Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g00699 ATGAATGGAGATGTAGCTCCGGCCGCCGCTCCGGCGGGCTCAGCCGAGCCCCAGTACGTCAGGGCTAAGACTTCTGTATGGTGGGACATCGAGAACTGTCAGGTCCCTAAGGGCTGCGATCCTCACGCCATCGCACAAAACATCAGTTCCGCCCTCGTTAAGATCAACTATTGCGGCCCTGTTTCCATTTCCGCTTATGGAGACACTAATCGCATTCCCAATTCTATTCAGCAAGCTCTTTCCAGTACTGGCATCGCCTTGAATCATGTCCCTGCCGGTGTTAAAGATGCAAGTGACAAGAAGATTCTAGTCGATATGTTGTTTTGGGCAGTTGATAACCCTGCTCCTGCAAATTATTTGCTAATTTCCGGTGATAGGGATTTTTCTAACGCACTTCATCAATTAAGAATGAGAAGATATAATATTCTTCTTGCACAGCCACAAAAGGCTTCTGCACCACTAGTTGCAGCAGCAAAGAGTATTTGGCTTTGGATGAGTCTTGTAGCTGGAGGACCCCCAATGTCCAGTGCTGAATCATCTCAACTTGTGAATGGTATCCTTACTTCTGACCCGCAAATATCACAGGGCTCTGAATTTGATCACAATCAGCAGACAGGACAAGCTATAGTATATAAATCTGAAAATGTCTCTTTGGGAAACCAAAGATCGTATTCTACTGAGAGGATGGGCGACAACAAGCATAAAGGTAAATATATACAGAAAAGCTCCAACCAACCAGTCCTATCCAGAGCTTTAAGCTCACCTGTTTCTATGCAAGAGAAAAACCCTAATTTTTTAAACCAACCGAATCATATGCAAGCAAAGCAGTTTAAGAAAGCACCCCATGAATTCTTTGGTAATAGCAATCCTATAGCCTCTTCTAGTCAGTCTACTCCAACCCCGTTTATTGAAAATTCCAGTCATGCTAGGACTGATGGCAATGTTCCAATGGGTAGTTCCTCGAGTTACCAACCTCCTCACATGGGTCTTGCTAGGACTGATGGCAATATGTCAATGGGTAGTTCTTCAAGTTACCAACCTCCCCACATGAGGCAAAACAACATGCAGCTCCATCCTCCTTTTCGTCCAGATAATGTTTTTCCTCCTAACTCCCTTAATCATAATTCTTTTCCAGTCCCTGGTCAACCTGATCTCTCTGCACCCAATATTAGTAAGCTACATATCTCTGATTATCCCAATTATGCTATAAATCCACAAAATTTCCATCATCAAGCTGGTGAATTTAGACCACATACCAAGTCTCAAAATCCAAACTTTAATTCACCAGACAAAGGCCGTAGTCAGCATGGTGGCCATTCATTCCATCATGATGCATTGAATAAAAGACATGCTCGTGATGTAGTAGAGTATACACCTCATTCATCTTCTACCACTGTTACTAGAAGTTTATCTTATAATGATGCCTGGGGATCTCAGGGGCAACCCCCACCTTCGGAGTACATTCAAGGCCTTATTGGAGTTATTCTTCTTGCATTAAACACCCTGAAAACAGAAAAAATTATGCCAACTGAGGCAAATATAGCTGACTGCATCCGATATGGAGATTTGAGAAACAGCAATACTGATGTAAAAATGGCACTAGATAGTGCGATAGAGCATAATATGGTAGTGAAGCAGAATTTAGGAGCAGTGCAATTGTATGTTGGTAAAACAGAAAAACTGTGGAAGTGTGTGAACCCTCTAGGTGGGCATCCTAATCAATACCAAAAAGCTATATGGGATAAGATTCATAATTGTTTAGCTTCTCCAGCTGGTCGATCTGCAATAATGGCCTCTCGTTGCAGATATGAAGCAGCATTGATTCTGAAGAAAGAATGCTTAACAGATTTTGCCTTGGGCGATGTGCTTCAGATTTTGAATATGATAACCTCAATGAAGAAATGGATTACTCATCACATTTCAGGATGGCAGCCAATTAATATTATGCTAACAGAAGTTAACACAGATGCAAGTTCAAGAACTGAACTTGATTGA 1995 42.06 MNGDVAPAAAPAGSAEPQYVRAKTSVWWDIENCQVPKGCDPHAIAQNISSALVKINYCGPVSISAYGDTNRIPNSIQQALSSTGIALNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSIWLWMSLVAGGPPMSSAESSQLVNGILTSDPQISQGSEFDHNQQTGQAIVYKSENVSLGNQRSYSTERMGDNKHKGKYIQKSSNQPVLSRALSSPVSMQEKNPNFLNQPNHMQAKQFKKAPHEFFGNSNPIASSSQSTPTPFIENSSHARTDGNVPMGSSSSYQPPHMGLARTDGNMSMGSSSSYQPPHMRQNNMQLHPPFRPDNVFPPNSLNHNSFPVPGQPDLSAPNISKLHISDYPNYAINPQNFHHQAGEFRPHTKSQNPNFNSPDKGRSQHGGHSFHHDALNKRHARDVVEYTPHSSSTTVTRSLSYNDAWGSQGQPPPSEYIQGLIGVILLALNTLKTEKIMPTEANIADCIRYGDLRNSNTDVKMALDSAIEHNMVVKQNLGAVQLYVGKTEKLWKCVNPLGGHPNQYQKAIWDKIHNCLASPAGRSAIMASRCRYEAALILKKECLTDFALGDVLQILNMITSMKKWITHHISGWQPINIMLTEVNTDASSRTELD 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8209394 8213340 + ClCG01G007140.1 Cla01g00699 264288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g00699 664 MobiDBLite consensus disorder prediction 292 327 - -
Cla01g00699 664 MobiDBLite consensus disorder prediction 413 442 - -
Cla01g00699 664 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 12 646 - -
Cla01g00699 664 MobiDBLite consensus disorder prediction 292 358 - -
Cla01g00699 664 MobiDBLite consensus disorder prediction 222 247 - -
Cla01g00699 664 Pfam OST-HTH Associated domain 599 654 IPR025677 -
Cla01g00699 664 PANTHER LIMKAIN B LKAP 12 646 IPR024768 GO:0005777|GO:0010468|GO:1903231
Cla01g00699 664 Gene3D - 18 165 - -
Cla01g00699 664 MobiDBLite consensus disorder prediction 417 434 - -
Cla01g00699 664 Pfam NYN domain 23 159 IPR021139 GO:0004540
Cla01g00699 664 MobiDBLite consensus disorder prediction 335 353 - -
Cla01g00699 664 CDD PIN_limkain_b1_N_like 23 147 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00699 Cla-Chr1:8209394 Cla02g00078 Cla-Chr2:819383 5.25E-39 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g00699 - - cmo:103503825 1235.71