Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g00571 ATGAGTGGCGGTGGCAGTGGCACTCCTCGAAGCACTAGGGATTTGATCTGCAACGCCGGTGCCGGTGCTGCCGCAGTTACTTGCCCGTTCAATATGCGCATTGAGTTTGTGATTAGGGATTATTTAGCATTCGTGTATTATGTTGTGCGTTCTATAGCAGCCACGTTCGTTTGCCCCTTAGATGTCATCAAGACGAGGCTGCAAGTGCATGGTCTTCCATCTGGTCAACGAGGAGGTAGTATTATTATCACTAGCCTACAAGACATAATGCGTTCTGAAGGTTTCAGGGGAATGTACCGTGGCCTTTCACCAACAATAGTAGCGCTTCTTCCAAACTGGGCTGTGAATGTGCCAAATTTATGGTTGTTTGCCAGTACTCAAGCCCATGTCTACTTCACAGTTTATGAGCATCTAAAAGGCCTACTTCATTCAGATGGGGACGATGGTCATCAACTCTCATTTGGGGAACATATGGTTGCTGCTGCTGGAGCTGGGGCATCTACTGCCATTGCAACAAATCCTTTGTGGGTTGTTAAGACAAGACTCCAAACACAGGGAATGAGGCCTGGTGTGGTTCCTTACACAGGCATGGTTTCAGCATTTACCAGGATTGTACAGGAAGAAGGAATTCGTGGGCTTTACAGGTTTGTTCTCACCATATTTGTGAAAATTGAAGTTCTTAATAGCATGCCTTTGATTTGTTCTATGAACAGTGGTATCATCCCTTCATTAGTTGGGATAAGTCATGTTGCAATTCAATTTCCTGCATACGAAAAGCTCAAATCCTATATGGCAGAAAGAGATAACACGACCATTGACAAGCTAAGTCCAGGACATTTAGCTATTGCCTCCTCGTTGTCGAAAATTACAGCCTCTGTAATGACTTACCCACATGAGGTAGTTCGTTCCCGGCTACAAGAGCAAGGCCAAGCCAGAAACGTTGCTCCTCAATACTCAGGAGTAATGGACTGTATCAAAAAGGTTTTTCGAAAGGAAGGTCTCCCCGGTTTTTATAGAGGTTGTGCGACGAATCTGTTGCGAACAACTCCATCCGCTGTAATAACTTTCACCAGCTATGAAATGATACATAGGTTCCTACTGCGAGTTATACCTTCAAGTGAGGAGAAATATTCCGAAACTCAACCGAATTCCGATAGCAGTAGCCATGTGAAGCCCCAAATGGGGATCAGAGACGACTCAAAGGAAGATAGTGATTCCAGCATACAACAATCACAATCCCAACCAAGTAAGCAAACTAGAATTCCTCTGGGGAATAAAGAACACTTAACATCTAGACATTGA 1302 44.47 MSGGGSGTPRSTRDLICNAGAGAAAVTCPFNMRIEFVIRDYLAFVYYVVRSIAATFVCPLDVIKTRLQVHGLPSGQRGGSIIITSLQDIMRSEGFRGMYRGLSPTIVALLPNWAVNVPNLWLFASTQAHVYFTVYEHLKGLLHSDGDDGHQLSFGEHMVAAAGAGASTAIATNPLWVVKTRLQTQGMRPGVVPYTGMVSAFTRIVQEEGIRGLYRFVLTIFVKIEVLNSMPLICSMNSGIIPSLVGISHVAIQFPAYEKLKSYMAERDNTTIDKLSPGHLAIASSLSKITASVMTYPHEVVRSRLQEQGQARNVAPQYSGVMDCIKKVFRKEGLPGFYRGCATNLLRTTPSAVITFTSYEMIHRFLLRVIPSSEEKYSETQPNSDSSSHVKPQMGIRDDSKEDSDSSIQQSQSQPSKQTRIPLGNKEHLTSRH 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6431391 6435636 + ClCG01G005850.2 Cla01g00571 264160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g00571 433 MobiDBLite consensus disorder prediction 376 391 - -
Cla01g00571 433 Gene3D Mitochondrial carrier domain 2 116 IPR023395 -
Cla01g00571 433 SUPERFAMILY Mitochondrial carrier 51 361 IPR023395 -
Cla01g00571 433 PANTHER BNAC06G30010D PROTEIN 236 374 - -
Cla01g00571 433 ProSiteProfiles Solute carrier (Solcar) repeat profile. 152 241 IPR018108 -
Cla01g00571 433 MobiDBLite consensus disorder prediction 406 425 - -
Cla01g00571 433 MobiDBLite consensus disorder prediction 376 433 - -
Cla01g00571 433 ProSiteProfiles Solute carrier (Solcar) repeat profile. 42 126 IPR018108 -
Cla01g00571 433 ProSiteProfiles Solute carrier (Solcar) repeat profile. 275 365 IPR018108 -
Cla01g00571 433 Pfam Mitochondrial carrier protein 51 117 IPR018108 -
Cla01g00571 433 Pfam Mitochondrial carrier protein 276 367 IPR018108 -
Cla01g00571 433 Pfam Mitochondrial carrier protein 151 221 IPR018108 -
Cla01g00571 433 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 6 224 IPR044712 GO:0006862|GO:0055085
Cla01g00571 433 Gene3D Mitochondrial carrier domain 117 369 IPR023395 -
Cla01g00571 433 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 236 374 IPR044712 GO:0006862|GO:0055085
Cla01g00571 433 PANTHER BNAC06G30010D PROTEIN 6 224 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00571 Cla-Chr1:6431391 Cla09g00508 Cla-Chr9:4790154 5.83E-13 dispersed
Cla01g00571 Cla-Chr1:6431391 Cla08g01324 Cla-Chr8:26123631 4.63E-27 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g00571 K15115 - csv:101216902 610.527