Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla01g00725 | ATGAATAGTTGTTCATTGTTGGCGGTGGTTTTGTGTGTGGTGGTGGCGGTGGAAGCCGCCATTGAAGCAGTGGAGCTTCCCGGTGGGGTTTTTGGGCCTGAAAGCATCGCCTTTGACTGCCGTGGAGAAGGCCCCTACGCCGGCGTCTCCGATGGCAGAATCCTCAAGTGGAAAGGTCCCGACTTGGGTTGGACTCAATTTGCTTTTACCTCACCCAACAGGGAATTAGGAAAAGATTGCGATGGACAACCCCAAACGGAGGCAGCATGTGGAAGGCCATTAGGGCTAAAATTTCACCCTTCAACTTGTGAGCTTTACATAGCAGATGCTTATTTCGGCCTTCTGGTTGTAGGACCTCAGGGCGGGTTGGCTCGCCAGCTGGCTGCTTCCGCCCAAGGCGTCCCACTCCGCTTCACTAATGCTCTCGATATCGACTCTCGTAACGGTGTTGTTTATTTCACCGATAGTAGTATCTTGTTTCAAAGAAGGGTTTGGGTGTTGTCGATAATGAACGGAGACAAGACAGGGAGGCTACTGAAATACGATCCACACACCAAAAACGTCACCGTATTGCTCAAAGGCCTCGCTTTCCCAAACGGCGTCGCTTTGAACGCCGATTCCTCCTTCCTTCTACTGGCCGAAACCGGCACTCTCCGGGGTCCCAAAACTCACAGCGTGGAGGTATTTGCACAACTCGAACGGTTTCCAGACAACATAAAAAGGACCGATAAGGGTGACTTTTGGATCGCCATGAACACCGGAAGAGGGAAGCTCGAAACTCAAACATGGAAGGGGCTCGACCAGGAAGCGACATTTCAGCATGGCGAGGTGAAGATCCCGTGGAGTCAGGCCGATCCGGTGGCGGTGAAGTTGGACGAGAGGGGGGAAGTGAAGGGGATGGTTGATGGGGGAGAGGGGCAAGCACTGGAGTCAGTGAGTGAGGTTGAAGAAAGTAAAGGAAGGCTGTGGATTGGTTCTGCTGTCAAACCATATAGCCATTCTTTTGGCAGTTGGGGCCTCAAGGAATGTTTTGAGTTAGCGCGTGAGACAGCAAGCGGCTCTAGCAATCTGTTCATTTTGTTCATCTTGTCATTTGATGAACCTGCGGTTTCTAGTTTAATGGAAATTAGGGGGAAAAATGGGTTACTGTTTTGTCTGGCTTTGCTTTGGTTATGGGCTTTTCCAAGTGAGGCTTCAACAAACAAAGATTTTAACCCTGAGGTTCAAGCTTTGATGGGGATCAAAGCTGCTTTGAAGGATCCTCATTCTGTTCTGACTTGGGATGACAATGCTGTGGATGCATGCACTTGGAATTTCATCACTTGCTCTCCCGATAAACTAGTCATTGGCATAGGAGCTCCAAGCCAAAACTTTTCTGGTACACTCTCACCAAGTATTGCAAATTTGACAAACCTCCAATTTCTGCTTCTTCAGAATAACAATATATCAGGAAAAATCCCCAATGAGATTAGCAAGATACCTAAACTTCGCACACTTGATCTTTCAAACAACTTGTTCTCTGGAGAAATTCCCAGCTCTTTCTCCAATATGAAAAGCCTTCAATACCTGAGTTTTGGGATTGGTATCAGGAGACTCAACAATAACACCTTTTCAGGGCCAATCCCAGCATCACTGGCTAACATGACCCAGCTTGCCCTGCTGGACTTGTCCTATAATAATTTGAGCAGTCCTGTGCCCAGACTGCTGGCTAAGACATTTAACTTTACCGGAAACTCTTTGATATGTTCCCCTGGAATTAAGGAAGTATGCTATGGAACAACTCCATTGCCACTTTCTTTTGTTGTTACTAATTCCACATATTCTCAACCTCCTAGGAGACACAAAGGCCAGAGAATTGCCTTAGTCATTGGTCTCAGCTTGCTCTGCATCTGTCTGTTCACTCTTGCATATGGTTTCTTTTTCTGGCGGAAGCATAGGCACAACCAGCAAATATTCTTTGAAGCTAATGATTGGCATCGGGAAGAACATAGCCTAGGGAACATAAAGAGGTTCCAGTTCAGAGAACTTCAGAATGCTACCCACAATTTCAGCAGTAAAAACTTGGTTGGAAAAGGTGGTTTTGGAAATGTATACAGAGGATATCTACAAGATGGCACCATTATAGCTGTAAAGAGACTCAAAGATGGGAATGCTGTGAGAGGAGAGATCCAATTTCAGACTGAAGTGGAAATGATAAGCTTGGCAGTGCATAGGAACCTACTCAGATTATATGGTTTCTGTATGACAGAAACTGAGAGGCTTTTGGTCTATCCATACATGTCGAATGGCAGTGTCGCTACCCGTCTTAAAGCAAAACCAGCTCTGGATTGGGGTACAAGGAAGAGAATTGCCTTGGGAGCTGCTAGGGGTTTGTTATACCTACACGAACAGTGTGATCCAAAAATAATTCACAGGGATGTGAAAGCTGCAAATATACTGCTTGATGATTTCTGTGAGGCAGTGGTGGGTGATTTTGGGCTGGCAAAGCTGTTAGATCACAGAGACTCACATGTCACTACTGCAGTGAGGGGAACTGTTGGGCACATTGCACCAGAGTATCTATCAACAGGCCAATCCTCTGAGAAAACAGATGTTTTCGGGTTTGGAATTCTACTACTTGAGCTCATATCAGGTCAAAGAGCTCTTGAATTTGGAAAAGCAGCAAACCAAAAGGGTGCAATACTGGACTGGGTAAAGAAGATACACCAAGAAAAGAAGCTTGAAATGCTTGTTGACAAAGACTTGAAAAGTAATTATGACCCGATTGAACTTGAAGAAATTGTTCGAGTCGCTCTCTTGTGCATTCAATATCTTCCAAGCCACAGGCCTAAGATGTCTGAAGTGGTCAGGATGCTAGAAGGAGATGGGCTTGCAGAGAAATGGGAAGCTTCCCAAAGGGCAGAAGCAAGCAGGAGCAGAGCCAATGAGTTCTCCTCTTCAGAACGTTACTCTGATCTTACTGATGACTCTTCATTGTTTGCTCAAGCAATAGAGCTCTCGGGACCGAGATAA | 3012 | 46.08 | MNSCSLLAVVLCVVVAVEAAIEAVELPGGVFGPESIAFDCRGEGPYAGVSDGRILKWKGPDLGWTQFAFTSPNRELGKDCDGQPQTEAACGRPLGLKFHPSTCELYIADAYFGLLVVGPQGGLARQLAASAQGVPLRFTNALDIDSRNGVVYFTDSSILFQRRVWVLSIMNGDKTGRLLKYDPHTKNVTVLLKGLAFPNGVALNADSSFLLLAETGTLRGPKTHSVEVFAQLERFPDNIKRTDKGDFWIAMNTGRGKLETQTWKGLDQEATFQHGEVKIPWSQADPVAVKLDERGEVKGMVDGGEGQALESVSEVEESKGRLWIGSAVKPYSHSFGSWGLKECFELARETASGSSNLFILFILSFDEPAVSSLMEIRGKNGLLFCLALLWLWAFPSEASTNKDFNPEVQALMGIKAALKDPHSVLTWDDNAVDACTWNFITCSPDKLVIGIGAPSQNFSGTLSPSIANLTNLQFLLLQNNNISGKIPNEISKIPKLRTLDLSNNLFSGEIPSSFSNMKSLQYLSFGIGIRRLNNNTFSGPIPASLANMTQLALLDLSYNNLSSPVPRLLAKTFNFTGNSLICSPGIKEVCYGTTPLPLSFVVTNSTYSQPPRRHKGQRIALVIGLSLLCICLFTLAYGFFFWRKHRHNQQIFFEANDWHREEHSLGNIKRFQFRELQNATHNFSSKNLVGKGGFGNVYRGYLQDGTIIAVKRLKDGNAVRGEIQFQTEVEMISLAVHRNLLRLYGFCMTETERLLVYPYMSNGSVATRLKAKPALDWGTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDFCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAANQKGAILDWVKKIHQEKKLEMLVDKDLKSNYDPIELEEIVRVALLCIQYLPSHRPKMSEVVRMLEGDGLAEKWEASQRAEASRSRANEFSSSERYSDLTDDSSLFAQAIELSGPR | 1003 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 8419245 | 8436574 | - | ClCG01G007420.2 | Cla01g00725 | 264314 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla01g00725 | 1003 | Gene3D | Phosphorylase Kinase; domain 1 | 652 | 759 | - | - | |
Cla01g00725 | 1003 | ProSitePatterns | Protein kinases ATP-binding region signature. | 689 | 711 | IPR017441 | GO:0005524 | |
