Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla01g00922 | ATGCCTTACGATCCTCACTTTCGGGCTGATGTTCCCGTAAATGTTAACGACAACAAATTCACAATTTATCCAAGAGCTCTAAACATTACATGGGGTAATGATAAGCGATATTGGAACTTACCTCGTCGAGACCCGAAGAAGGAAGAGGGTTTTGCAGAGCTGAAACAAGTATGCTGGTTGGAAGTAACTGGCTCAACTGAGAAAGAAGTTGTGCCTGGAAAAGAGTACAAAGTGGGGTTTGTGGTATCACTAAGGCCAGATGCTTTTGGATGGGATGATTGTAGCGTTTACATAATGGCTAAGATTGGGAAAAAGGGGAGTTTCTCTTTCAAGAAAATCAGTCTTGCAGGCAAACCTACAGATCTCACAAAATTTACCATTCCTAATGATGATGATAAGTTGACCATCAAAGTCGGTAATCCCAAAGAACCCAAACCGTCTGAAAATGATGATCTAAACCTCTATTTTGGTCTCTATGAGGTTTGGACCAATAGATGGAAGGGAGGGTTGAGAATCCATCATGCATTTGTTGAAGGTGTTCACTCCACCGATAAAAGCACTCAATCAAAGTAA | 573 | 41.19 | MPYDPHFRADVPVNVNDNKFTIYPRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSVYIMAKIGKKGSFSFKKISLAGKPTDLTKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVEGVHSTDKSTQSK | 190 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 12760513 | 12763426 | + | ClCG01G009280.1 | Cla01g00922 | 264511 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla01g00922 | 190 | PANTHER | - | 16 | 177 | - | - | |
| Cla01g00922 | 190 | Pfam | Phloem protein 2 | 19 | 174 | IPR025886 | - | |
| Cla01g00922 | 190 | PANTHER | PROTEIN PHLOEM PROTEIN 2-LIKE A9 | 16 | 177 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla01g00916 | Cla-Chr1:12360817 | Cla01g00922 | Cla-Chr1:12760513 | 2.57E-56 | dispersed | |
| Cla01g00922 | Cla-Chr1:12760513 | Cla01g02519 | Cla-Chr1:38873551 | 3.92E-38 | dispersed | |
| Cla01g00922 | Cla-Chr1:12760513 | Cla01g00923 | Cla-Chr1:12771876 | 1.39E-47 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla01g00922 | - | - | cmo:103498275 | 231.106 |