Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla01g00803 | ATGAGTGAAACCATCGAGAATTACTTGAGAAAGAACTTCGACCTCGATTCCAAGAGTCCGTCAGAGGAGGCTCAAATGCGATGGCGATCCGCCGTTTCTATTGTCAAGAATCGCCGCCGTAGGTTTCGTATGGTTGCTGATCTCGAAAAGCGAGCTCAGGCTGAGGAAAAGCGCAGGAAACTCCAGGAAAAGATACGAGTAGCTCTATACGTACAAAAAGCAGCATTGCATTTCATTGATGGTAGGTATTCTGATTCCCTATTACAGTATCTTATATTGTTGGATATTTGTTCGCAGTTTCAAGATTATATATTAATACGCACATGCATTTTTTATCGTTATGTACCAGCCGGGAAGCGAGGTGATTACAAGCTCTCCACAGAAGTTAGGGAAGCTGGTTTTGGAGTTGAACCCGATGCATTAGCATCCATGGTTCAAACCCACAACACGAAGAGTTTGGAACATTATGGGGGCGTTGGCGGATTGGTAAGAGACCTAAACGTTTCTTTGAAAGATGGAATTGTTACAAGTGAAATACCTTCAAGGCAGAACATATACGGCATCAACCGTTATGTTGAGAAGCCTTCAAGAGGCTTTTGGATGTTTGTATGGGAAGCCCTGCATGATTTGACTCTCATCATTCTCTTGGTTTCTGCTGTGGTTTCCATTGGCGTTGGAAATGCAACTGAAGGTTGGCCTAAAGGCATGTACGATGGACTTGGAATAATAATGAGTATTTTTTTGGTCGTGATAGTAACGGCAATCAGTGACTATAATCAGTCCTTGCAATTTAAGGACCTGGAGAAGCAGAAGAAAAACATTATCATTCAAGTTACTCGAGATGGATGCAGACAGAAGGTTTCTATTTACGACTTGGTGGTTGGAGATATTGTTCATTTGTCTATTGGAGATCAAGTCCCTGCTGATGGCATTTTGGTGTCAGGCTACAACTTATCACTTGACGAATCGAGCTTATCAGGTGAAAGTGAACCCGTAAATGTAGATGACAATAGGCCTTTTCTTCTAGCAGGGACCAAAGTGCAGGATGGATCTGGAAAAATGCTAGTTGCCTCAGTTGGCATGAGAACTGAATGGGGAAGATTGATGGTCACTTTGAGTGAAGGAGGAGATGACGAAACACCACTTCAGGTAAAGCTTAATGGGGTTGCGACAATCATTGGAAAGATTGGCTTGGTATTCGCGGTGTTAACATTCATTGTTCTGATCTCAAGGTATTTTGTGTATAAAGCATTACACAATCAGATTGGGCACTGGTCCTCCAAAGATGCATCAACGCTTCTGAATTACTTTGCCATTGCAGTAATTATAATTGTTGTTGCAGTTCCAGAAGGATTGCCTCTGGCCGTGACACTAAGTCTTGCTTTTGCCATGAAAAGGTTAATGAAGGATAAGGCACTCGTGAGGCATCTCTCTGCTTGTGAGACTATGGGTTCTGCAACCTGCATTTGCACCGATAAAACAGGTACATTGACAACAAACCATATGGTCGTCGACAAAATGTGGATCTGTGAAGAAACGAGGACAATAAAAAGTTCCCACGACGAAACTGCTTTGAAAAATTCTGTAAATGAAACGGTATACAATCTCCTTATACAATCTATATTTCAAAATACCAGCTCAGAGGTGGTGAAAGGCAAAGACGGGAGAAACACCATTTTAGGCACTCCAACTGAGACTGCATTGCTAGAATTTGGCTTGCTTTTGGGTGGTACTTTTGGTACATTGAATGATGAGTATAAGATCGTCAAAGTGGAGCCATTCAATTCAAATAGAAAGAAAATGTCTGTTCTTGTGGCTCTTCCCGGTGGTGGCTTTCGCGCATTTTGCAAGGGAGCATCAGAAATCATTTTAGCTATGTGTGACAAGGTTCTCAGTTCTAATGGAGAAGCGTTGCCTCTTTCAGACGAACAAAGAACAAACATCTCTAATATCATTAATAGCTTTGCCAACGATGCGCTTAGAACTCTATGCTTCGCCTACAAGGATATAGAAGCTCTTTCAGCACCAGAGAAAATTCCAGATGATGATTTTACTTTAATAGCTGTTGTTGGCATTAAAGATCCTGTACGTCCGGGTGTAAAGGAGGCAGTTCAGGCTTGTTTGGCTGCTGGAATTACTGTAAGGATGGTAACTGGGGATAACATCAATACGGCTAAAGCCATAGCCAAAGAGTGTGGCATTTTGACAGAAGGTGGTTTAGCAATAGAAGGGCCAGAGTTCCGCAACAAGAGCCAAGATGAAATGGAGAAGTTAATACCAAAACTCCAGGTGATGGCTCGATCTTCTCCTCTTGACAAGCATACGTTGGTAGGACAGTTAAGGAAAACGTTCAAAGAAGTGGTGGCTGTCACAGGTGATGGGACTAATGATGCCCCTGCTTTGCATGAGGCAGACATTGGATTAGCCATGGGTATTGCGGGAACAGAGGTTGCAAAAGAAAATGCGGACGTAGTCATAATGGATGATAACTTCACAACTATTGTTAATGTTGCAAGATGGGGACGTGCAGTCTACATCAACATTCAGAAGTTCGTTCAGTTCCAGCTTACAGTCAACGTAGTCGCTCTCATGCTCAATTTTATATCTGCATGCGTTTCAGGGTCTGCTCCTCTGACGGCTGTTCAAATGCTATGGGTGAACTTGATAATGGACACGCTGGGAGCTCTAGCTTTGGCCACAGAGCCTCCCAACGAGGGGCTGATGCAAAGAAAACCAATTGGTAGAAACGTCAATATCATCACTGGGATTATGTGGAGAAACATCATCGGTCAGAGCATCTATCAAATCACAGTCTTACTAATCCTCAGATTCGAAGGAAAACGCCTGCTCAATCTCACTGGTCCTGATTCAAGCATCCTTCTCGATACATTCATTTTCAACTCCTTCGTATTCAATGAAATAAACAGCCGTGACATGGAGAAGATAAACGTGTTCAAAGGGATATTTGGGAGTTGGGTATTCATTGGAGTGATGGCATCGACAGTAGGATTCCAGATCATAATAGTGGAATTTCTTGGGACATTCGCAGAAACAGTAGGATTAAGCTGGAGATTATGGGTAATCAGCATTATAATTGGAGCTGTGAGTTTGTCAATAGCAATGGGGCTGAAATGCATTCCTGTTTCAAACTCTAAAACCGCATGCCACTTCCACGATGGTTATGAGCCACTCCCCACTGGTCCTGACTTGGCTTGA | 3216 | 42.82 | MSETIENYLRKNFDLDSKSPSEEAQMRWRSAVSIVKNRRRRFRMVADLEKRAQAEEKRRKLQEKIRVALYVQKAALHFIDGRYSDSLLQYLILLDICSQFQDYILIRTCIFYRYVPAGKRGDYKLSTEVREAGFGVEPDALASMVQTHNTKSLEHYGGVGGLVRDLNVSLKDGIVTSEIPSRQNIYGINRYVEKPSRGFWMFVWEALHDLTLIILLVSAVVSIGVGNATEGWPKGMYDGLGIIMSIFLVVIVTAISDYNQSLQFKDLEKQKKNIIIQVTRDGCRQKVSIYDLVVGDIVHLSIGDQVPADGILVSGYNLSLDESSLSGESEPVNVDDNRPFLLAGTKVQDGSGKMLVASVGMRTEWGRLMVTLSEGGDDETPLQVKLNGVATIIGKIGLVFAVLTFIVLISRYFVYKALHNQIGHWSSKDASTLLNYFAIAVIIIVVAVPEGLPLAVTLSLAFAMKRLMKDKALVRHLSACETMGSATCICTDKTGTLTTNHMVVDKMWICEETRTIKSSHDETALKNSVNETVYNLLIQSIFQNTSSEVVKGKDGRNTILGTPTETALLEFGLLLGGTFGTLNDEYKIVKVEPFNSNRKKMSVLVALPGGGFRAFCKGASEIILAMCDKVLSSNGEALPLSDEQRTNISNIINSFANDALRTLCFAYKDIEALSAPEKIPDDDFTLIAVVGIKDPVRPGVKEAVQACLAAGITVRMVTGDNINTAKAIAKECGILTEGGLAIEGPEFRNKSQDEMEKLIPKLQVMARSSPLDKHTLVGQLRKTFKEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVVIMDDNFTTIVNVARWGRAVYINIQKFVQFQLTVNVVALMLNFISACVSGSAPLTAVQMLWVNLIMDTLGALALATEPPNEGLMQRKPIGRNVNIITGIMWRNIIGQSIYQITVLLILRFEGKRLLNLTGPDSSILLDTFIFNSFVFNEINSRDMEKINVFKGIFGSWVFIGVMASTVGFQIIIVEFLGTFAETVGLSWRLWVISIIIGAVSLSIAMGLKCIPVSNSKTACHFHDGYEPLPTGPDLA | 1071 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 9377849 | 9385392 | - | ClCG01G008160.2 | Cla01g00803 | 264392 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla01g00803 | 1071 | TIGRFAM | ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type | 146 | 1048 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
Cla01g00803 | 1071 | PANTHER | CATION TRANSPORTING ATPASE | 112 | 1055 | - | - | |
Cla01g00803 | 1071 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 154 | 1049 | IPR023298 | - | |
Cla01g00803 | 1071 | Gene3D | - | 205 | 1045 | - | - | |
Cla01g00803 | 1071 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 761 | 879 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla01g00803 | 1071 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 587 | 736 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla01g00803 | 1071 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 242 | 554 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla01g00803 | 1071 | Pfam | haloacid dehalogenase-like hydrolase | 488 | 805 | - | - | |
Cla01g00803 | 1071 | Pfam | Cation transporter/ATPase, N-terminus | 154 | 222 | IPR004014 | - | |
Cla01g00803 | 1071 | Pfam | E1-E2 ATPase | 276 | 469 | - | - | |
