Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g00642 ATGTCTTCCCCATCCTTTCCTCCTTCCATGGAGCCTCCCGCCCAACAGATCCCTCTCTTACCTTCCCGTCAGCCCTCCAACTCTGACGGCTCCACTTCCCCCATCGGCCCCCTCGCCCTTCTCTTGGGCCGCGCCACTGGCCGCCGTGGAACTTCTATGCTGGTTCGGGAGACGGCGGCACGTGAACTTGAAGAGCGCCGCATCGATTGGGGCTATTCCAAGCCTGTGGTAGCCCTTGACATTACGTGGAATTTAGCTTTTGTTTTCGTTTCCCTGGGTGTGCTTATTCACTCCGCCGATGAAAAACCCAATACGCCAATTCGGCTTTGGATTGTTGTTTATGCGGCTCAGTGCTTGGTGCACGCTGTGCTTGTGTGGTTTGAATTCAGAAGGAGGAATGCGAGGACGGCTAGGGATATGGAGACGCAGCAACAGCAGCAGTCTGATGGATATGTAACTAATGAAAGCGATGAAGAAGATGGTAGCCCCAGGAACATGTCCGGTGTTGTGAAAAGATGCGAGTCAGTAAACACTCTGGTATCGTTAATTTGGTGGTTGTTTGGCTTTTACTGGGTTGTGGCTGGTGGTAACATCCTCATGCAGAATGCCCCATCTTTATACTGGTATGATTTTGAACTGCTGGCTGTCGTATTCCTGGCATTTGATGTGTTCTTTGCAGTCTTTTGTGTTGTTTTGGCATGTTTGATAGGAATTGCTCTCTGTTGCTGCTTGCCTTGCATTATAGCTATTCTTTATGCTGTTGCAGGCCAGGAAGGTGCAACCGATGCTGATTTAAGTATGCTTCCTAGATATCGGTATCAAGTGTCCAATGAGCCTTCTCCGGGGGATGGGTTGATGGTTCCGGTAGAAACTAGCAGTAGATACTTGACGACTGAGCGTGTTCTATCACGCGAGGATGCGTTTCATACATCTGTAGGTATAGAGATTGAACTACAGAGTTTAGATATTCTGTGTGTGAACAGTAGACGAAAGGAAATCTCATGGTCACTTCTTCCTGTAGTCTTAAATATTTATCTCCTGGAACACTTTTTGAGTTCAACGATATGCAAGGTAGGGATTGAATCTAGGTTCTTGTTGGCTGAAACACTAGTTTATCAGAATGCAAAGAGTCTTATGAGAAATGATAGGGAATTGGCGAGATTTAAGGAAGAAAGCGAGGAGGAAAATACACAATTAAGAGACCTTACTGAACAAAGTGTCAAACTTCTGCAGCTTTCCTAG 1242 46.86 MSSPSFPPSMEPPAQQIPLLPSRQPSNSDGSTSPIGPLALLLGRATGRRGTSMLVRETAARELEERRIDWGYSKPVVALDITWNLAFVFVSLGVLIHSADEKPNTPIRLWIVVYAAQCLVHAVLVWFEFRRRNARTARDMETQQQQQSDGYVTNESDEEDGSPRNMSGVVKRCESVNTLVSLIWWLFGFYWVVAGGNILMQNAPSLYWYDFELLAVVFLAFDVFFAVFCVVLACLIGIALCCCLPCIIAILYAVAGQEGATDADLSMLPRYRYQVSNEPSPGDGLMVPVETSSRYLTTERVLSREDAFHTSVGIEIELQSLDILCVNSRRKEISWSLLPVVLNIYLLEHFLSSTICKVGIESRFLLAETLVYQNAKSLMRNDRELARFKEESEEENTQLRDLTEQSVKLLQLS 413
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7398148 7403271 - ClCG01G006570.1 Cla01g00642 264231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g00642 413 MobiDBLite consensus disorder prediction 1 32 - -
Cla01g00642 413 MobiDBLite consensus disorder prediction 138 166 - -
Cla01g00642 413 MobiDBLite consensus disorder prediction 1 19 - -
Cla01g00642 413 Coils Coil 385 405 - -
Cla01g00642 413 PANTHER E3 UBIQUITIN PROTEIN LIGASE RIE1-LIKE 15 307 - -
Cla01g00642 413 PANTHER TARGET OF ERK KINASE MPK-1 15 307 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla01g00642 Cla05g02670 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00642 Cla-Chr1:7398148 Cla05g00192 Cla-Chr5:1731311 5.06E-77 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g00642 - K13148 cmo:103504433 493.426