Cla01g00725 | 1003 | SUPERFAMILY | Calcium-dependent phosphotriesterase | 23 | 329 | - | - | |
Cla01g00725 | 1003 | Pfam | Leucine rich repeat N-terminal domain | 405 | 443 | IPR013210 | - | |
Cla01g00725 | 1003 | MobiDBLite | consensus disorder prediction | 963 | 985 | - | - | |
Cla01g00725 | 1003 | SMART | serkin_6 | 683 | 952 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla01g00725 | 1003 | ProSiteProfiles | Protein kinase domain profile. | 683 | 962 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla01g00725 | 1003 | Pfam | Protein kinase domain | 684 | 950 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla01g00725 | 1003 | SUPERFAMILY | L domain-like | 407 | 582 | - | - | |
Cla01g00725 | 1003 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 802 | 814 | IPR008271 | GO:0004672|GO:0006468 | |
Cla01g00725 | 1003 | Pfam | Strictosidine synthase-like, N-terminal | 19 | 57 | - | - | |
Cla01g00725 | 1003 | Gene3D | Transferase(Phosphotransferase) domain 1 | 760 | 972 | - | - | |
Cla01g00725 | 1003 | Pfam | Strictosidine synthase | 140 | 219 | IPR018119 | GO:0009058|GO:0016844 | |
Cla01g00725 | 1003 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 382 | 1003 | - | - | |
Cla01g00725 | 1003 | SUPERFAMILY | Protein kinase-like (PK-like) | 662 | 953 | IPR011009 | - | |
Cla01g00725 | 1003 | Gene3D | Ribonuclease Inhibitor | 404 | 592 | IPR032675 | - | |
Cla01g00725 | 1003 | Gene3D | - | 14 | 337 | IPR011042 | - | |
Cla01g00725 | 1003 | MobiDBLite | consensus disorder prediction | 970 | 985 | - | - | |
Cla01g00725 | 1003 | PANTHER | PROTEIN NSP-INTERACTING KINASE 2-LIKE | 382 | 1003 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g00725 | Cla-Chr1:8419245 | Cla11g00478 | Cla-Chr11:5471599 | 0 | dispersed | |
Cla10g01536 | Cla-Chr10:30698246 | Cla01g00725 | Cla-Chr1:8419245 | 3.08E-66 | dispersed | |
Cla11g00130 | Cla-Chr11:1650852 | Cla01g00725 | Cla-Chr1:8419245 | 2.07E-19 | dispersed | |
Cla01g00725 | Cla-Chr1:8419245 | Cla05g02357 | Cla-Chr5:35159817 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80249 | PF00069 | Pkinase | 2.50E-43 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla01g00725 | - | - | csv:101222667 | 1128.24 |