Cla01g00803 | 1071 | Pfam | Cation transporting ATPase, C-terminus | 876 | 1044 | IPR006068 | - | |
Cla01g00803 | 1071 | Gene3D | - | 500 | 695 | IPR023299 | GO:0000166 | |
Cla01g00803 | 1071 | SFLD | p-type atpase | 472 | 843 | IPR044492 | - | |
Cla01g00803 | 1071 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 112 | 1055 | - | - | |
Cla01g00803 | 1071 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 7 | 84 | - | - | |
Cla01g00803 | 1071 | Gene3D | - | 487 | 836 | IPR023214 | - | |
Cla01g00803 | 1071 | Gene3D | - | 173 | 373 | - | - | |
Cla01g00803 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 688 | 699 | - | - | |
Cla01g00803 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 490 | 504 | - | - | |
Cla01g00803 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 815 | 827 | - | - | |
Cla01g00803 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 710 | 720 | - | - | |
Cla01g00803 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 791 | 810 | - | - | |
Cla01g00803 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 321 | 335 | - | - | |
Cla01g00803 | 1071 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 492 | 498 | IPR018303 | - | |
Cla01g00803 | 1071 | SUPERFAMILY | Calcium ATPase, transduction domain A | 275 | 369 | IPR008250 | - | |
Cla01g00803 | 1071 | SFLD | C1.7: P-type atpase like | 472 | 843 | - | - | |
Cla01g00803 | 1071 | SUPERFAMILY | HAD-like | 489 | 896 | IPR036412 | - | |
Cla01g00803 | 1071 | CDD | P-type_ATPase_Ca_PMCA-like | 182 | 924 | - | - | |
Cla01g00803 | 1071 | SMART | Cation_ATPase_N_a_2 | 153 | 227 | IPR004014 | - | |
Cla01g00803 | 1071 | Gene3D | - | 20 | 80 | - | - | |
Cla01g00803 | 1071 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 496 | 700 | IPR023299 | GO:0000166 | |
Cla01g00803 | 1071 | Coils | Coil | 44 | 65 | - | - | |
Cla01g00803 | 1071 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 10 | 52 | IPR024750 | GO:0005516 | |
Cla01g00803 | 1071 | PRINTS | H+-transporting ATPase (proton pump) signature | 823 | 848 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla01g00803 | 1071 | PRINTS | H+-transporting ATPase (proton pump) signature | 648 | 666 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla01g00803 | 1071 | PRINTS | H+-transporting ATPase (proton pump) signature | 791 | 807 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla01g00803 | 1071 | PANTHER | CATION TRANSPORTING ATPASE | 7 | 84 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g00803 | Cla-Chr1:9377849 | Cla05g02106 | Cla-Chr5:32672272 | 0 | dispersed | |
Cla09g00071 | Cla-Chr9:677972 | Cla01g00803 | Cla-Chr1:9377849 | 5.07E-14 | dispersed | |
Cla01g00803 | Cla-Chr1:9377849 | Cla10g01496 | Cla-Chr10:30188099 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla01g00803 | K01537 | - | csv:101203529 | 1865.51 |