Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g00665 ATGGTCAAATTTCCAATCACCATTATCATCAACCCTCTTCCTTCTCTCTTATTTACCTCTTCAACCACAAGTCAACATTTACACAACCTATTATGTTATTTTCTTCAATGCCCATTTGAAGAATCAAATCAAGAGGAAGTCATTTTGCCCTTGCCTAGGACCATTGCCCTACACCTTGCGCCGATCCTAAGATTAAGAAATAAGATAGACCCTTTGTCTGTGGGGGTGGGATACGGTTTCATTTGTACTACAGAAGTCGTATCAGGACAATTTCAAAGAAAAGAAACAATTTTGCTTCTTCATGCAATGGAAAGAAACATCTTTCAGCTTTCTCTTCTTCCTCTTGCTTTGCCAGTGATCTTTATCTTATTTGCTTTGGCTTCTTCAGCAGAACAAGAGGTTGTGACTTCAATAAAAACTGATGCTGCAGCTCTTCTTAAGTTCAAGGATTTGATTGACAAGGACCCAAATGGAGTGTTGTCCAGTTGGAAGCTTGAAAGCAATCCATGTTCGTGGTATGGAGTTTCATGTCAATCTAAACGAGTGGTGGCTCTTGATCTGAGTGGTTGTAATCTTGCAGGGAATGTTTATTTTGATCCTCTGTCTTCTATGGATATGTTGATGGCTTTGAATTTGTCTACAAATTCCTTCACTATAAACGCAACTACTTTGCTTCAGCTTCCTTATAATTTGCAGCAACTTGAGCTCTCTCTTGCCAAAGTTGTAGGTAGTGTGCCTGAGAATCTTTTCTCAAAGTGTCCAAACCTTGTGTTTGTGGATCTTTCATTCAACAATTTCACAGGCTATCTGCCTGAAAATCTTCTGTTGAATGCTAACAAGCTTCAAGATCTTGATCTCTCTTACAATAATCTAACTGGGTCGATCTCAGGATTGAGAATTAATGAGAATTCTTGCAACTCTTTGTTGCGGATTGAACTTTCGGCAAATCGAATCGTTGGTTCGATTCCAAGTTCCATTTCAAACTGCACGAATCTGCAAACACTTGGTTTGTCATACAATTTTCTCAGCGGGGAAATCCCAAGATCTTTAGGGGAACTCAGTAGTTTACAGAGGGTCGATATATCTCATAATCAACTCACTGGTTGGCTTCCTTCTGATTGGAGAAATGCCTGCAGTTCACTTCAAGAACTAAAGCTTTGCTACAACAACATTTCTGGTGTAATTCCTGCTTCCTTCTCTGCTTGCTCTTGGCTTCAAATTCTGGATCTTTCAAACAACAACATATCTGGTCCTTTACCAGATTCCATCTTCAAAAATCTTGTCTCTTTACAGAGCTTGCTATTGAGTAATAACGTAATCTCTGGACCATTGCCTTCAACCATATCTCACTGCAAGAAACTTCAGCTTGTAGACTTAAGTTCCAATAGAATTTCTGGTTTGATCCCACCAGGTATATGCCCAGGTGCTGAGTCACTCCAGGAACTGAAAATGCCAGACAATCTCATCATAGGAGGAATCCCACCTGAACTCTCACTGTGTTCACAGTTAAAGACAATTGATTTTAGTTTAAACTATCTGAATGGATCCATACCTGCAGAGCTTGGAAGGCTTCAGAATCTTGAACAGCTAATAGCATGGTTTAATAGCTTAGAAGGGAAAATCCCACCAGAATTGGGGAAGTGTAGAAGCTTGAAGGATGTTATACTAAATAACAATCGTTTAAGTGGTGAAATCCCCACTGAATTGTTCAGTTGTAGCAACCTTGAATGGGTTTCACTCACGAGTAATGAACTCATTGGTGAGGTCCCAAAAGAGTTTGGTCTTTTGTCAAGGCTGGCTGTGCTGCAACTCGGGAACAATAGCTTAAGTGGTCAGATACCAGAGGAGTTGGCGAACTGCAGCACTTTGGTTTGGTTGGATTTGAACAGCAACAAGCTTACTGGGGAAATCCCACCTAGACTTGGCAGGCAGCTTGGAGCCAAATCATTGAATGGGATTCTTTCTGGAAACACTCTAGTGTTCGTCCGAAATGTTGGGAATTCATGTAAAGGAGTTGGTGGTTTGTTAGAGTTTGCTGGAATCAGACCTGAAAGACTACAGCAGGAACCAACATTAAAGACCTGTGATTTCACTAGACTGTACTCCGGTCCGGTCCTCAGTCTGTTTACAAAGTACCAAACTTTGGAGTACTTGGATCTTTCTTACAACGAGCTTCGTGGGAGAATACCAGAAGAGTTTGGAGATATGGTTGCTTTGCAGGTTCTCGAATTATCGCATAACCAACTTTCTGGCGAGATTCCAGCATCATTTGGTCGCCTGAAGAACTTAGGAGTATTTGATGCATCACATAACAGACTGCAGGGTCACATTCCAGATTCATTCTCAAACTTATCATTCTTAGTGCAAATTGATCTATCTTACAATGAACTAACCGGGCGAATTCCATCAAGGGGACAGCTCAGTACACTGCCTGCAAGTCAGTATGCAAACAATCCAGGACTTTGTGGAGTTCCCTTGCCTGAATGCCAGAGTGATGACCAGCCACAGACAAGTCCTAATGTAGATGCTGGCAAAGGAAGAACAAAGCCAGAAGTAGGGTCATGGGTTAACAGTATTGTTTTAGGTGTTCTTATTTCCATTGCTTGTGTCTGCATTTTGATTGTATGGGCCATTGCCATGCGTGCAAGACGAAAAGAAGCAGAGGAAGTGAAGATGCTTAATAGTTTACAAGCAATACATGCCCCTACTACATGGAAAATTGACAAAGAGAAAGAGCCCCTGAGTATCAATGTGGCAACTTTCCAAAGACAACTAAGGAAGCTCAAGTTCTCCCAACTGATTGAAGCTACTAATGGCTTCTCAGCAGAAAGTCTCATAGGGAGTGGCGGGTTCGGTGAAGTGTTTAAAGCAACACTAAAGGATGGATCGAGTGTTGCAATCAAGAAACTGATACGCCTTAGTTGCCAGGGAGATCGTGAATTCATGGCAGAGATGGAAACTTTAGGAAAGATCAAACATGGAAACTTAGTACCTCTTCTGGGTTACTGTAAAATAGGTGAGGAGAGGCTTCTAGTGTATGAGTTTATGGAGTTTGGTAGCCTAGAAGAGATGCTTCACGGAAGAGCAAAGATGCAAGATCGAAGAATTCTAACATGGGATGAAAGGAAAAAGATTGCCAGAGGTGCTGCTAAAGGACTTTGTTTCCTACACCACAACTGCATTCCACACATAATACACAGAGACATGAAGTCCAGCAATGTACTCCTGGACCATGATTTAGAAGCAAGAGTTTCAGATTTCGGAATGGCAAGGCTGATAAGTGCTCTTGACACCCATCTGAGTGTAAGCACACTTGCAGGCACTCCTGGTTACGTCCCTCCTGAGTACTACCAAAGCTTCAGGTGCACAGCAAAAGGCGATGTCTATTCGTTTGGTGTCGTCCTCTTAGAACTCTTGACAGGGAAACGACCAACTGATAAGGAGGATTTTGGGGACACCAACTTGGTGGGATGGGTCAAAATGAAAGTGAATGATGGAAAACAAATGGAAGTGATTGATCCAGAGCTGCTGTCAGTAACCAAAGCAAGTGATGAATCAGAAGCAGAAGAGGTTAAAGAAATGGTTAGATATTTGGAGATAACTCTTCGGTGTGTAGAAGAGTTTCCTTCCAAAAGGCCTAACATGTTGCAGGTGGTGGCCATGCTGCGAGAGTTGATGCCGGGATCAAGCAATGGAAGCAGCAACAGTGCTTGA 3714 42.06 MVKFPITIIINPLPSLLFTSSTTSQHLHNLLCYFLQCPFEESNQEEVILPLPRTIALHLAPILRLRNKIDPLSVGVGYGFICTTEVVSGQFQRKETILLLHAMERNIFQLSLLPLALPVIFILFALASSAEQEVVTSIKTDAAALLKFKDLIDKDPNGVLSSWKLESNPCSWYGVSCQSKRVVALDLSGCNLAGNVYFDPLSSMDMLMALNLSTNSFTINATTLLQLPYNLQQLELSLAKVVGSVPENLFSKCPNLVFVDLSFNNFTGYLPENLLLNANKLQDLDLSYNNLTGSISGLRINENSCNSLLRIELSANRIVGSIPSSISNCTNLQTLGLSYNFLSGEIPRSLGELSSLQRVDISHNQLTGWLPSDWRNACSSLQELKLCYNNISGVIPASFSACSWLQILDLSNNNISGPLPDSIFKNLVSLQSLLLSNNVISGPLPSTISHCKKLQLVDLSSNRISGLIPPGICPGAESLQELKMPDNLIIGGIPPELSLCSQLKTIDFSLNYLNGSIPAELGRLQNLEQLIAWFNSLEGKIPPELGKCRSLKDVILNNNRLSGEIPTELFSCSNLEWVSLTSNELIGEVPKEFGLLSRLAVLQLGNNSLSGQIPEELANCSTLVWLDLNSNKLTGEIPPRLGRQLGAKSLNGILSGNTLVFVRNVGNSCKGVGGLLEFAGIRPERLQQEPTLKTCDFTRLYSGPVLSLFTKYQTLEYLDLSYNELRGRIPEEFGDMVALQVLELSHNQLSGEIPASFGRLKNLGVFDASHNRLQGHIPDSFSNLSFLVQIDLSYNELTGRIPSRGQLSTLPASQYANNPGLCGVPLPECQSDDQPQTSPNVDAGKGRTKPEVGSWVNSIVLGVLISIACVCILIVWAIAMRARRKEAEEVKMLNSLQAIHAPTTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAESLIGSGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHGNLVPLLGYCKIGEERLLVYEFMEFGSLEEMLHGRAKMQDRRILTWDERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHDLEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVLLELLTGKRPTDKEDFGDTNLVGWVKMKVNDGKQMEVIDPELLSVTKASDESEAEEVKEMVRYLEITLRCVEEFPSKRPNMLQVVAMLRELMPGSSNGSSNSA 1237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7877610 7883271 - ClCG01G006820.2 Cla01g00665 264254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g00665 1237 MobiDBLite consensus disorder prediction 826 848 - -
