Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g00596 ATGACCAAAGAGGAAGATTTTAAGCTACTAAAGTTTCAGACTTGTGATCTCAGAGTGAACATTCACTGTGATGGGTGTAGGCAGAAAGTCAAGAAACTTCTTCAGAGGATAGAAGGAGTGTTTCAGGTTGCCATAGGTGCAGAGAATCAAAAGGTTACCGTTTTAGGAAATGTGGATCCTGCAACTTTGATCAATAAGTTGGTGAGAGCTGGAAAACATGCTGAGCTTTGGTCACAGAAAGCAAACACGAGCCCGAAACCGAAGAACAAAGACGATAAGACTCCGAACAAGGAACCAAAGCATCTCAAACTGACCTCATTCAACTGTGAAGATGACGACATTGTTGATTGTGTTGAGGAAGGAGAAGATTATGAAGCTGCACAACTTCAGTTCAGAGCAGCTAATCTTGATCTCCTTAGGCAGCAAGCAATCGAAGCGAACAATGCTGGGAAAGGCATTGGGATCAACCGAATTCCCGGGCTAAATGGCAAGATGAACAACAACATCAACATCAACAACAAACCTGGGAATGGAAAGAAAATAGACCCTAATCAGCCAATGGCAATAAAAAACACCCCATCTGAGATTGACCGAAAAACTTTGGCAGCTCTGAAGATGAACAATGCTCAACTATTCGGTAACGGCCGAGAAAGTATCAATCTCGGGGAAGCAAAAAGAGCAAACAACAACGATTTGAGTTCAATGATGAGCATGGCAGGGTTCAACGGTGGCAACCTTTTGAATTTTGCCACTCCGTCTTCCATTGATGTCAATTCAACAAACACCTCTCAAGGACTTCACCTCCAACAGAACAATGGCTATGGCTATGGCTACCAGCCATCATCAACCTCTGGATTCTCCATGGCAACTGGTCAATATCATCATCAACAACAACAACAACAACAACAACAACAACAACAACAACCAACCTTCATCAATGGCTACAATCAATACCATCAGCAGCAACCATTGATGAACATGAACAACATGGTAAATAGACAAGCAATGAACCAGCAGCCTCAAATGATGTACAATAGAGCTCAATTGGTTCCACCAAACACAGGATATTACTTCAATTACAATCCAAGCCCTGTTCATCCAAGTTATCCTTATGTTCATGGCCACAATAGTAACTCTGCAGCTGAGATGTTCAGTGATGAGAACACAAGCAGCAGTTGCTCAATCATAAATCAGACTTTGATGTCTTGGTGTAAGGTAAGAAAAATCCGCGGCATTTTCATTTTTCATATGGTACCGCCAGAAATGTCCCTTCATCTCACTTATCCACTCCCGATATTCCCTCGCCAGAATGGCCTCCGGACCAAATCTCAGCCATCGCCCCCGAAGTCGATCGTCTCCTGCTCCGCTCTCAAACGCTACACCGCTGGATGTAAAAGGCAGTATACGAGTGTGATGATAGTTCCGACTGGCGTAGGCGCAGCCATTGGTGGATACGCAGGCGACGCTCTCCCGGTTGCTCGTGCCCTCGCCTCCGTCGTTGATTGCCTTATTACTCACCCTAATGTGCTAAATGCAGCAATGCTTTACTGGCCGATGCATAATGTGCTTTATGTTGAAGGCTATGCACTAGATCGGTTTGCAGAAGGTTCATGGGCCCTAGAGCCTGTTCACCAGAATCGGGTAGGATTGGTTCTTGATGCTGCAATGGAGGAAGAGCTTCGAATTCGTCACTTGCAAGTGGCTGATGCTGCTAGAGCTTCTCTTGGATTGCCCGTGATGGAATATGTTGTCACAGATACACCTCTAATGGTAGAGAAGTGGATTGATCCAAAAACTGGGCAATCAACTGGGAGGATAAGACATCCTGCCTCACTGCTTAGAGCCGTGCAGACATTAATGAACCGGTCGAAGGTGAATGCGGTTGCAGTTGTTGGACGATTCCCAGACGACGATGATGAAGAGACAGACAATTATCGACAAGGGATGGGAGTTGATACTTTGGCAGGGGTTGAGGCTATTATTAGCCATCTTGTGGTGAAGGAGTTTCAGATTCCATGTGCTCATGCTCCTGCTTTGTCACCTACTCCCTTATGCACATCTCTATCTCCAAAATCAGCAGCAGAGGAGTTAGGATTCACATTCTTACCATGTGTACTTTCTGGGCTAAGTAATGCGCCTCAATACTTGAGCAAGAATTCTCAATCATTGGGGAAGGACTGCATATTGGCAGATGATGTTGATAGTGTCATTGTACCTATAAATGCATGTGGAGGGGATGGCACTCTTGCTTTTGCCAGAAGCAAACAGTTCAAGCCACTTATTATTGCGGTCGAGGAAAATGAAACAGTTCTCAGCGATTCTCCAGAGTCACTTGGGATTGAGGCGGTAAAAGTCTCAAATTATTGGGAAGCCATAGGTGTTGTTGCAGCTCACAAGGCAGGAATAGATCCTTATTCCCTTCGAAGAAATAGGATCAACAACATTAATTGCATTTCCAGTACATCTCCTAATGGCCACGCAGTCTCAAGTGCCCCCCCGACAATTCAACTGAGCTATCTGCAGGATCTGTTGAATTCACCTACAAAAGTTGTTTATACATATTCAACACCTATTTACCAGGGAGGTCGATCGCCGGCGCCGGAGACCGGAAGCAGGGAGAATTTTGAGGCATTGAATGATGATGGGTCTTCTTGTTCGTCTTCTTGGTTGGATTGCCTTTCGGAAGTGGTCGGAGCAATTCAGGCGGCGAAGCGGCTTCTGTACACGGCTTTGACTTTCTCTGTGTGCGACGAGGAGGGCTGTGCGACTTCAACGGAGGGAGCTACTAAAAAATTGGTTCTACAATTCCAATACGTGACAACAAGATTGGAAACTGCACTCTCAAATCTGCCATACGAACACTTTTGTGTCTCAGATGAAGTACAAGAACAGGTTGATTTGGTTAGAGCTCAACTGAGGAGAGCATCAAACAAGTACGAATCTATGTCTAACCCTAAAGAAAAGAAGCTTCAAGCTAGGTCAGGTTCTGTAAAATGGATGATCAGTAATGATGTCAAGAGCATGTCTAGTGTTGATGATGGAGATGTCGAGTCTCAGCATCATCGTCCTCGGAACCGCGACCACTTGACTAGTTTCGATTCGTTGAATTCTTGCTTTGATGATTGTTCAAGTGTTGTTCATTCTGATATGGAAGATGTTATAGCAAGCAAGAGCCAAGATGAGGTTAAAAAGCCTGTTGAAATTGAAATTCCTGAAAACTTCCTATGCCCCATTTCCTTTGAGTTGATGTTGAATCCCGTCATTGTCTCTACGGGACAGACATATGAAAGATCCAACATACAGAATTGGATAGACAGAGGAAATAGAATATGTCCAAAAACTCAAGAGCAGCTCCAATCTCTGATCCTCACTCCAAATTTTGTTATGAGAAAATTGATCTCTGAATGGTGTGAAGAGCATAATGTGAAGCTAGAGGAAGGATTAACCAACAGGAAACTTAAGAAGTATAGATCATTTGAGGACGATTGCCAAAGGACTGTGTCGATCAAAACTCTGGTTCGACACCTTTCATTCGGGTCGATTCAGGAGCAGAAGATCGCCGTGACCGAGATTCGAAAGCTATCAAAAAGTAGCTCAGATCATAGAGTTGAAATAGCAGAAGCAGGAGCAATCCCACAACTGGTTAACCTTTTAACTTCAAAGGATGTTGCAACACAAGAGAATGCAATTTCTTGCATTCTCAACCTTTCACTTCAAGAGCAAAACAAAAGACTTATTATGCTTTCTGGTGCTGTTTCTTACATTTCGCAAGTCCTCAAAGTTGGGAGCATGGAAGGGAGAGAGTGTGCCGCTGCAACAATTTACAGCTTGTCATTAGCCGATGAGAACAAGGCGATAATTGGGGCTTCCGGAGTGATCTCGGACCTGTTAGAAATCCTCGAGATCGGTAGTCCGAGAGGGCAAAAAGATGCTGCAGGAGCTCTATTGAATTTGTGTATGCACCAAGGGAATAAGGGCAGGGCTTTGAAGGTTGGGATTGTCAAACCATTGTTGAAAATGCTCTCTGATTCAAATGGTTCTTTGGTTGATGATGCTCTCTATATAATGTCGGTACTTTGCGGCCATCCAGAGGCGAAGGCTACGATGTCGAATGCGAATTCACTACTTGTTTTGACTGACATTCTGAAGACGGGGTCGCCTCGCAGCAAGGAAAATGCAGCTGCTGTTCTGCTTGCATTATGCAAGGGAGATTGGGAGAAGCTGGAATGGTTAACCAGACTTGGCGTGGTGGTGTCGTTGATGAAACTTGCCAATAATGGCACGGCGAGAGCGAGGCGAAAGGCTGCTTTATTGTTGGACCAACTCGGAAAATCATGA 4338 44.56 MTKEEDFKLLKFQTCDLRVNIHCDGCRQKVKKLLQRIEGVFQVAIGAENQKVTVLGNVDPATLINKLVRAGKHAELWSQKANTSPKPKNKDDKTPNKEPKHLKLTSFNCEDDDIVDCVEEGEDYEAAQLQFRAANLDLLRQQAIEANNAGKGIGINRIPGLNGKMNNNININNKPGNGKKIDPNQPMAIKNTPSEIDRKTLAALKMNNAQLFGNGRESINLGEAKRANNNDLSSMMSMAGFNGGNLLNFATPSSIDVNSTNTSQGLHLQQNNGYGYGYQPSSTSGFSMATGQYHHQQQQQQQQQQQQQPTFINGYNQYHQQQPLMNMNNMVNRQAMNQQPQMMYNRAQLVPPNTGYYFNYNPSPVHPSYPYVHGHNSNSAAEMFSDENTSSSCSIINQTLMSWCKVRKIRGIFIFHMVPPEMSLHLTYPLPIFPRQNGLRTKSQPSPPKSIVSCSALKRYTAGCKRQYTSVMIVPTGVGAAIGGYAGDALPVARALASVVDCLITHPNVLNAAMLYWPMHNVLYVEGYALDRFAEGSWALEPVHQNRVGLVLDAAMEEELRIRHLQVADAARASLGLPVMEYVVTDTPLMVEKWIDPKTGQSTGRIRHPASLLRAVQTLMNRSKVNAVAVVGRFPDDDDEETDNYRQGMGVDTLAGVEAIISHLVVKEFQIPCAHAPALSPTPLCTSLSPKSAAEELGFTFLPCVLSGLSNAPQYLSKNSQSLGKDCILADDVDSVIVPINACGGDGTLAFARSKQFKPLIIAVEENETVLSDSPESLGIEAVKVSNYWEAIGVVAAHKAGIDPYSLRRNRINNINCISSTSPNGHAVSSAPPTIQLSYLQDLLNSPTKVVYTYSTPIYQGGRSPAPETGSRENFEALNDDGSSCSSSWLDCLSEVVGAIQAAKRLLYTALTFSVCDEEGCATSTEGATKKLVLQFQYVTTRLETALSNLPYEHFCVSDEVQEQVDLVRAQLRRASNKYESMSNPKEKKLQARSGSVKWMISNDVKSMSSVDDGDVESQHHRPRNRDHLTSFDSLNSCFDDCSSVVHSDMEDVIASKSQDEVKKPVEIEIPENFLCPISFELMLNPVIVSTGQTYERSNIQNWIDRGNRICPKTQEQLQSLILTPNFVMRKLISEWCEEHNVKLEEGLTNRKLKKYRSFEDDCQRTVSIKTLVRHLSFGSIQEQKIAVTEIRKLSKSSSDHRVEIAEAGAIPQLVNLLTSKDVATQENAISCILNLSLQEQNKRLIMLSGAVSYISQVLKVGSMEGRECAAATIYSLSLADENKAIIGASGVISDLLEILEIGSPRGQKDAAGALLNLCMHQGNKGRALKVGIVKPLLKMLSDSNGSLVDDALYIMSVLCGHPEAKATMSNANSLLVLTDILKTGSPRSKENAAAVLLALCKGDWEKLEWLTRLGVVVSLMKLANNGTARARRKAALLLDQLGKS 1445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6813192 6827830 - ClCG01G006100.2 Cla01g00596 264185

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g00596 1445 SUPERFAMILY ARM repeat 1168 1442 IPR016024 -
Cla01g00596 1445 Coils Coil 958 978 - -
Cla01g00596 1445 Gene3D - 12 83 - -
Cla01g00596 1445 CDD HMA 16 75 IPR006121 GO:0046872
Cla01g00596 1445 Pfam U-box domain 1070 1141 IPR003613 GO:0004842|GO:0016567
Cla01g00596 1445 PANTHER OS01G0127400 PROTEIN 424 831 IPR021763 -
Cla01g00596 1445 SMART arm_5 1239 1279 IPR000225 GO:0005515
Cla01g00596 1445 SMART arm_5 1198 1238 IPR000225 GO:0005515
Cla01g00596 1445 SMART arm_5 1280 1320 IPR000225 GO:0005515
Cla01g00596 1445 SMART arm_5 1362 1402 IPR000225 GO:0005515
Cla01g00596 1445 SMART arm_5 1321 1361 IPR000225 GO:0005515
Cla01g00596 1445 MobiDBLite consensus disorder prediction 285 308 - -
Cla01g00596 1445 Pfam Heavy-metal-associated domain 17 71 IPR006121 GO:0046872
Cla01g00596 1445 Gene3D - 1286 1444 IPR011989 -
Cla01g00596 1445 ProSiteProfiles Heavy-metal-associated domain profile. 20 76 IPR006121 GO:0046872
Cla01g00596 1445 MobiDBLite consensus disorder prediction 1010 1027 - -
Cla01g00596 1445 ProSiteProfiles U-box domain profile. 1069 1143 IPR003613 GO:0004842|GO:0016567
Cla01g00596 1445 Gene3D - 1166 1285 IPR011989 -
Cla01g00596 1445 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1209 1251 IPR000225 GO:0005515
Cla01g00596 1445 SUPERFAMILY RING/U-box 1065 1143 - -
