Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g00903 ATGGCATCCTTCACTAACCTCATCTCAATCTTCTTCTTTCTCATCTGTTTTCTCACAACCCAAGCCGTTTCACAATCTAATGAATGTGAAACCACACCCAATTCATGCACTAATAAAGACCAAGCTCTACGTCTTAAAATCATTGCCATCTTCTCGATCCTCATTGCGAGCGTGATCGGTGTTGGCTCACCACTCGTCACCCGATCGATCCCGATGTTGCACCCTGATAGAAACATGTTTATCATCCTCAAAGCCTTCGCAGCGGGCATCATTCTCGCCACCGGTTTCATGCATGTTTTGCCTGATTCTTTCGACATGCTTTGGTCGAATTGTCTCAAGGAAAATCCATGGCATAAGTTTCCCTTTTCAGGTTTCGTCGCCATGATGTCAGCCATAGTCACCCTTATGGTGGATTCTATGGCTACTAGTTTGTATACCAAGAAACATACTGAAGTTATGCCTGAGAATTCTCCGAGAGGAGGAGATGATCATGAGTTGCCAGTGGCCAGTGGCGGCCATTTCCATGGCCACCATCATAGAGACACCAAGGAAACTAAGGCTGGTTCTCAACTCTTGCGGTATCGTGTTGTTGCCATGGTTTTGGAATTGGGAATTGTGGTCCATTCAGTTGTGATTGGACTTTCACTAGGAGCAACAAATGACACTTGCACAATCAAAGGTTTAGTGGCTGCTCTTTGTTTTCATCAAATGTTTGAAGGGATGGGTCTTGGTGGCTGTATTCTTCAGGCAGAATACAAGTGGATGAAGAAAGCAATAATGGTATTCTTTTTCTCAGTGACAACCCCATTTGGAATAGCCCTTGGAATAGGGTTATCAAAGACATACAAAGAAAACAGCCCTAGTGCACTCATCACTGTGGGGTTGTTGAATGCTTCTTCAGCTGGCCTTCTCATTTACATGGCTTTGGTTGATCTTCTTTCTGCTGACTTTATGGGTCCAAAGTTGCAAGGCAGCATCAAACTCCAAGTCAAATCCTATATTGCTGTGCTCTTAGGAGCTGGTGCCATGTCTTTAATGGCTAAGTGGGCTTGA 1053 44.44 MASFTNLISIFFFLICFLTTQAVSQSNECETTPNSCTNKDQALRLKIIAIFSILIASVIGVGSPLVTRSIPMLHPDRNMFIILKAFAAGIILATGFMHVLPDSFDMLWSNCLKENPWHKFPFSGFVAMMSAIVTLMVDSMATSLYTKKHTEVMPENSPRGGDDHELPVASGGHFHGHHHRDTKETKAGSQLLRYRVVAMVLELGIVVHSVVIGLSLGATNDTCTIKGLVAALCFHQMFEGMGLGGCILQAEYKWMKKAIMVFFFSVTTPFGIALGIGLSKTYKENSPSALITVGLLNASSAGLLIYMALVDLLSADFMGPKLQGSIKLQVKSYIAVLLGAGAMSLMAKWA 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11659634 11662203 - ClCG01G009160.1 Cla01g00903 264492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g00903 350 PANTHER ZINC/IRON TRANSPORTER 11 350 - -
Cla01g00903 350 Pfam ZIP Zinc transporter 44 347 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cla01g00903 350 PANTHER ZINC TRANSPORTER 10-RELATED 11 350 - -
Cla01g00903 350 TIGRFAM zip: ZIP zinc/iron transport family 34 350 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00903 Cla-Chr1:11659634 Cla01g02260 Cla-Chr1:36529016 1.24E-140 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g00903 K14709 - csv:101221552 657.907