Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g00435 ATGTTGGTTGAGATATTTGAAGCCATTGGGTTAGTGATATTTGGTTTATTTATTTTGTTTGTTTTTAGGGTATTGTTTTGTTGTTGGGTTTCACCATTTTTAGTGCATAAAAAGCTTAGGAGAAATGGGTTTAGGGGTCCAACCCCAAGTTTCCCTCTCGGAAATATTAGTGAGATGAAAAAGAAGAATGTAAATCCAACAATTCAACAATCTTCTCATCCTCAACTTACTCACAACATTCATTCCATCGTCTTTCCCTATTTCGCTCGGTGGCAAGCTACTTATGGAAAAGTATTTATATATTGGTTGGGGACAGAGCCATTCTTATACATTGGAGAGCCAGAAATTGTGAAGATATTGTCAAAAGAAGTAAAAGCAAAGTATTGGGGAAAGCCATCAGTATTCAGAAATGATAGGAAATCAATGTTTGGAAATGGTTTGGTAATGGCTGAAGGAGATGAGTGGGTTCGTCAAAGACATATCATCACTCCCGCATTTAATCCTTCCAACTTGAAGGCGATGGCAAGCTTAATGGTGGAGTCCGCCACCGAAATGGTGGAGAGATGGACCAACCTCGTCAACTCCGGCCACCCTCAAATCGAAGTTGAGCAAGAAATAACTTCCACCGCCGGCGAAATCATTGCCAAAACCAGCTTCGGAATCCACCATGAAAGCGGCCGCCAAGTCTTCAACAAACTCCGCCATCTCCAAATCACTCTCTTCAAAACCAACCGCCTGGTGGGAGTCCCCTTCGCCGGAGTTCTAAACGCGGGCAAGGCACGGCAGGCCAAACGCCTTGGGAAGGAGATCGATGCCTTATTCCTGTCGGTAATAAGAGAGAGGAGAGAGAATTCGGCGGCGGAGGAGCAGCAGAATGATCTTTTGAGTTTGCTTTTGAAAGAGAGTAGTGGGGGCGGCGGAGAAGGGAGGAGGCCGTTGAGTACGACGGAGCTGATTGATGAATGTAAAACGTTCTTCTTTGGTGGGCATGAAACGACGGCGTTGGCTCTGACGTGGACTTTGATGCTATTGGCTATTCATTCTGAGTGGCAGACAAAGTTGAGAGAGGAAATTAAGGAAGTGTTTGGTGATAATATAAAAACTCAGTTTGATTTCACCAACCTTGCTTCACTCAAAAAGATGGGATGGGTAATGAGTGAGGTTCTACGTCTATATCCATCAGCCCCAAACGTACAAAGACAAGCAAGAAAAGACATTACAATAAACGGACTCACAATTCCAAATGGCACCAACATGTGGATCGATGTTGTAGCCATGCACCACGACCAAGCCCTTTGGGGCCCCCAAGTCAATGAGTTTCACCCTGAGAGGTTCCAAAACGACGTCGTTTCGGGCGGCTGCACCCACAAGATGGGCTACTTGCCCTTTGGCTTCGGAGGAAGAATGTGTGTTGGTAGGCACTTGACGTTCATGGAGTATAAGATCGTATTGACTCTTATTTTGTCTAGGTTTTCCTTCTCTTTGTCGCCCGATTACCAACATTCGCCTTCCATAATGCTCTCGCTTCGACCTGCCCATGGTCTACCTCTCGTTTTTCGACTACTCGATGATTAA 1575 45.14 MLVEIFEAIGLVIFGLFILFVFRVLFCCWVSPFLVHKKLRRNGFRGPTPSFPLGNISEMKKKNVNPTIQQSSHPQLTHNIHSIVFPYFARWQATYGKVFIYWLGTEPFLYIGEPEIVKILSKEVKAKYWGKPSVFRNDRKSMFGNGLVMAEGDEWVRQRHIITPAFNPSNLKAMASLMVESATEMVERWTNLVNSGHPQIEVEQEITSTAGEIIAKTSFGIHHESGRQVFNKLRHLQITLFKTNRLVGVPFAGVLNAGKARQAKRLGKEIDALFLSVIRERRENSAAEEQQNDLLSLLLKESSGGGGEGRRPLSTTELIDECKTFFFGGHETTALALTWTLMLLAIHSEWQTKLREEIKEVFGDNIKTQFDFTNLASLKKMGWVMSEVLRLYPSAPNVQRQARKDITINGLTIPNGTNMWIDVVAMHHDQALWGPQVNEFHPERFQNDVVSGGCTHKMGYLPFGFGGRMCVGRHLTFMEYKIVLTLILSRFSFSLSPDYQHSPSIMLSLRPAHGLPLVFRLLDD 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4707730 4711966 + ClCG01G004430.2 Cla01g00435 264024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g00435 524 Pfam Cytochrome P450 76 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00435 524 Gene3D Cytochrome P450 33 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00435 524 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 12 518 - -
Cla01g00435 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Cla01g00435 524 PANTHER CYTOCHROME P450 FAMILY MEMBER 12 518 - -
Cla01g00435 524 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00435 524 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00435 524 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00435 524 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00435 524 SUPERFAMILY Cytochrome P450 80 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00435 524 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00435 524 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00435 524 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00435 524 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla01g00435 524 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla01g00435 Cla05g00887 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00435 Cla-Chr1:4707730 Cla05g01247 Cla-Chr5:14366775 1.30E-111 dispersed
Cla01g00435 Cla-Chr1:4707730 Cla05g00887 Cla-Chr5:8738876 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g00435 - - csv:101220403 896.345