Cla01g00596 1445 MobiDBLite consensus disorder prediction 75 101 - -
Cla01g00596 1445 CDD RING-Ubox_PUB 1074 1116 IPR045210 -
Cla01g00596 1445 Pfam Protein of unknown function (DUF3326) 469 808 IPR021763 -
Cla01g00596 1445 MobiDBLite consensus disorder prediction 1008 1027 - -
Cla01g00596 1445 SMART Ubox_2 1073 1136 IPR003613 GO:0004842|GO:0016567
Cla01g00596 1445 SUPERFAMILY HMA, heavy metal-associated domain 14 78 IPR036163 GO:0046872
Cla01g00596 1445 MobiDBLite consensus disorder prediction 85 101 - -
Cla01g00596 1445 Pfam Armadillo/beta-catenin-like repeat 1198 1237 IPR000225 GO:0005515
Cla01g00596 1445 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1069 1145 IPR013083 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g00596 - - - cmax:111489474 863.218
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cla01g00596 Cla07g00605 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00596 Cla-Chr1:6813192 Cla07g00605 Cla-Chr7:11031387 1.16E-177 dispersed
Cla05g00578 Cla-Chr5:5296216 Cla01g00596 Cla-Chr1:6813192 3.85E-25 dispersed
Cla06g00546 Cla-Chr6:6611238 Cla01g00596 Cla-Chr1:6813192 1.23E-24 dispersed
Cla01g00596 Cla-Chr1:6813192 Cla03g00152 Cla-Chr3:1576062 4.60E-116 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g412 . . . . . Bpe10g00993 Bma14g01592 . Cmo04g01075 . Cma04g00997 . Car04g00936 Car04g00053 . . . . . . . . . . Cla07g00605 Cam07g0630 Cec07g0695 Cco07g0680 Clacu07g0636 Cmu07g0660 Cre07g1008 Cone13ag0773 Cone19ag0775 . . Lsi04g01143 . . Cme10g01508 Blo06g01023 Blo11g00735 . . Bpe11g01609 . . . . . Cmo15g00984 . Cma15g00946 . . . . . . . . . . . Cla01g00596 Cam01g0624 Cec01g0615 Cco01g0639 Clacu01g0615 Cmu01g0588 Cre09g1916 Lsi09g00646 Csa05g01046 . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cla10g01473 . 1 1041 U-box Gene Family AT5G15400 76.0 0.0e+00 1577.0
Cla02g01224 . 213 810 U-box Gene Family AT2G23140 65.2 9.6e-120 427.9
Cla08g01687 . 1 818 U-box Gene Family AT1G24330 56.7 1.8e-237 819.3
Cla11g01354 . 209 1001 U-box Gene Family AT1G24330 54.3 1.3e-216 750.0
Cla08g01687 . 1 817 U-box Gene Family AT1G67530 56.6 2.2e-235 812.4
Cla11g01354 . 209 1002 U-box Gene Family AT1G67530 53.2 3.4e-212 735.3
Cla01g02188 . 1 362 U-box Gene Family AT4G21350 62.1 2.5e-120 429.1
Cla07g00206 . 135 460 U-box Gene Family AT3G07360 55.3 4.0e-82 302.0
Cla07g00605 CCT 312 499 U-box Gene Family AT1G71020 70.9 8.6e-73 271.6
Cla01g00596 CCT 1056 1255 U-box Gene Family AT1G71020 55.9 3.1e-54 209.9
