Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla01g00812 | ATGATGCCCATTTTGGACCACCACCATGATCACAATAATCAACCCCTCCTCCTCCCCGCCGATGATCTCGCCGCCGCTGTCCCCGCCCCCGCCTTCCATCGCAAGAAACGGATGCCCAGAAACCGCCGCCGCTCTTCTTCTAATCTTCCCTTCTTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAATAACACTCCCCATCTCCCTCCTCCCCGGGTAATTGATCCAAGGAACCTGAAGTTTCTTTTCCAGAAGGAGCTTAAGAACAGTGATGTTAGCTCTCTGAGGAGAATGATACTCCCAAAGAAAGCAGCTGAAACTCACCTTCCAGCTTTGGAGTCTAAAGAAGGAATTATAATCACCATGGATGACTTGGATGGGGTGCATGTTTGGAACTTCAAATATAGGTTTTGGCCAAATAACAATAGTAGAATGTATGTACTTGAAAATACTGTTATCACAGGAGACTTTGTCAATGCCCATGGCTTACATCTAGGAGATTTCATCATGGTTTACCAAGATTGTGAAGAACATAACTATGTGATTCAAGCAAAAAAGGCTTGCGAGCAAGAAATATATTCCGACATAGCAACCAACGTCATGATCAACGACGACATTGTGTTTCAAGACTACGATGCTAGCAAAGCGGCCAGCTCCATATACGTGCCTAGTCCAACCATGGAAGATCCTGTGTCATCATTCATCTATGACACTAGTTCTGCCTTCGACAACGATTCGCCTTTCGACTTTATGAGTGGATCAATGACCAACTACTCAAAAATGGGAGGCCTCGAAGGCTTTGGATCGGTCGAGAACTTGTCTCTCGACGACTTCTACTAA | 840 | 45.12 | MMPILDHHHDHNNQPLLLPADDLAAAVPAPAFHRKKRMPRNRRRSSSNLPFFPSSSSSSSSSNNTPHLPPPRVIDPRNLKFLFQKELKNSDVSSLRRMILPKKAAETHLPALESKEGIIITMDDLDGVHVWNFKYRFWPNNNSRMYVLENTVITGDFVNAHGLHLGDFIMVYQDCEEHNYVIQAKKACEQEIYSDIATNVMINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSKMGGLEGFGSVENLSLDDFY | 279 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 9566809 | 9570531 | - | ClCG01G008250.2 | Cla01g00812 | 264401 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla01g00812 | 279 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR FUS3 | 32 | 279 | - | - | |
Cla01g00812 | 279 | SMART | B3_2 | 83 | 188 | IPR003340 | GO:0003677 | |
Cla01g00812 | 279 | Pfam | B3 DNA binding domain | 83 | 183 | IPR003340 | GO:0003677 | |
Cla01g00812 | 279 | SUPERFAMILY | DNA-binding pseudobarrel domain | 81 | 187 | IPR015300 | - | |
Cla01g00812 | 279 | MobiDBLite | consensus disorder prediction | 31 | 73 | - | - | |
Cla01g00812 | 279 | MobiDBLite | consensus disorder prediction | 44 | 68 | - | - | |
Cla01g00812 | 279 | ProSiteProfiles | B3 DNA-binding domain profile. | 83 | 188 | IPR003340 | GO:0003677 | |
Cla01g00812 | 279 | Gene3D | - | 79 | 199 | IPR015300 | - | |
Cla01g00812 | 279 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 32 | 279 | IPR044800 | GO:0003700 | |
Cla01g00812 | 279 | CDD | B3_DNA | 81 | 186 | IPR003340 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g00812 | Cla-Chr1:9566809 | Cla09g00858 | Cla-Chr9:8807601 | 8.25E-38 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
60392 | PF02362 | B3 | 8.10E-16 | CL0405 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla01g00812 | - | - | csv:101222512 | 403.675 |