Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g00356 ATGGAACCCACTTCCAATTTCCTTCACAGTCTCATTCATTCTCTCAATTTCATAGATCCCAATAACCAAACCCGCTTTCTTCTCACCCTTTTCACCGCTTTTCTACTTCTTCTTTATGTTAAATATTGGCCGCGGCGCTTCCGGCTGCCTCCGGGTCCCCCCGGCGTTCCTCTGCTCGGAAATCTGCCGTTTCTAGACCCAGAACTTCACACTTACTTCACGGAATTGGGCAAAAAATACGGCCCAATTGTCAAGCTCCAACTGGGTGGAAAGATTGGTATAATCGTCAACTCACCCTCCGTGGCACGTGAGATATTGAAGGATCACGATGTCATCTTTGCCAATCGTGATGTTCCTCAGGCAGGCCGAATCGCCACGTATGGCGGTTTTGACATAAGTTGGACCCCATACGGACCTGAATGGCGGATGTTGAGAAAAATTTGTACAATCAAGATGCTTAGCAATGCAGGTTTGGATTCTGTTTATGAGCTCCGCCATAGAGAGGTTAAAAATACCGTGGCTTACTTGTACCGGCGAGCTGGGTCGGCGGTGAACGTGGGAGAGCAGGTGTTTTTGACAGTTTTCAACGTGGTTACGAGCATGTTGTGGGGTGGGTCAGTGGATGGGGACAAAATTAGGGATGGCCTCGCGGCTGAGTTTAGACAAACGATTTCGGACATAACAGGGCTTTTGGGTAAGCCTAATGTTTCGGACTTTTTTCCGAGCTTGGCCCGTTTCGATTTCCAAGGAATTGAAAAACAAATGCTTAAGCTTGTTCTGAAATTGGACACTATTTTTGAAAAGATGATTGATGAACGATTGAAAATGACCGACGTTGATGAGGGTGCGAAGAAAAATGATTTCTTACAGTTCTTACTTAAAGTCAAAGATGAAGGCGATTCCAAAACTCCACTTACCATGGTTCAACTTAAAGGCTTGCTCATGATTCCTTCTAACTCTTACCCGCTTTCTTCTCACCTTCTTCGTCGGGTTTCTACCAATTTTTCTTTATGTCAAACGTTGGCGGCGGCGCTTGCTCGTGGCGTTCCGGTGCTGGGGAATCTGCCGTTTCTAGACCCAGAACTTCACACTTACTTCACGGAATTGGGCCGAAAGTACGGTCCAATTGTAAAGCTCCAATTGGGTGGAAAGATTGGTATAATCTTAAATTCACCAACGGTAGCGCGTGAGGTATTGAAGGACCACGATATCACATTCGCCAATCGTGACGTTCCTCAAGCAGGCCGAGTCGCCACGTACGGCGGTTTTGACATAACTTGGACCCCATATGGACCCGAGTGGCGGATGTTGAGAAAAGTTTGTACAATCAAGATGCTTAGCAATGCCAGTTTGGATTCTGTTTATGAGCTCCGTCGTAGAGAGGTGAGAAACACCGTGGGTCACTTGTACCGACGGGCGGGGGCGGCGGTCAACGTGGGAGAGCAAGGTTTTTTGACGGTTTTCAACGTGATTACGAGCATGTTGTGGGGTGGGACAGTGGAGGGGGATCAAAAGGACGCCTTTGCGGCTGAGTTTAGGGGGCTGGTTTCGGACATGACTGAGTTAGCGGTTTTGCACGCTTTGATCTCCAAGGAATCGAGAAGCAAGTGCTTAAGCTTGTCCCGAAATTGGACACGATTGAGAATGATGGATGAAGAGGAGAGTAGGAATAAAAATGATTTCTTGCAGTTCTTACTTAAAGTCAAAGATGAAAGCGATTCCAAAACACCTCTCACCATGGTCCAACTTAAGGCCTTGCTAATGATTCCTTCTAACTCTTACCCGCTTTCTTCTCACCTTCTTCGTCGGGTTTCTACCAATTTTTCTTTATGTCAAACGTTGGCGGCGGCGCTTGCTCGTGGCGTTCCGGTGCTGGGGAATCTGCCGTTTCTAGACCCAGAACTTCACACTTACTTCACGGAATTGGGCCGAAAGTACGGTCCAATTGTAAAGCTCCAATTGGGTGGAAAGATTGGTATAATCTTAAATTCACCAACGGTAGCGCGTGAGGTATTGAAGGACCACGATATCACATTCGCCAATCGTGACGTTCCTCAAGCAGGCCGAGTCGCCACGTACGGCGGTTTTGACATAACTTGGACCCCATATGGACCCGAGTGGCGGATGTTGAGAAAAGTTTGTACAATCAAGATGCTTAGCAATGCCAGTTTGGATTCTGTTTATGAGCTCCGTCTTGACCAATCTCCTTTCCTCTTCACCTTCGTCGCCGCTCTTCTAATAATTTTCCTCTATGTAAAACTCACGCGCCAGCGCGTGCCTCTTCCACCTGGTCCCTGGGGCGTTCCACTACTCGGAAACCTCCCATTTCTTGACCCCGATCTTCACACGTACTTTGCCGAATTAGGCCGAAAATATGGCCCAATAGTAAAGCTCCAACTCGGCAATAGAATTGGTATAATCGTAAATTCACCTTCGGTAGCACGTGAAGTGTTGAAAGACCACGATGTTACATTTGCAAATCGCGATGTTCCTCAAGCCGGGAGAGCTGCCTCGTACGGCGGTTCTGACATAGTTTGGACACCGTACGGACCCGAGTGGCGAATGTTGAGAAAAGTTTGTGTGTTAAAGATGCTGAGCAACGCCACTTTGGATAGCGTTTACGAGCTCCGCCGTAGAGAGGTGAGAAACACGGTGGCTCACTTGTACCGGCGATGTGGGTCAGCAGTGAACGTGGGAGAGCAGGGGTTTTTGACGGTTTTCAACGTGGTTACAAGCATGTTGTGGGGTGGTTCAGTGGAAGGAGAGCAGAGGGATGGTCTTGCAGCGGAGTTTAGAGAGACAATTTCGGAAATAACAGAGCTATTGGGAAAGCCTAATATTTCGGACTTTTTTCCAAGCTTGGCCCGTTTTGATCTCCAAGGGATTGAGAAGAAGATGCGTGAGATTGCTCCGAGATTTGATAACATTTTCGAAAAGATGATAGATGAACGATTGAAAATTGGTGGTGGAGATGACGACGGGAGTGTCAAGAAAAATGATTTCTTGCAGTTCTTACTTGAAGTTAAAGATGAAGGAGAATCCAAGACTCCTCTCACCATCACCCACCTTAAAGCCTTGCTCATGTCTCAGTTCCCATCCTCTTCTCATTTTGATTTTTCCAACGAAGACAAACAAATTTCAACCGCTCTTCTTTTTATCTTCGTCTTCGTTGTTGCTCTGTTATGGCTCCGACCCGAATTCCGGCGTCCTTCTTCGCCTCCAGGCCCCCGTGGCCTGCCGCTGGTCGGATACCTTCCATTTTTATCCGGCAATCTCCACCAGACGTTCGCCGATTTGGCCCAAATCTACGGCCCAATTTTCAAGCTCCGCCTTGGAACCAAGCTCTGCGTCGTTCTCAGCTCCCCTTCCTCCATCAACGTAGCCCTCCGCCACCAAGAAACCGTCTTCGCCAACCGAGATTCCACTGTCAGCTCTCTTCTCGCCACCTACGGTGAAGCCGATATTGGGTTCAGTCAGGACGACGGCGATTGGAAGAAGCTGAGAAAAATCTTCGCCCGCAAAATGCTTAGCAAATCAAATCTAGATGAGTCCTATCCTCTGCGAAGACAAGAAGTGAGAAAAGTAATTAAAGGCGTGTTGGAATCGGCCGGAACCCCAATTGATATCGGCAAACTGGGTCTCTTCGCTGCTGCGAAATCGGTTATGGCAATGACGTGGGGCGGCTCCGGGGGGATGATCGGAGTGGATGGAGCGGAGTTGGAAGATAAGTTCAGGGAAGTGGTGGATGAAATGATGGTGTTGATTGCATCTCCGAATTTGTCGGATCTTTTTCCGGTGTTGGGTCGGGAATTGCGAGGGGTGATGAATGTTTGTGATGAGGTTCTAAATTCCGCCATTGAAGAACAGAGGAAGATGGGAGGAAATGGGGTTAGGGACGTCGGCGAGGATAGATCAGAGTCCATTACAGATACAACTCAAGGCCTTGCTAATGCATCATTGTTGCATGCTTTTGAGTGGAAATTGCTTGAGGGTTCAAAGCTTGATTTGGAAGAGAAGTTTGGAATTGTCACCAAGAAGTTGAACCCCTTGGTTGCTATACCAATGCCAAGGCTTTCCAATTTGGAGCTCTATAATATT 4098 47.83 MEPTSNFLHSLIHSLNFIDPNNQTRFLLTLFTAFLLLLYVKYWPRRFRLPPGPPGVPLLGNLPFLDPELHTYFTELGKKYGPIVKLQLGGKIGIIVNSPSVAREILKDHDVIFANRDVPQAGRIATYGGFDISWTPYGPEWRMLRKICTIKMLSNAGLDSVYELRHREVKNTVAYLYRRAGSAVNVGEQVFLTVFNVVTSMLWGGSVDGDKIRDGLAAEFRQTISDITGLLGKPNVSDFFPSLARFDFQGIEKQMLKLVLKLDTIFEKMIDERLKMTDVDEGAKKNDFLQFLLKVKDEGDSKTPLTMVQLKGLLMIPSNSYPLSSHLLRRVSTNFSLCQTLAAALARGVPVLGNLPFLDPELHTYFTELGRKYGPIVKLQLGGKIGIILNSPTVAREVLKDHDITFANRDVPQAGRVATYGGFDITWTPYGPEWRMLRKVCTIKMLSNASLDSVYELRRREVRNTVGHLYRRAGAAVNVGEQGFLTVFNVITSMLWGGTVEGDQKDAFAAEFRGLVSDMTELAVLHALISKESRSKCLSLSRNWTRLRMMDEEESRNKNDFLQFLLKVKDESDSKTPLTMVQLKALLMIPSNSYPLSSHLLRRVSTNFSLCQTLAAALARGVPVLGNLPFLDPELHTYFTELGRKYGPIVKLQLGGKIGIILNSPTVAREVLKDHDITFANRDVPQAGRVATYGGFDITWTPYGPEWRMLRKVCTIKMLSNASLDSVYELRLDQSPFLFTFVAALLIIFLYVKLTRQRVPLPPGPWGVPLLGNLPFLDPDLHTYFAELGRKYGPIVKLQLGNRIGIIVNSPSVAREVLKDHDVTFANRDVPQAGRAASYGGSDIVWTPYGPEWRMLRKVCVLKMLSNATLDSVYELRRREVRNTVAHLYRRCGSAVNVGEQGFLTVFNVVTSMLWGGSVEGEQRDGLAAEFRETISEITELLGKPNISDFFPSLARFDLQGIEKKMREIAPRFDNIFEKMIDERLKIGGGDDDGSVKKNDFLQFLLEVKDEGESKTPLTITHLKALLMSQFPSSSHFDFSNEDKQISTALLFIFVFVVALLWLRPEFRRPSSPPGPRGLPLVGYLPFLSGNLHQTFADLAQIYGPIFKLRLGTKLCVVLSSPSSINVALRHQETVFANRDSTVSSLLATYGEADIGFSQDDGDWKKLRKIFARKMLSKSNLDESYPLRRQEVRKVIKGVLESAGTPIDIGKLGLFAAAKSVMAMTWGGSGGMIGVDGAELEDKFREVVDEMMVLIASPNLSDLFPVLGRELRGVMNVCDEVLNSAIEEQRKMGGNGVRDVGEDRSESITDTTQGLANASLLHAFEWKLLEGSKLDLEEKFGIVTKKLNPLVAIPMPRLSNLELYNI 1366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3903239 3930170 - ClCG01G003710.1 Cla01g00356 263945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g00356 1366 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 619 732 - -