Cla03g00152 CCT 263 432 U-box Gene Family AT1G71020 57.8 9.6e-48 188.3
Cla05g02163 . 279 444 U-box Gene Family AT1G71020 57.4 6.2e-47 185.7
Cla02g01975 CCT 255 425 U-box Gene Family AT1G71020 57.6 1.1e-46 184.9
Cla07g00605 CCT 63 703 U-box Gene Family AT1G23030 56.6 6.6e-110 395.2
Cla01g00596 CCT 881 1445 U-box Gene Family AT1G23030 53.3 2.1e-79 293.9
Cla02g01975 CCT 93 635 U-box Gene Family AT2G28830 50.8 1.3e-99 360.9
Cla03g00152 CCT 93 637 U-box Gene Family AT2G28830 58.3 1.6e-97 354.0
Cla03g00152 CCT 1 671 U-box Gene Family AT3G46510 66.6 5.0e-164 575.1
Cla02g01975 CCT 3 638 U-box Gene Family AT3G46510 66.3 5.9e-157 551.6
Cla05g02163 . 16 653 U-box Gene Family AT3G46510 56.1 1.0e-116 417.9
Cla05g02163 . 12 655 U-box Gene Family AT3G54850 65.6 3.6e-159 558.9
Cla02g01975 CCT 13 628 U-box Gene Family AT3G54850 57.3 2.4e-115 413.3
Cla03g00152 CCT 8 632 U-box Gene Family AT3G54850 55.0 1.7e-100 364.0
Cla02g00969 . 92 684 U-box Gene Family AT5G42340 60.0 2.1e-122 436.8
Cla04g00653 . 9 669 U-box Gene Family AT5G01830 57.4 1.4e-198 689.9
Cla03g00696 . 1 711 U-box Gene Family AT1G29340 68.1 3.4e-246 848.2
Cla05g01204 . 27 442 U-box Gene Family AT5G37490 51.7 1.2e-110 397.1
Cla04g00523 . 4 422 U-box Gene Family AT3G52450 52.4 3.2e-119 425.6
Cla10g01740 . 1 403 U-box Gene Family AT3G52450 50.7 2.4e-114 409.5
Cla10g01740 . 1 403 U-box Gene Family AT2G35930 55.6 4.7e-120 428.3
Cla04g00523 . 7 422 U-box Gene Family AT2G35930 51.4 3.7e-117 418.7
Cla05g01082 . 9 426 U-box Gene Family AT3G19380 64.1 3.6e-147 518.5
Cla05g01082 . 1 426 U-box Gene Family AT1G49780 64.3 1.1e-151 533.5
Cla01g01528 CCT 1 407 U-box Gene Family AT5G64660 54.2 2.6e-121 432.6
Cla01g01528 CCT 1 407 U-box Gene Family AT5G09800 51.3 6.6e-106 381.3
Cla05g02664 . 1 454 U-box Gene Family AT3G49810 62.6 2.1e-153 539.3
Cla08g01635 . 1 454 U-box Gene Family AT3G49810 61.9 9.6e-151 530.4
Cla08g01635 . 1 454 U-box Gene Family AT5G65920 62.8 4.7e-150 528.1
Cla05g02664 . 1 454 U-box Gene Family AT5G65920 61.3 2.9e-147 518.8
Cla05g00164 CCT 1 918 U-box Gene Family AT2G45910 50.3 8.7e-230 793.9
Cla11g00152 . 4 747 U-box Gene Family AT2G19410 50.6 6.7e-208 721.1
Cla01g00454 . 48 843 U-box Gene Family AT4G25160 50.7 1.0e-217 753.8
Cla06g01636 . 1 478 U-box Gene Family AT5G65200 50.1 2.9e-88 323.2
Cla09g01823 . 1 551 U-box Gene Family AT5G40140 53.9 1.6e-94 344.0
Cla06g01636 . 27 477 U-box Gene Family AT5G40140 51.5 2.1e-59 227.3
Cla01g01396 . 29 498 U-box Gene Family AT5G40140 52.1 2.9e-56 216.9
