGCATTCAAGTAAGGTTCTTCAAGATCCATTCTCGAGTGAGGCATGTGTTAAGGCTTTGAGAGAAGCTGAGCAATTTCTTTGGGCTGGTCATGACATGGATAACGTCCGTGATGTTGTAAGAAACTTGGATGAGACTCAAAAGTGGGTTCAACGCATTGAAGATTCCCTTTCTAAAATTGAAGCGTGGTCATGTGATCATTCTGGAAGTTTAGAGAAAATTTGCTTGGATCATGTAAACAATTTGTTGAGTCTACCCCCAATATCATGTAACCATCCTGGGTATCTTAAGTTGAAGGATTATGTTGAAGAAGCAAAGATTTTAATACAAGATATTGACAATGCCTTATCAACATGCCCTGATGTTTCTGAATGGGAAATTTTGTACTCAAGAGTGTGTGCCTTTCCAATCCATATAGAAGAAAGTGAGAAGTTATTAGAAAACATATCAATAGCGAAGTCTTGCATAGAAAGTGTCAGAGAAATTTTGGAGAAACAGCCTGCTGCTTTTGAGCTTGAGATTCTCTACAAATTGAAGTCTAAGATCTTGGAGCTTGGAATCCAGCTTCCAGAGACAGAAATGGTGCTGGATTTAACAAGGCAAGCTGAACTACATCGTTCTAGATGTGCAGAAATTATGAATGGTCCCATGAACTTGAAGACTGTCGAACTTTTCCTTCAAGAATCTAACGGTTTTGCTGTTAATATACCTGAACTGAAGCTTATAAGACAGTATCATGATGATGTTGTTAAATGGAATGCTCGTCTTAATGCTGTTATGGTTAATGTTCATGAACGAGAGGATCAACATAATGTAATAGAAGAATTAAATTGCATTCTAAGAGATGGATTATCATTGAAAATAAAAGTTGATGATGTACCTATAATTGAGGTTGAGTTGAAGAAGGCTTCTGTCAGGGAAAAAGCTCAAAAGTTACGCAATACCAAGGTTACTATGGAATTCATGCAGAAACTGATGAAGGAGGCTGTAGAATTTGAAATTGATAAGGAAAAATTGTTTGCTGATATTCATGGAGTTCTCGATTCAGCAATGAGTTGGGAGAAGAGAGCTATGGATTTTCTAGCGCATGGGGCCCAGTTATATGATTTTGAAGAGATTATAAGGACTTCTGAAGATTTATGTGTCATTCTACCTTCTCTTCATAATGTCAAGAATGAAGTATCCTCGGCCAAGTCTTGGCTAAATATTTCAAAGCCTTTCTTAGAGTCTGTTCTCCCTACGTCATCTGCACCAAGATTCCAGCTGAAAATTGAAACACTAAAGGAGTTGGTTTCTCAGTCAAAACTCCACAAGGTCACTTTGCAAGAAAGCAGAGTGCTTGCTGAGGTTCTGAGAAAATGCGAGAATTGGAAAGATGGAGCAAACTTTTTATTGCAAGATATTGATAATCTTTTGAATGCGGATGATATAGGGGATGGGCTGAGCAATTGTCTTATTCCTAAGATCGAACAATTAGTTGATAGAATCGATACTATAATTACAGCAGGTATATCTCTAGGTTATGACTTCCGTGAGATTTCCAGACTCCAAAGTGCTTGTTCTACTCTCATGTGGTGCAATAAAGTTCTTTCTCTCTGCCATGGTATTCCTTCTTATCAGGATGTTGAGAGCTTGATGAGGGTTGAAGAGGACAATTCTTGTTTATATGCCTCTGGTGTTATGTGGAGCTTATTGGTGGAAGGTGTCAAATGGCTGAAACAAGCCTTAGAGAGTATCAGAATCAACTTCTCAGCCATGAATGGTCAACTTGTAAATGCTATTCAGAAGCACAAGTTGTGGCAGGAAGAAGTTCGCCAATTTTTCATTATGAAGCGTGCTGAACGATCGTGGACTCTGTTATTAAAGCTTAAGGAAGAAGGAGACATCGTTGCCTTCAATTGTTCAGAGCTACATTTAATTTTTTCCGAAGCTGAAAAGATTGAGAAGTGGAAGAAACAAATGGGGGAAATCATGAAAACATCTTTTGGGGATGGAAGTTCTCTTCTTGAATCTCTACGAGAGATAAAGAAATCAATGGATAGATCCCTATACATATATGAGAAGTCGTTGCTCTACACTGATCAGAACTTATGTGTGTGTTGCTCTTGCGATTCACAGGATCAGCATCTTTTTACTTGCTCAGGATGTTCAACACTTGTGGATTCCTTCTTGTCAGCTTTGCACTTGGCAAGGGGTTTTCGTTTTGACCCCTGGCTTTTTTCTTGGTTGCTTTTGTTAACGAGCATGACTCCTTCAACTACGTGTGAAGTGCTTACTACTGATACTGATAAACTTGTTGGAGTCGTGCTCTACCATTTGCAGTGCCTAGGGCAAGCAAGAGAAAAAACAAGCAATACAGATATCTTTACATGCCCTTATTGCTATAGCTCAAGGGGTGTATTATCAATTGATAAAAGTGGAGGTCCCTTGAGATGTTTAGCAAATCGTCCTGAACTAGAAATGCTCACTAAGCTCAAATCTGATGCTGTGAACTTCTGTGTCTGGATGGAAGAGGAAGATGTATTAAAGCAACTGATAGAGCAGGCTTTAGTATGCAAATCTCATTTGTCGGAAGTCTTGGACTTTGCATCACATTGTCATGATAAAGATTTTAGTATTGCTTGCAAGAGGTTAACTGTAGCGTTAAAGGCTATGGATGTTGCAGGCATTAACGATCATGAAGGTAAGTGCGGTCTTGAGATGGAACTGTTGAGGAACTCATGGAGATTCAGAGTCAAGGAAGCTCTTGAAGGTTCTGAAAAACCAACAATGCAACAAGTCCTGGAGCTTCTCGAAGAGGTATTTCCAGTTTCCATGGTTTACTGGAGCATTCTAAAACTTGTTGCAGTTGGTAAGTTTGTTAGATGTAACATGTGGCAGGGATCTGCGATAAGCATTCTGCCTGAAGATTGCTACAGACAGAAACTTTGGGAAGTGAAGACTGTTTGCTCAAAGTGGAAAAGTCTTGCAAGGAAGGTTTCAGCCGACTGTGGGGCTCTTGAATTGGAGAAAGTTTTTGAATTGATCCTGGAGGGTGAAAATTTACCTGCATACCTCGAGAGGGAGACCAAGTTATTAAGAAATCGAAGTATGCTTTATTGCATTTGCCGCAAGCCTAATGATCGCAGACCAATGCTTGCTTGTGATATTTGTGAAGAGTGGTATCACTTTGATTGTGTCAAGATAGAATCTACTCCCAAGATATACATTTGCCCTGCTTGCAAACCGCAAGTAGACAATAAAATGTTGATTCAGCTATCAACAGAATATCAAAGTTCAACTAGCGCAAAGTTTGTGGAGCCAAAGACCCCTTCTCCTCAACACACGAAACGGAGATCAAAACCGAAGAAAACAAAGCGAAATTTAGTTCGAAGTGTGACGGATTGTTACAGAGAATTCAGGTGCTCAAGTGGAATGGAACGCTTATGGTGGCAAAACAGGAAGCCTTTCAGGAGAGTAATCGTTGGAATCTATGAATTCTGTTGGGTTTGGAGTGCGAATGAGTTTGAATGTGCTATGTTAGTTGCAGCACCGATTCAGTACAAGATGAAGTACATGAAGCCATTGAACTTGTTTCGTGATTTGTTGAAGAGAAATGCTCGTGAGCGTGGCCGTTTGCTCGGTTTAGATGTTGGTGATAAGTATGTTGGTTTGGCCGTCTCTGACCCAGACAATAAAATCGCTTCCCCTCTTAGTGTTTTGATCAGGAAGAAGACTAATATGCATTTGGTGGCTGAGGATTTGCAGAGAATGATCTCTGAACTCTCCCTGGCTGGGTTCATTGTTGGGTACCCTTCCAATAGACTTTGGCGCCACCCGCATAGTGTGCAAGTGAAGATCTTCATCGATGACCTTTGCAAAACTGGAAAACTTGAAGGCGTAAAATATACTTTTTGGGATGAGTGCTTTACATCAAAGAATGTGGAACTACTGATAAAGCCATTGAAACTGCCCCCCACTTTGTCAAAAACAATAACGGACAAATTTGCTGCTGTTGGAATACTTCAGAAGAGCGGAATTGGAAAAGTGGTAGAGTCAAATGGACTATATGGGATCAGACATTTGATTCTCTCTTCTGAGGGGAGGATGGAACAATTTATTTTGAAGCTCTCAGTTGTAAAAAGGGCGATGGATATACTTTGA 