Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g00658 ATGGATAGGGCAAATTTCAAGCACACTGCTTCAGCAATTACTGTCTTTGCACATATTTTTGGTCTCACTGCTTGCATTCTTATGCTTGTTTGGTTGTTGCATTATCGTGGCGGCCTTGCCTACGATTCTCCCAATCCCGACCTTGTTTTCAATTGCCACCCATTCTTCATGCTCCTCGGTTTCGTGTTGATGTCGGGGGAAGGTACTACAGCTAGCTCGACAATGATGGCCTACAAGACAGTGAGGGGAGAAAAGAAAACAAAGAAGATAGTTCACATGGCTCTGCATTTGGTAGCCATTTGCATGGGAATTGTAGGGATAAACGCTGCTTTCAAGTTTCATGATCAAGTGAACTTGGAGAATATGTTCAGTTTACATTCATGGATTGGCATTGTCACTTTCTGCCTTTACGGCTTACAGTGGCTTTTGGGACTATGTACATTCTTGTTTCCAGGAGCAGATGCAGAGACTAAAGCCAGGCTGCTGCCATGGCACATAAGTGGAGGAAGGGCTCTGTTGCTGATGATAATATGCACAGCATTGACTGGCTTCTCTGAGAAGGCTACTTCATTGAGATTGGCTGGCAACCATGAGTCCCGTTTGCTTAACTTCACTGCTTTCTTTGTCCTCCTCTTTGGAATTTCCATCGACCTCTCCATCGGTTTTGCTCGGTTTATGCATGTCGATCTCGCCATTTAG 699 45.21 MDRANFKHTASAITVFAHIFGLTACILMLVWLLHYRGGLAYDSPNPDLVFNCHPFFMLLGFVLMSGEGTTASSTMMAYKTVRGEKKTKKIVHMALHLVAICMGIVGINAAFKFHDQVNLENMFSLHSWIGIVTFCLYGLQWLLGLCTFLFPGADAETKARLLPWHISGGRALLLMIICTALTGFSEKATSLRLAGNHESRLLNFTAFFVLLFGISIDLSIGFARFMHVDLAI 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7705590 7707261 - ClCG01G006750.2 Cla01g00658 264247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g00658 232 ProSiteProfiles Cytochrome b561 domain profile. 16 221 IPR006593 -
Cla01g00658 232 PANTHER CYTOCHROME B561-RELATED 3 223 IPR043205 GO:0016491
Cla01g00658 232 Pfam Eukaryotic cytochrome b561 53 189 IPR006593 -
Cla01g00658 232 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Cla01g00658 232 SMART 561_7 52 184 IPR006593 -
Cla01g00658 232 Gene3D - 6 222 - -
Cla01g00658 232 CDD Cyt_b561_ACYB-1_like 43 191 - -
Cla01g00658 232 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 3-RELATED 3 223 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00658 Cla-Chr1:7705590 Cla09g01236 Cla-Chr9:16407007 9.41E-56 dispersed
Cla01g00658 Cla-Chr1:7705590 Cla11g00506 Cla-Chr11:5738605 5.14E-45 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g00658 K08360 - csv:101208884 408.297