Cla01g00356 1366 SUPERFAMILY Cytochrome P450 620 740 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00356 1366 PANTHER OS08G0547900 PROTEIN 737 1029 - -
Cla01g00356 1366 PANTHER OS08G0547900 PROTEIN 1318 1365 - -
Cla01g00356 1366 PRINTS E-class P450 group I signature 813 834 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00356 1366 PRINTS E-class P450 group I signature 789 808 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00356 1366 PRINTS E-class P450 group I signature 905 923 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00356 1366 Gene3D Cytochrome P450 343 590 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00356 1366 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 346 523 - -
Cla01g00356 1366 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 737 1029 - -
Cla01g00356 1366 SUPERFAMILY Cytochrome P450 347 588 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00356 1366 SUPERFAMILY Cytochrome P450 760 1031 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00356 1366 PANTHER OS08G0547900 PROTEIN 346 523 - -
Cla01g00356 1366 PANTHER OS08G0547900 PROTEIN 546 588 - -
Cla01g00356 1366 PANTHER OS08G0547900 PROTEIN 619 732 - -
Cla01g00356 1366 PANTHER OS08G0547900 PROTEIN 18 315 - -
Cla01g00356 1366 PANTHER OS08G0547900 PROTEIN 1044 1300 - -
Cla01g00356 1366 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 546 588 - -
Cla01g00356 1366 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 18 315 - -
Cla01g00356 1366 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 1044 1300 - -
Cla01g00356 1366 SUPERFAMILY Cytochrome P450 1073 1295 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00356 1366 Pfam Cytochrome P450 762 1031 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00356 1366 Pfam Cytochrome P450 348 587 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00356 1366 Pfam Cytochrome P450 621 727 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00356 1366 Pfam Cytochrome P450 50 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00356 1366 Pfam Cytochrome P450 1073 1291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00356 1366 Gene3D Cytochrome P450 1068 1338 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00356 1366 Gene3D Cytochrome P450 617 741 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00356 1366 Gene3D Cytochrome P450 45 316 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00356 1366 Gene3D Cytochrome P450 754 1054 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00356 1366 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 1318 1365 - -
Cla01g00356 1366 SUPERFAMILY Cytochrome P450 42 315 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00356 Cla-Chr1:3903239 Cla01g01872 Cla-Chr1:33534605 1.88E-21 dispersed
Cla01g00356 Cla-Chr1:3903239 Cla01g00358 Cla-Chr1:3911888 1.43E-08 proximal
Cla01g00355 Cla-Chr1:3889482 Cla01g00356 Cla-Chr1:3903239 4.03E-13 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g00356 - - csv:101213303 517.309