Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g00923 ATGACGAGCTTTACAAATCCAATAATGACAACCACCTGCCCTCACAGAGAAGCAGATGAAACTGCCATTGAAAAGGATACCATCAAGGGAATCACCAAAATTTATCCAAGAGGATTTAACATCACATGGGGCAATGATGATCGCTATTGGAGTATCACCAACCCAAATGTGCCAGGAAGTTTGTACATTGCAGAGCTGAAGCAAGTTTCATGGCTTGAAGTGACATGTTCAACTGATAATGTACAAATTGGTAATAAGTATAGAGTGGGTTTCAATATAACAATGAGACCAGATGCATTTGGGTGGGATGAGATTGATGTTTATGTAATGGCTAAGGTTGGGAAGAAAGGGAAGTTCATGTCCATGAAAGTTTCTCTTGGAGACATAAAACCAAATCTTAAACCTATCACCATCCCCAAGGAGCCCTTAGTAATCCCAGTTGATCCTTTAACACCCAAAGAGTTCAAGACCATCCATCTCGGTTTGTATGAAGTTTGGAGTTCAAAGTGGAAGGGAGGATTGCAGATCCATGATGCATTCGTTCAGAAGGTTGCCTAA 558 40.86 MTSFTNPIMTTTCPHREADETAIEKDTIKGITKIYPRGFNITWGNDDRYWSITNPNVPGSLYIAELKQVSWLEVTCSTDNVQIGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLGDIKPNLKPITIPKEPLVIPVDPLTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFVQKVA 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12771876 12773372 - ClCG01G009290.2 Cla01g00923 264512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g00923 185 Pfam Phloem protein 2 34 180 IPR025886 -
Cla01g00923 185 PANTHER - 21 181 - -
Cla01g00923 185 PANTHER PROTEIN PHLOEM PROTEIN 2-LIKE A9 21 181 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00918 Cla-Chr1:12479644 Cla01g00923 Cla-Chr1:12771876 2.54E-53 dispersed
Cla01g00923 Cla-Chr1:12771876 Cla01g02519 Cla-Chr1:38873551 4.58E-38 dispersed
Cla01g00922 Cla-Chr1:12760513 Cla01g00923 Cla-Chr1:12771876 1.39E-47 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g00923 - - csv:101222726 296.975