Cla01g00665 1237 ProSitePatterns Protein kinases ATP-binding region signature. 946 969 IPR017441 GO:0005524
Cla01g00665 1237 Gene3D Transferase(Phosphotransferase) domain 1 1016 1235 - -
Cla01g00665 1237 Gene3D Ribonuclease Inhibitor 278 829 IPR032675 -
Cla01g00665 1237 SUPERFAMILY L domain-like 163 374 - -
Cla01g00665 1237 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 126 1226 - -
Cla01g00665 1237 SMART serkin_6 940 1226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla01g00665 1237 Pfam Leucine rich repeat N-terminal domain 139 177 IPR013210 -
Cla01g00665 1237 Pfam Protein kinase domain 942 1219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla01g00665 1237 ProSiteProfiles Leucine-rich repeat profile. 280 302 IPR001611 GO:0005515
Cla01g00665 1237 CDD STKc_IRAK 946 1225 - -
Cla01g00665 1237 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 126 1226 - -
Cla01g00665 1237 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1064 1076 IPR008271 GO:0004672|GO:0006468
Cla01g00665 1237 Pfam Brassinosteroid receptor island domain 651 709 IPR045381 -
Cla01g00665 1237 Gene3D Ribonuclease Inhibitor 140 252 IPR032675 -
Cla01g00665 1237 Gene3D - 654 710 - -
Cla01g00665 1237 Gene3D Phosphorylase Kinase; domain 1 901 1015 - -
Cla01g00665 1237 SUPERFAMILY Protein kinase-like (PK-like) 921 1222 IPR011009 -
Cla01g00665 1237 Pfam Leucine rich repeat 308 366 IPR001611 GO:0005515
Cla01g00665 1237 Pfam Leucine rich repeat 573 633 IPR001611 GO:0005515
Cla01g00665 1237 Pfam Leucine rich repeat 380 440 IPR001611 GO:0005515
Cla01g00665 1237 Pfam Leucine rich repeat 708 749 IPR001611 GO:0005515
Cla01g00665 1237 SUPERFAMILY RNI-like 311 640 - -
Cla01g00665 1237 ProSiteProfiles Protein kinase domain profile. 940 1226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla01g00665 1237 SUPERFAMILY L domain-like 697 825 - -
Cla01g00665 1237 SMART LRR_typ_2 353 376 IPR003591 -
Cla01g00665 1237 SMART LRR_typ_2 405 426 IPR003591 -
Cla01g00665 1237 SMART LRR_typ_2 427 451 IPR003591 -
Cla01g00665 1237 SMART LRR_typ_2 596 620 IPR003591 -
Cla01g00665 1237 SMART LRR_typ_2 378 401 IPR003591 -
Cla01g00665 1237 SMART LRR_typ_2 524 548 IPR003591 -
Cla01g00665 1237 SMART LRR_typ_2 549 572 IPR003591 -
Cla01g00665 1237 SMART LRR_typ_2 736 760 IPR003591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00665 Cla-Chr1:7877610 Cla01g01557 Cla-Chr1:30210928 0 dispersed
Cla01g00665 Cla-Chr1:7877610 Cla01g01963 Cla-Chr1:34272640 8.50E-157 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80248 PF00069 Pkinase 1.30E-43 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g00665 - - csv:101208987 2177.52