Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g00853 ATGGAGAACAACCAACCTGAGAATCAACATCCTCTTCACAAAACCACTAGCTTCAACGATGCCCCCAAATTGGATGCTGTTGCTGATGATGCCAATCTCGCCCCTCCTCTCCCTCCTCTTCTACAAACTGATGCTGCTCTAAAATCTTTGGAGGATCAGGATCAGAATAATCAGAATCAGCATCAGGATCAACCTCAGGATCAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGGAGGAGGAGAAGAAGGAAGTGGAGGAGGAAGAGAACACCAAGGAAGGGGAGGAAAATACTGAGGTTGAACAATCCGACAACGAACCGGATCTTCATTACAATCTCCATACCATTCTTGAAGATGTCGATCAATTTCTCTCAACTCCTCACGGTTCTCGTGATCGAGAGGAAGATTCTGTTGTTCAAATTCCTCAGTTCATCGACAAATTCTTGGATCTCGTCGATGCCAAGATTGAGCAATACAATAACGACGAATCGAATGCGAAGGAGAAAGAGTGTAGAGTACCGGAGGATGAGTCCACGTTTCTCGAAGCCGTCGATCGGATATCCAAGCTGAAAACTGCAATTCACGAAATGAAATTGGAAGAGGATAAGAATTCGTTGATCAATCGCATCGGGAGCACTCAACAGCGAGCGATTTCTTATTTGGAAGAAGATTTCAGATTCTTTCTCGAGGAATCTAGAAACAGCGATTCCGATCCTGCTGCCGATACGAAAGGGAAACAGGAACAGGATCGTTCTGCATTACCGGACAATGAATCCGATCAGTTCCAGTTTCCAGGTTACTCCGACGAGATCGTGAACTATTTGAACAAAATCGCTAAGCAAATGATTTCCGGTGGATACGAATCGGAATGCTGCCAAGCCTACATGGTTGCGAGAAGAAACATATTCGAAGACGCCTTGCTGAAGCTCGGATTCGAGAAACACAGCATCGATGATATCCAGAAGATGAGTTGGGAATCAATGGAGAGGGAGATCGCGACATGGATTAGAACCATCAAGCAATGCGCCAGCATTTTATTCTCCGGCGAACGGAATCTCGTCGAATCTGTATTTTCATCGTATCCTCCAATGTCTGCCAGTCTGTTTAGCAATCTAACTCGCGGCATTATGATTCAACTCCTAAATTTCTCAGAAGGTGTAGCAATGACGAAACGCTCCGCCGAGAAATTGTTCAAGCTTCTTGATATGTACGAAGCTCTTCGTGACATGGTCCCAAAAATGGAAGTATTATTTCCAGAAGAATCCGCTAACGAGCTCAAAACAGAAACCACAACCGCTCGAACTCGTCTAGGCGAAGCGGCGATTTGCATATTTTGCGATCTCGAGAACTCAATCAAAGCAGACACCGGAAAAACTCCGGTACCAGGCGGCGCCGTTCATCCATTAACTCGATACACCATAAACTACTTGAAATACGCTTGCGAGTACAGAAACACACTGGAACAGATTTTCAAAGAGCATTCAAAGATCGAACGAGCCGATTCAACAAGTCGACCACATTTCGAAGGCGAACAAGCACCACAATACAACTCTAGCATTGACAATCAATCCCCATTCGCGGTTGAACTGACGCGAGTAATGGAGCTCCTGGACTCAAATCTGGAAGCAAAATCAAAGCTATACAGAGATATAGCACTGAGTTCGATTTTCATGATGAACAACGGACGATACATCTTGCAGAAGATCAAAGGATCTGCAGATATCCATGAACTAGTAGGCGATACGTGGTACAGGAAGAGATCTTCGGATTTGCGTCAGTATCACAAGAATTACCAGAGAGAAACGTGGGGGAAGTTGTTAGGTTGTTTGAACCACGAAGGATTAACAGTGCACGGGAAAGTGGTAAAGCCAGTGCTGAAGGAGAGGTTTAAAGGATTCAACGCGCTGTTCGAAGAGATTCATAAAACACAGAGCTCGTGGATCATAAGCGACGAGCAACTTCAATCGGAGCTGCGAGTATCGATATCGGCGGTGATGATTCCGGCGTACAGATCATTCTTAGGGAGGTTTTCGCAGGTTTTGGATCCGGGGAGACAAACAGAGAAATATATAAAGTTTCAGCCTGAAGATATAGAGACATACATAGATGATCTATTTGATGGAAATCCAAGCTCCATGGCAAGAAGGAGAACATAA 