6318 40.5 MGKGRPRAVEKGVIGQNLSVCSSTSLNIPSGPVYHPTEDEFRDPLEYIYKIRPEAEPYGICRIVPPKNWKPPFALRLDSFTFPTKTQAIHQLQVRPAACDSETFELEYNRFLDDHFGKKMKKKVVFEGEELDLCKLFNAVKRYGGYDKVVKEKRWGEVFRFVRSTRKISECAKHVLCQLYREHLYDYENYYNKLNKDVTKSSKRKMQDEKLSECLAGFSTSKRRRQNTDDGRVSVSKLKEEENNDQICEQCKSGLHGEVMLLCDRCDKGWHIYCLSPPLKQVPPGNWYCLDCLNSEKDSFGFVPGKCFSLEAFKRMDYRAKKKWFGSASASRMQIEKKFWEIVEGSFGEVEVKYGSDLDTSVYGSGFPRENFQRPESIDAKEWDEYCNSPWNLNNLPKLKGSMLRAIRHNITGVMVPWLYIGMLFSSFCWHFEDHCFYSMNYLHWGDPKCWYSVPGSEATAFEKVMRNNLPDLFDAQPDLLFQLVTMLNPSVLQENGVPVYTVQQEPGNFVVTFPRSFHGGFNLGLNCAEAVNFAPADWMPYGGFGEELYQLYHKPAVFSHEELICVIAKMDCSNRVSPYLKKELLRIYSKEKSLREQLWKNGVIRSSPLPPRKCPEYISTEEDPTCVICKKYLYLSAIGCRCRRSAFHWQHLCECKYSRRRLLYRYTLAELYDLVGIIDRCGSGDTTESKDLRQAGLCYTERCTLTKKVKGGRVTLSQLAEKWLLHSSKVLQDPFSSEACVKALREAEQFLWAGHDMDNVRDVVRNLDETQKWVQRIEDSLSKIEAWSCDHSGSLEKICLDHVNNLLSLPPISCNHPGYLKLKDYVEEAKILIQDIDNALSTCPDVSEWEILYSRVCAFPIHIEESEKLLENISIAKSCIESVREILEKQPAAFELEILYKLKSKILELGIQLPETEMVLDLTRQAELHRSRCAEIMNGPMNLKTVELFLQESNGFAVNIPELKLIRQYHDDVVKWNARLNAVMVNVHEREDQHNVIEELNCILRDGLSLKIKVDDVPIIEVELKKASVREKAQKLRNTKVTMEFMQKLMKEAVEFEIDKEKLFADIHGVLDSAMSWEKRAMDFLAHGAQLYDFEEIIRTSEDLCVILPSLHNVKNEVSSAKSWLNISKPFLESVLPTSSAPRFQLKIETLKELVSQSKLHKVTLQESRVLAEVLRKCENWKDGANFLLQDIDNLLNADDIGDGLSNCLIPKIEQLVDRIDTIITAGISLGYDFREISRLQSACSTLMWCNKVLSLCHGIPSYQDVESLMRVEEDNSCLYASGVMWSLLVEGVKWLKQALESIRINFSAMNGQLVNAIQKHKLWQEEVRQFFIMKRAERSWTLLLKLKEEGDIVAFNCSELHLIFSEAEKIEKWKKQMGEIMKTSFGDGSSLLESLREIKKSMDRSLYIYEKSLLYTDQNLCVCCSCDSQDQHLFTCSGCSTLVDSFLSALHLARGFRFDPWLFSWLLLLTSMTPSTTCEVLTTDTDKLVGVVLYHLQCLGQAREKTSNTDIFTCPYCYSSRGVLSIDKSGGPLRCLANRPELEMLTKLKSDAVNFCVWMEEEDVLKQLIEQALVCKSHLSEVLDFASHCHDKDFSIACKRLTVALKAMDVAGINDHEGKCGLEMELLRNSWRFRVKEALEGSEKPTMQQVLELLEEVFPVSMVYWSILKLVAVGKFVRCNMWQGSAISILPEDCYRQKLWEVKTVCSKWKSLARKVSADCGALELEKVFELILEGENLPAYLERETKLLRNRSMLYCICRKPNDRRPMLACDICEEWYHFDCVKIESTPKIYICPACKPQVDNKMLIQLSTEYQSSTSAKFVEPKTPSPQHTKRRSKPKKTKRNLVRSVTDCYREFRCSSGMERLWWQNRKPFRRVIVGIYEFCWVWSANEFECAMLVAAPIQYKMKYMKPLNLFRDLLKRNARERGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLIRKKTNMHLVAEDLQRMISELSLAGFIVGYPSNRLWRHPHSVQVKIFIDDLCKTGKLEGVKYTFWDECFTSKNVELLIKPLKLPPTLSKTITDKFAAVGILQKSGIGKVVESNGLYGIRHLILSSEGRMEQFILKLSVVKRAMDIL 2105
