Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g00754 ATGAGTGAGCGCCAGCGACTGGACGAAATCGACGGTGGATGGGTGATGAAAAATGGGTTCGAATCTATTGCCCCAAAGACCCACCGAATTCCAATTTCAACCCGAAATAGGCGAAGAAAGAAGAAAGGGCCAAAGAAGAGAGAAAGAACGGAAGAACATCTCAACTTCGGCTTCAAGTTCCAGAGCGAAGCCCAGATTCCATTGTTGCAACTCGCCCCAGAGTTTCCTTCTAATCTCTTCATCTCTGTAGCCCGCGACAACCCTCTTTTTCCCCTTTTCATTCTTCCATATTCGCTGATTATGCCAGACGTGCAAGCCCTTGTGAATGATTTCGTTATCAAGCTTAAGAGGCGTAAAATTGAAGGCTCCTTGGCTACAGCGAAGCATACGGCTGAATTGCTTCGTTCTGTTATTTCGCAGCAGCGAATACCCTACACGAATCAGGCGGCTGCTTTGATTGATGCTGTGAAAGCTGTTGGCGAGCAGCTGATTGCTGCGAATCCTGTTGAGCTTGCTGTGGGTAATATTGTGAGGCGGGTTTTGCACATTATCAGAGAGGAGGATCTCTCTCTCACTACAGCTTCTATTGCTGGGTTAAGCTTATCAGCAGTTAGTGATGATGAAGATGACACTGAAAAAGATGATCGCCCGGTCCTCTCAGCTGCTGCTGTTGCAGCTGCTGCAAGAAGCACTTTGCGGCCACCTTCCTTGCAAACTCTTCTTGAGGATGTTCCTAATCAAACATCGATTCATCAAACTTCATCATCTGGAGGCGATTCAGAAGGAAAAAGCAAATCTGCTGATAAAAGTTCGAGGAGTCGAAAACTCAAGCATGATGTAATTGAAGCTGTTAATGAGCTTATTCAGGATATTGCAACTTGTCATGAACAGATTGCTGAACAAGCAGTGGAGCACATTCATCAGAACGAGGTAATATTAACTTTGGGGAGTTCCAGAACAGTATTGGAATTTCTTTGTGCTGCTAAGGAGAAGAAAAGGTCCTTCCGGGTGTTTGTTACTGAGGGTGCTCCAAGATATCAGGGTCATCTTCTTGCTAAGGAGTTGGTTACAAGAGGTTTACAGACCACACTTATTACTGATTCTGCAGTTTTTGCTATGATTTCCCGGGTGAATATGGTAATAGTTGGAGCTCATGCTGTCATGGCAAATGGTGGTGTCATGGCACCAGTCGGATTGAATATGGTGGCCCTTGCAGCTAAAAGGCATGCTGTTCCTTTTGTCGTGCTAGCTGGAAGTCACAAGTTATGCCCTTTGTATCCTCACAATCCGGAAGTTCTACTCAATGAACTGAGGTCCCCATCAGAGCTACTGGACTTTGGTGAATTTTCAGATTGCATGGACTTTGGAACGAACAATGGTTCTCCTCTTCTCCATGTAGTCAACCCTACATTTGACTATGTGCCACCATCACTTGTTAGTTTATTTATTACTGACACAGGTGGCCATAACTCATCATACATGTATCGGCTTATTGCTGATTATTATTCAGCTGATGATTTGGTAATTAAAAGAAGGCCTTCTACAGGCAGCTGA 1554 44.72 MSERQRLDEIDGGWVMKNGFESIAPKTHRIPISTRNRRRKKKGPKKRERTEEHLNFGFKFQSEAQIPLLQLAPEFPSNLFISVARDNPLFPLFILPYSLIMPDVQALVNDFVIKLKRRKIEGSLATAKHTAELLRSVISQQRIPYTNQAAALIDAVKAVGEQLIAANPVELAVGNIVRRVLHIIREEDLSLTTASIAGLSLSAVSDDEDDTEKDDRPVLSAAAVAAAARSTLRPPSLQTLLEDVPNQTSIHQTSSSGGDSEGKSKSADKSSRSRKLKHDVIEAVNELIQDIATCHEQIAEQAVEHIHQNEVILTLGSSRTVLEFLCAAKEKKRSFRVFVTEGAPRYQGHLLAKELVTRGLQTTLITDSAVFAMISRVNMVIVGAHAVMANGGVMAPVGLNMVALAAKRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDFGTNNGSPLLHVVNPTFDYVPPSLVSLFITDTGGHNSSYMYRLIADYYSADDLVIKRRPSTGS 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8810310 8818870 + ClCG01G007720.2 Cla01g00754 264343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g00754 517 Gene3D - 294 501 IPR042529 -
Cla01g00754 517 MobiDBLite consensus disorder prediction 243 276 - -
Cla01g00754 517 MobiDBLite consensus disorder prediction 262 276 - -
Cla01g00754 517 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 154 509 - -
Cla01g00754 517 SUPERFAMILY NagB/RpiA/CoA transferase-like 104 506 IPR037171 -
Cla01g00754 517 MobiDBLite consensus disorder prediction 243 261 - -
Cla01g00754 517 PANTHER BNAA01G32370D PROTEIN 154 509 - -
Cla01g00754 517 Pfam Initiation factor 2 subunit family 119 216 IPR000649 GO:0044237
Cla01g00754 517 Pfam Initiation factor 2 subunit family 265 489 IPR000649 GO:0044237
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00754 Cla-Chr1:8810310 Cla09g00127 Cla-Chr9:1270848 5.51E-22 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g00754 K03754 - csv:101220366 747.658