Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g00913 ATGGGATCTGGGTGGTCGGAAGAGCAGGCTGCACAGCCGCCGCAGCAGCCAGCTACGGTTGGCGCAGCCATAAGAAACAACGAGCATAGCAGCGGCAACTCGAGTAATAATAATTTAAAGGAAGAAAAAGAGAAGGTGGTGAAAGGGAAATTAGGAGAAGAAGTGAAGCTTGGCCATGGGTTTGAAGCTATTTTGAAAGATGCAGATTTGCCAGTGGATAGGTCTTCCTTGGATAAGCTCTATGATCAACTCTATGCGGGGATCTTCTTGAACAAACGAACTAAGGCAAGTGTAACACTAGAAATGATATTTACTTTTACAAATAAGAAGTTGAACAGTAACTGTTTCATGTTATTTCCAAGAGCTCTCTCAATAACTTGGGCTGAAGAGAACAAGTACTGGAGATGGAAATCCATGGAAGAGTCTAGTGATACAATTGAAATCGTCGAGCTTTTGAACGTATGTTGGCTTGAAATCCATGGAAAGATGAAGACATGTGAGCTCTCACCCCGAATACGATATGAAGCCGCATTTGAGGTAATGATCAAAGAGGCAGCCTACGGATGGGATGTTCCAGTCAACATTAGACTTAAAAGGCCAGATGGGAGCAAGCAAGAGCATAAAGAAAACTTAGAGCAGAGGCCTCGAGGGCGGTGGGTCGAGATTCCGATAGGTGATTTCGTTGTTCATGATCATGAGGGCGGTGGTGAGATCGAGTTCAGCATGTATGAACATGAAGGAGGGATGTGGAAGAGAGGGATGCTCCTAAAAGGTCTTGTGATTCGATCAAAGGGGTCCATTTGA 804 44.65 MGSGWSEEQAAQPPQQPATVGAAIRNNEHSSGNSSNNNLKEEKEKVVKGKLGEEVKLGHGFEAILKDADLPVDRSSLDKLYDQLYAGIFLNKRTKASVTLEMIFTFTNKKLNSNCFMLFPRALSITWAEENKYWRWKSMEESSDTIEIVELLNVCWLEIHGKMKTCELSPRIRYEAAFEVMIKEAAYGWDVPVNIRLKRPDGSKQEHKENLEQRPRGRWVEIPIGDFVVHDHEGGGEIEFSMYEHEGGMWKRGMLLKGLVIRSKGSI 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12206269 12211812 - ClCG01G009230.1 Cla01g00913 264502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g00913 267 PANTHER PROTEIN PHLOEM PROTEIN 2-LIKE A2 55 262 - -
Cla01g00913 267 Pfam Phloem protein 2 114 262 IPR025886 -
Cla01g00913 267 MobiDBLite consensus disorder prediction 1 37 - -
Cla01g00913 267 MobiDBLite consensus disorder prediction 1 45 - -
Cla01g00913 267 PANTHER - 55 262 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00913 Cla-Chr1:12206269 Cla01g00933 Cla-Chr1:13028275 2.31E-48 dispersed
Cla01g00913 Cla-Chr1:12206269 Cla01g00915 Cla-Chr1:12308249 2.85E-08 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g00913 - - bhj:120083437 399.823