Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla01g00840 | ATGTCAAAAGAGGAGGTTATTATTTTGGACTGTTTGATCAGCCCATTTTGCAATAGGGTTAAGATTGCTTTGAATGAGAAGGGAGTGAGTTATGAGAGTAGGGAAGAGGATTTGTTTGGTTTGAAAGGTGGGAAAAGTGAGTTGTTGCTCAAATCAAACCCTATTTATAAGAAAGTGCCTGTTCTCTTGCATAATGGCAAGCCACTGAATGAAAGTTCTATTATTGTCAATTATATTGATGAGACTTGGGCATCTTCTTCCCCACTTCTTCCTTTTTCGCCCTACGAAAGAGCTCAAGCTCGGTTCTGGATTGACTACATCGATAAAAAGGTATTTGATGTGGGTTCCAAGATTTGGAAGAGCAATGGAGAAGAGCAAGAGGCAGCCAAGAAAGAGTTGATAGAGATTTTGAAGCAATTGGAGGAAGCTTTAGGTGACAAAGATTTCTTTGGAGGTGAAAGGTTTGGGATTGTGGATGTGATTGCAATCCCATTCACAAGTTGGTTCAATGCTTATGAGAAAGTTGGGAACTTCAAAGTGGAAGAACATTGCCCTAAAATCTCAGCTTGGGAAAAGAGATGTTTGCAAAAGGAGACTGTTGCAAGTGTTATCCCTTGCCCTGAGAAGATCTATAACTTTCTCACCTCCATGAGAAACAACCTTGGCCTTGAATAG | 675 | 40.3 | MSKEEVIILDCLISPFCNRVKIALNEKGVSYESREEDLFGLKGGKSELLLKSNPIYKKVPVLLHNGKPLNESSIIVNYIDETWASSSPLLPFSPYERAQARFWIDYIDKKVFDVGSKIWKSNGEEQEAAKKELIEILKQLEEALGDKDFFGGERFGIVDVIAIPFTSWFNAYEKVGNFKVEEHCPKISAWEKRCLQKETVASVIPCPEKIYNFLTSMRNNLGLE | 224 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 10176907 | 10178337 | - | ClCG01G008550.1 | Cla01g00840 | 264429 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla01g00840 | 224 | CDD | GST_C_Tau | 94 | 217 | IPR045074 | GO:0004364|GO:0006749 | |
Cla01g00840 | 224 | Gene3D | Glutaredoxin | 2 | 92 | - | - | |
Cla01g00840 | 224 | SFLD | Main (cytGST) | 2 | 221 | - | - | |
Cla01g00840 | 224 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 93 | 213 | IPR010987 | - | |
Cla01g00840 | 224 | Pfam | Glutathione S-transferase, N-terminal domain | 12 | 82 | IPR004045 | - | |
Cla01g00840 | 224 | Pfam | Glutathione S-transferase, C-terminal domain | 122 | 197 | IPR004046 | - | |
Cla01g00840 | 224 | SFLD | Main.3: Omega- and Tau-like | 2 | 221 | IPR045073 | - | |
Cla01g00840 | 224 | Coils | Coil | 123 | 146 | - | - | |
Cla01g00840 | 224 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 6 | 216 | IPR045073 | - | |
Cla01g00840 | 224 | SUPERFAMILY | GST C-terminal domain-like | 81 | 220 | IPR036282 | - | |
Cla01g00840 | 224 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 4 | 87 | IPR004045 | - | |
Cla01g00840 | 224 | Gene3D | - | 93 | 224 | - | - | |
Cla01g00840 | 224 | PANTHER | GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN | 6 | 216 | - | - | |
Cla01g00840 | 224 | SUPERFAMILY | Thioredoxin-like | 12 | 111 | IPR036249 | - | |
Cla01g00840 | 224 | CDD | GST_N_Tau | 6 | 83 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g00840 | Cla-Chr1:10176907 | Cla07g01007 | Cla-Chr7:26425770 | 9.38E-94 | dispersed | |
Cla01g00840 | Cla-Chr1:10176907 | Cla05g02445 | Cla-Chr5:35895016 | 3.81E-38 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla01g00840 | K00799 | - | csv:101213628 | 408.297 |