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2764571 2797551 + ClCG01G002770.2 Cla01g00269 263858

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g00269 2105 Gene3D - 1929 2064 IPR037027 GO:0006139
Cla01g00269 2105 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1750 1814 IPR013083 -
Cla01g00269 2105 SUPERFAMILY Clavaminate synthase-like 377 567 - -
Cla01g00269 2105 SUPERFAMILY ARID-like 81 199 IPR036431 GO:0003677
Cla01g00269 2105 ProSiteProfiles ARID domain profile. 98 192 IPR001606 GO:0003677
Cla01g00269 2105 Pfam C5HC2 zinc finger 627 674 IPR004198 -
Cla01g00269 2105 Pfam PHD-finger 1758 1801 IPR019787 -
Cla01g00269 2105 Pfam PHD-finger 247 294 IPR019787 -
Cla01g00269 2105 Pfam ARID/BRIGHT DNA binding domain 107 188 IPR001606 GO:0003677
Cla01g00269 2105 CDD YqgF 1931 2061 IPR005227 GO:0006364
Cla01g00269 2105 ProSitePatterns Zinc finger PHD-type signature. 1759 1799 IPR019786 -
Cla01g00269 2105 SMART JmjN_1 30 71 IPR003349 -
Cla01g00269 2105 SUPERFAMILY Ribonuclease H-like 1929 2062 IPR012337 -
Cla01g00269 2105 ProSiteProfiles JmjN domain profile. 31 72 IPR003349 -
Cla01g00269 2105 SMART rnase_8s 1929 2033 IPR006641 GO:0006139
Cla01g00269 2105 Pfam JmjC domain, hydroxylase 418 534 IPR003347 -
Cla01g00269 2105 SMART PHD_3 247 293 IPR001965 -
Cla01g00269 2105 SMART PHD_3 1758 1800 IPR001965 -
Cla01g00269 2105 Hamap Putative pre-16S rRNA nuclease [yqgF]. 1929 2068 IPR005227 GO:0006364
Cla01g00269 2105 Gene3D Cupin 32 536 - -
Cla01g00269 2105 ProSiteProfiles Zinc finger PHD-type profile. 245 295 IPR019787 -
Cla01g00269 2105 SUPERFAMILY FYVE/PHD zinc finger 235 296 IPR011011 -
Cla01g00269 2105 Pfam jmjN domain 32 65 IPR003349 -
Cla01g00269 2105 Pfam PLU-1-like protein 942 1187 IPR013637 -
Cla01g00269 2105 PANTHER LYSINE-SPECIFIC DEMETHYLASE 23 1034 - -
Cla01g00269 2105 Coils Coil 1047 1067 - -
Cla01g00269 2105 PANTHER LYSINE-SPECIFIC DEMETHYLASE LID 23 1034 - -
Cla01g00269 2105 SMART ARID_2 95 188 - -