Cla08g00936 . 77 885 U-box Gene Family AT1G76390 61.2 4.1e-269 924.5
Cla08g00936 . 86 885 U-box Gene Family AT1G20780 61.7 4.8e-278 954.1
Cla08g01687 . 1 820 U-box Gene Family AT1G27910 59.6 1.4e-261 899.4
Cla11g01354 . 209 1013 U-box Gene Family AT1G27910 57.8 1.1e-247 853.2
Cla01g01716 . 394 985 U-box Gene Family AT5G67530 74.0 3.4e-260 894.4
Cla05g00226 . 77 207 U-box Gene Family AT5G67530 55.7 5.9e-39 159.5
Cla10g01783 . 12 150 U-box Gene Family AT5G67530 50.4 1.1e-37 155.2
Cla05g00413 . 48 530 U-box Gene Family AT1G04510 70.6 3.1e-193 671.8
Cla05g00413 . 48 504 U-box Gene Family AT2G33340 72.5 8.4e-193 670.2
Cla07g00205 . 10 278 U-box Gene Family AT3G07370 66.9 3.0e-102 368.6
Cla10g01473 . 1 1041 U-box Gene Family AT5G15400 76.0 0.0e+00 1577.0
Cla02g01224 . 213 810 U-box Gene Family AT2G23140 65.2 9.6e-120 427.9
Cla08g01687 . 1 818 U-box Gene Family AT1G24330 56.7 1.8e-237 819.3
Cla11g01354 . 209 1001 U-box Gene Family AT1G24330 54.3 1.3e-216 750.0
Cla08g01687 . 1 817 U-box Gene Family AT1G67530 56.6 2.2e-235 812.4
Cla11g01354 . 209 1002 U-box Gene Family AT1G67530 53.2 3.4e-212 735.3
Cla01g02188 . 1 362 U-box Gene Family AT4G21350 62.1 2.5e-120 429.1
Cla07g00206 . 135 460 U-box Gene Family AT3G07360 55.3 4.0e-82 302.0
Cla07g00605 CCT 312 499 U-box Gene Family AT1G71020 70.9 8.6e-73 271.6
Cla01g00596 CCT 1056 1255 U-box Gene Family AT1G71020 55.9 3.1e-54 209.9
Cla03g00152 CCT 263 432 U-box Gene Family AT1G71020 57.8 9.6e-48 188.3
Cla05g02163 . 279 444 U-box Gene Family AT1G71020 57.4 6.2e-47 185.7
Cla02g01975 CCT 255 425 U-box Gene Family AT1G71020 57.6 1.1e-46 184.9
Cla07g00605 CCT 63 703 U-box Gene Family AT1G23030 56.6 6.6e-110 395.2
Cla01g00596 CCT 881 1445 U-box Gene Family AT1G23030 53.3 2.1e-79 293.9
Cla02g01975 CCT 93 635 U-box Gene Family AT2G28830 50.8 1.3e-99 360.9
Cla03g00152 CCT 93 637 U-box Gene Family AT2G28830 58.3 1.6e-97 354.0
Cla03g00152 CCT 1 671 U-box Gene Family AT3G46510 66.6 5.0e-164 575.1
Cla02g01975 CCT 3 638 U-box Gene Family AT3G46510 66.3 5.9e-157 551.6
Cla05g02163 . 16 653 U-box Gene Family AT3G46510 56.1 1.0e-116 417.9
Cla05g02163 . 12 655 U-box Gene Family AT3G54850 65.6 3.6e-159 558.9
Cla02g01975 CCT 13 628 U-box Gene Family AT3G54850 57.3 2.4e-115 413.3
Cla03g00152 CCT 8 632 U-box Gene Family AT3G54850 55.0 1.7e-100 364.0
Cla02g00969 . 92 684 U-box Gene Family AT5G42340 60.0 2.1e-122 436.8
Cla04g00653 . 9 669 U-box Gene Family AT5G01830 57.4 1.4e-198 689.9