2175 44.97 MENNQPENQHPLHKTTSFNDAPKLDAVADDANLAPPLPPLLQTDAALKSLEDQDQNNQNQHQDQPQDQEEKEKEKEKEKEKEKEEEEKKEVEEEENTKEGEENTEVEQSDNEPDLHYNLHTILEDVDQFLSTPHGSRDREEDSVVQIPQFIDKFLDLVDAKIEQYNNDESNAKEKECRVPEDESTFLEAVDRISKLKTAIHEMKLEEDKNSLINRIGSTQQRAISYLEEDFRFFLEESRNSDSDPAADTKGKQEQDRSALPDNESDQFQFPGYSDEIVNYLNKIAKQMISGGYESECCQAYMVARRNIFEDALLKLGFEKHSIDDIQKMSWESMEREIATWIRTIKQCASILFSGERNLVESVFSSYPPMSASLFSNLTRGIMIQLLNFSEGVAMTKRSAEKLFKLLDMYEALRDMVPKMEVLFPEESANELKTETTTARTRLGEAAICIFCDLENSIKADTGKTPVPGGAVHPLTRYTINYLKYACEYRNTLEQIFKEHSKIERADSTSRPHFEGEQAPQYNSSIDNQSPFAVELTRVMELLDSNLEAKSKLYRDIALSSIFMMNNGRYILQKIKGSADIHELVGDTWYRKRSSDLRQYHKNYQRETWGKLLGCLNHEGLTVHGKVVKPVLKERFKGFNALFEEIHKTQSSWIISDEQLQSELRVSISAVMIPAYRSFLGRFSQVLDPGRQTEKYIKFQPEDIETYIDDLFDGNPSSMARRRT 724
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10433236 10435410 - ClCG01G008690.1 Cla01g00853 264442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g00853 724 Coils Coil 66 104 - -
Cla01g00853 724 MobiDBLite consensus disorder prediction 1 16 - -
Cla01g00853 724 MobiDBLite consensus disorder prediction 87 108 - -
Cla01g00853 724 SUPERFAMILY Cullin repeat-like 181 713 IPR016159 -
Cla01g00853 724 MobiDBLite consensus disorder prediction 238 269 - -
Cla01g00853 724 Pfam Exo70 exocyst complex subunit 340 710 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cla01g00853 724 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 109 723 - -
Cla01g00853 724 Coils Coil 155 175 - -
Cla01g00853 724 PANTHER EXOCYST COMPLEX PROTEIN EXO70 109 723 IPR004140 GO:0000145|GO:0006887
Cla01g00853 724 Gene3D Exocyst complex component Exo70 161 722 - -
Cla01g00853 724 MobiDBLite consensus disorder prediction 1 120 - -
Cla01g00853 724 MobiDBLite consensus disorder prediction 48 63 - -
Cla01g00853 724 MobiDBLite consensus disorder prediction 238 261 - -
Cla01g00853 724 MobiDBLite consensus disorder prediction 64 86 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00853 Cla-Chr1:10433236 Cla07g01455 Cla-Chr7:31816529 0 dispersed
Cla01g00853 Cla-Chr1:10433236 Cla07g01376 Cla-Chr7:30912560 3.63E-115 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g00853 K07195 - csv:101206040 1165.6