Cla01g00269 2105 ProSiteProfiles JmjC domain profile. 385 551 IPR003347 -
Cla01g00269 2105 Pfam Holliday junction resolvase 1930 2062 IPR005227 GO:0006364
Cla01g00269 2105 Gene3D - 84 189 IPR036431 GO:0003677
Cla01g00269 2105 CDD PHD_RSF1 248 292 - -
Cla01g00269 2105 MobiDBLite consensus disorder prediction 1820 1844 - -
Cla01g00269 2105 SUPERFAMILY FYVE/PHD zinc finger 1751 1805 IPR011011 -
Cla01g00269 2105 ProSitePatterns Zinc finger PHD-type signature. 248 292 IPR019786 -
Cla01g00269 2105 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 249 294 IPR013083 -
Cla01g00269 2105 CDD ARID 100 188 - -
Cla01g00269 2105 SMART cupin_9 385 551 IPR003347 -
Cla01g00269 2105 SMART bright_3 99 193 IPR001606 GO:0003677
Cla01g00269 2105 Coils Coil 1020 1040 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g00269 K11446 KDM5, JARID1; [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67] - csv:101216734 3350.84
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00269 Cla-Chr1:2764571 Cla11g01036 Cla-Chr11:20677582 5.73E-15 dispersed
Cla09g00483 Cla-Chr9:4592770 Cla01g00269 Cla-Chr1:2764571 1.10E-08 dispersed
Cla11g01678 Cla-Chr11:30372427 Cla01g00269 Cla-Chr1:2764571 8.65E-06 dispersed
Cla01g00269 Cla-Chr1:2764571 Cla09g01096 Cla-Chr9:11773233 8.88E-09 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g328 . . . . . . . . . . Cma02g01458 . Car02g01224 . . . Cpe05g00329 . . . . . . . . . . . . . . Cone8ag0310 . . . . Csa05g00287 Chy09g01219 . . . . . . . . . . Cmo02g01493 . . . . . . . Bhi12g00248 . . . . . . Cla01g00269 Cam01g0278 Cec01g0270 Cco01g0285 Clacu01g0277 Cmu01g0265 Cre09g2244 Lsi09g00264 . . Cme09g01756
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010126 0 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 1 1 32
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
60346 PF08429 PLU-1 6.50E-24 No_clan Cla TR
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cla01g00269 Cla_Chr01 FPKM 17.02943 19.411077 52.85952 56.923641 2.056179 1.347363 1.864928 2.112408 1.687241 1.923109