Cla03g00696 . 1 711 U-box Gene Family AT1G29340 68.1 3.4e-246 848.2
Cla05g01204 . 27 442 U-box Gene Family AT5G37490 51.7 1.2e-110 397.1
Cla04g00523 . 4 422 U-box Gene Family AT3G52450 52.4 3.2e-119 425.6
Cla10g01740 . 1 403 U-box Gene Family AT3G52450 50.7 2.4e-114 409.5
Cla10g01740 . 1 403 U-box Gene Family AT2G35930 55.6 4.7e-120 428.3
Cla04g00523 . 7 422 U-box Gene Family AT2G35930 51.4 3.7e-117 418.7
Cla05g01082 . 9 426 U-box Gene Family AT3G19380 64.1 3.6e-147 518.5
Cla05g01082 . 1 426 U-box Gene Family AT1G49780 64.3 1.1e-151 533.5
Cla01g01528 CCT 1 407 U-box Gene Family AT5G64660 54.2 2.6e-121 432.6
Cla01g01528 CCT 1 407 U-box Gene Family AT5G09800 51.3 6.6e-106 381.3
Cla05g02664 . 1 454 U-box Gene Family AT3G49810 62.6 2.1e-153 539.3
Cla08g01635 . 1 454 U-box Gene Family AT3G49810 61.9 9.6e-151 530.4
Cla08g01635 . 1 454 U-box Gene Family AT5G65920 62.8 4.7e-150 528.1
Cla05g02664 . 1 454 U-box Gene Family AT5G65920 61.3 2.9e-147 518.8
Cla05g00164 CCT 1 918 U-box Gene Family AT2G45910 50.3 8.7e-230 793.9
Cla11g00152 . 4 747 U-box Gene Family AT2G19410 50.6 6.7e-208 721.1
Cla01g00454 . 48 843 U-box Gene Family AT4G25160 50.7 1.0e-217 753.8
Cla06g01636 . 1 478 U-box Gene Family AT5G65200 50.1 2.9e-88 323.2
Cla09g01823 . 1 551 U-box Gene Family AT5G40140 53.9 1.6e-94 344.0
Cla06g01636 . 27 477 U-box Gene Family AT5G40140 51.5 2.1e-59 227.3
Cla01g01396 . 29 498 U-box Gene Family AT5G40140 52.1 2.9e-56 216.9
Cla08g00936 . 77 885 U-box Gene Family AT1G76390 61.2 4.1e-269 924.5
Cla08g00936 . 86 885 U-box Gene Family AT1G20780 61.7 4.8e-278 954.1
Cla08g01687 . 1 820 U-box Gene Family AT1G27910 59.6 1.4e-261 899.4
Cla11g01354 . 209 1013 U-box Gene Family AT1G27910 57.8 1.1e-247 853.2
Cla01g01716 . 394 985 U-box Gene Family AT5G67530 74.0 3.4e-260 894.4
Cla05g00226 . 77 207 U-box Gene Family AT5G67530 55.7 5.9e-39 159.5
Cla10g01783 . 12 150 U-box Gene Family AT5G67530 50.4 1.1e-37 155.2
Cla05g00413 . 48 530 U-box Gene Family AT1G04510 70.6 3.1e-193 671.8
Cla05g00413 . 48 504 U-box Gene Family AT2G33340 72.5 8.4e-193 670.2
Cla07g00205 . 10 278 U-box Gene Family AT3G07370 66.9 3.0e-102 368.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003338 2 7 0 1 1 1 1 1 2 2 1 1 1 2 2 2 1 1 2 1 2 1 3 2 1 2 1 2 1 2 49
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cla01g00596 Cla_Chr01 FPKM 11.938884 12.748365 11.887774 10.136308 9.830935 9.949346 9.428361 13.499813 13.901864 13.702514