Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g00329 ATGTGGAGAGCTAAAGAAGAGATGTTGGGAGTGATAGGAAAAGGGAATTCAATTGAGGAGTCACACATCGAGAAGCTCCCATATTTACAAGCAATCATCAAAGAAACCTTACGAATGCAATCTGCACTTCTTCTTCCTCGTAAAGCCGAAGCAGAAGTCACAATTTCAGGCTTCACAATTCCAAAGGGCACTCAAATAATTGTCAATATGTGGGCTTCAGGCAGAGACTCCAATGTATGGGAAAATCCAGATTTGTTCATGCCAGAAAGGTTTTTGGGTTGTGAAACCAAAGGTAGAAACTTTGAGTTCATTCCATTTGGTAGTGGGCGGAGAATTTGCCCTGGTCAGCCATTAGCAACGAGAATGTTGCATTTGATGGTGGGTTCTTTGGTTCATTGCTTTGATTGGAAGCTTGAAGATGGAGTCACACCAGAGAACTTGAATATGGATGAAAAATTTGGTATTACTGTCGAGAAAGCTCACCCTTTACGAGCTGTACCTCTTCTTACATGA 513 41.72 MWRAKEEMLGVIGKGNSIEESHIEKLPYLQAIIKETLRMQSALLLPRKAEAEVTISGFTIPKGTQIIVNMWASGRDSNVWENPDLFMPERFLGCETKGRNFEFIPFGSGRRICPGQPLATRMLHLMVGSLVHCFDWKLEDGVTPENLNMDEKFGITVEKAHPLRAVPLLT 170
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3563307 3563819 - ClCG01G003405.1 Cla01g00329 263918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g00329 170 Pfam Cytochrome P450 3 156 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00329 170 SUPERFAMILY Cytochrome P450 3 165 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00329 170 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 168 - -
Cla01g00329 170 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 106 115 IPR017972 GO:0005506|GO:0016705
Cla01g00329 170 Gene3D Cytochrome P450 1 166 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00329 170 PRINTS E-class P450 group I signature 30 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00329 170 PRINTS E-class P450 group I signature 103 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00329 170 PRINTS E-class P450 group I signature 113 136 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00329 170 PRINTS E-class P450 group I signature 69 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00329 170 PRINTS P450 superfamily signature 31 42 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00329 170 PRINTS P450 superfamily signature 104 113 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00329 170 PRINTS P450 superfamily signature 113 124 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00329 Cla-Chr1:3563307 Cla07g00138 Cla-Chr7:1573206 1.57E-69 dispersed
Cla01g00329 Cla-Chr1:3563307 Cla01g00330 Cla-Chr1:3568732 1.57E-63 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g00329 - - cmos:111459410 289.656