Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g00925 ATGGAGAGCAGCGAAGAGGAAGATGATTTCCCATCTATCGAGAGCATCATTCCGCAGTCCAAGGTTGATTCTCTCTACCAATCACACACTGAACAGGGAATTAGAAGACTGTGCTGTGAACTCATGGATTTAAAGGATGCTGTGGAGAACTTATGTGGGAATATGCAGACCAAGTATCTGGCTTTTCTAAGGATATCTGAAGAGGCTGTGGAGATGGAACATGAGTTGGTTGAGCTGCGGAAACATATTTCATCTCAAAGGATTCTAGTGCAAGATCTAATGACTGGTGTATGTCATGAGTTAGAACAGTGGAACCAATCTAATGATGGCACTGATGAAGTTAAGGATGGTGAAAAAAGTTATGACCCTCAAGATTCCTTGTTGAAATTGGAAGATGGTCACAATGTGGTATTTCTTGAGAATGTTGACATCCTTTTAGCTGAGCATAAAACCGAAGAAGCACTGGAGGCTTTAGATGCAGAAGAGAGAAATTCTCCAGAGCTCAAAGCAACTGGGGAAATTTCAGCCGAAATGTCATCGTACAAATCTGCATTCTTGAAACGCAAAGCTATGCTTGAGGAACAATTGATTGAAATTGCCGAACAACCTTTTGTAAACCTTCTTGAGCTTAGAAAGGCCTTGTCTGGTTTATTAAGACTCGGTAAAGGTTCTTTGGCTCATCAATTACTGCTCAAGTCCTTAGGATCTCGTCTTCAAAGGAGCACCTCGGCTTTTCTTCCTTCATGTGCTGCTTGCCCAAAGACGTTTTCAGCTACTTTGAGTAAGCTTGTATTTTCTGCAATTTCGTTGGCAACAAAAGAATCTGCTTCAATTTTTGGTGATGATCCCATTTACACANTCCCGCCATCAGATCCAAAGATCTTGGGCTCTAATATCAGTTGGTGTAAAACCAATTCTGGGAGTAAAATTCTCAATTCAATTCTATATTATGAGGGAAGGGGGAAGCCTATTATTTATTGGCAAAGGAAAACAGTTCCAGGGTGCACGATATCTGAAGAGGCTGTGGAGATGGAACATGAGTTGGTTGAGCTGCGGAAACATATTTCATCTCAAAGGATTCTAGTGCAAGATCTAATGACTGGTGTATGTCATGAGTTAGAACAGTGGAACCAATCTAATGATGGCACTGATGAAGTTAAGGATGGTGAAAAAAGTTATGACCCTCAAGATTCCTTGTTGAAATTGGAAGATGGTCACAATGTGGTATTTCTTGAGAATGTTGACATCCTTTTAGCTGAGCATAAAACCGAAGAAGCACTGGAGGCTTTAGATGCAGAAGAGAGAAATTCTCCAGAGCTCAAAGCAACTGGGGAAATTTCAGCCGAAATGTCATCGTACAAATCTGCATTCTTGAAACGCAAAGCTATGCTTGAGGAACAATTGATTGAAATTGCCGAACAACCTTTTGTAAACCTTCTTGAGCTTAGAAAGGCCTTGTCTGGTTTATTAAGACTCGGTAAAGGTTCTTTGGCTCATCAATTACTGCTCAAGTCCTTAGGATCTCGTCTTCAAAGGAGCACCTCGGCTTTTCTTCCTTCATGTGCTGCTTGCCCAAAGACGTTTTCAGCTACTTTGAGTAAGCTTGTATTTTCTGCAATTTCGTTGGCAACAAAAGAATCTGCTTCAATTTTTGGTGATGATCCCATTTACACAAATAGAGTTGTTCAGTGGGCTGAATGGGAAATTGAATTCTTTGTACGATTGGTGAAAGAGAATGCACCATCTTCTGAGACAGTGTCTGCTCTGCGTGCAGCTAGCATATGCATACATGCTAGTCTTAATTATTGTTCATTATTGGAAACACAAGGCTTGAAACTGTCAAAGCTACTTTTGGTGCTTTTGCGGCCTTTTATGGAAGAAGTTTTGGAGTTGAATTTCCGGAGAGCTAGGAGAGGCATTCTTGACTTGGCTGAGCCTGATGATAACTTTGTATTATCATCTCGCTTTGCGTCGTCATTGTCTCCGTTTTTGACATCCTCAGATAGTCTGCTTGTGGTTAGTGGGATGAAGTTCATGCACATTGTTGATGATATACTGGAACAGCTGACATCATCAGCGATTTTTCATTTTGGAGGCAACGTCTTAAATAGAATTTCTCAGTTATTTGATAAGTACATGGACGCCCTACGCAAAACACTACCAGGCCCCTCGGATGATGAAAATCTTACAGAATTAAAGGAGGCTACACCCTTTAGAGTTGAAACTGATTCCGAAAAGTTAGCGATTCTCGGTATAGCATTTACCATTATGGATGAACTTTTACCAGATGCTGTGATGACCATCTGGAAACGGCAGGATGAATTAGTCCAGAAGAATGCTGGAAGTTCTGTTGAACTGAAGGATTGGAAGCGTCATCTTCAAGTATCATTTGACAAGCTTAGAGATCACTTCTGCCTCCAATATGTGTTGAGTTTCATATATTCAAGAGAAGGCAAAACAAGATTAGATGCATGGATCTATATAAATGGGGATGGAGAGGATCTTCATTGGGGTTCTGATCCTCGTCCATCACTTCCATTTCAGGCACTATTTGCAAAATTGCAACAGTTGGCAACTGTTGCAGGAGATGTCTTGCTTGGGAAAGAGAAAATACAAAAGATTTTGCTTGCTAGGCTGACAGAGACCTTCCTTATCTGGTTGTCTGATGACCAGGAGTTTTGGGGCGTTTTTGAAGATGATTCAATTAATCTTCTGCCTTTTGGTTTGCAGCAGTTAATTCTTGATATGCACTTCACCGTCGAAATAGCACGTTTTGCTGGTTACCCGTCTCGTCAAATCCATCAGATTGCTTCTGCCATTATTGCTCGTGCAATCAGGACGTTTTCTGCTAGAGGCATTGATCCACAAAGAAAAACTGAACTACTATCCCTGATTAGTGCACTCCCTGAGGATGAATGGTTTGTTGAAACTGCCAAGTCTGCAATAAACAAACTGCTTGGAGTTGATGGGTCTGATGGTTCTGAGATCGATGATGATCACATTATTCTCCATGACGACAATGTCTCGGATTCAGATGATACTACATCCTCTCTTTCAACACTAGAATCCACAGAGTCTTTTGCCTCTGCAAGTATGGGAGAACTTGAGAGTCCATCCGATCTCACCGATTCTGAGAACTAG 3141 41.23 MESSEEEDDFPSIESIIPQSKVDSLYQSHTEQGIRRLCCELMDLKDAVENLCGNMQTKYLAFLRISEEAVEMEHELVELRKHISSQRILVQDLMTGVCHELEQWNQSNDGTDEVKDGEKSYDPQDSLLKLEDGHNVVFLENVDILLAEHKTEEALEALDAEERNSPELKATGEISAEMSSYKSAFLKRKAMLEEQLIEIAEQPFVNLLELRKALSGLLRLGKGSLAHQLLLKSLGSRLQRSTSAFLPSCAACPKTFSATLSKLVFSAISLATKESASIFGDDPIYTXPPSDPKILGSNISWCKTNSGSKILNSILYYEGRGKPIIYWQRKTVPGCTISEEAVEMEHELVELRKHISSQRILVQDLMTGVCHELEQWNQSNDGTDEVKDGEKSYDPQDSLLKLEDGHNVVFLENVDILLAEHKTEEALEALDAEERNSPELKATGEISAEMSSYKSAFLKRKAMLEEQLIEIAEQPFVNLLELRKALSGLLRLGKGSLAHQLLLKSLGSRLQRSTSAFLPSCAACPKTFSATLSKLVFSAISLATKESASIFGDDPIYTNRVVQWAEWEIEFFVRLVKENAPSSETVSALRAASICIHASLNYCSLLETQGLKLSKLLLVLLRPFMEEVLELNFRRARRGILDLAEPDDNFVLSSRFASSLSPFLTSSDSLLVVSGMKFMHIVDDILEQLTSSAIFHFGGNVLNRISQLFDKYMDALRKTLPGPSDDENLTELKEATPFRVETDSEKLAILGIAFTIMDELLPDAVMTIWKRQDELVQKNAGSSVELKDWKRHLQVSFDKLRDHFCLQYVLSFIYSREGKTRLDAWIYINGDGEDLHWGSDPRPSLPFQALFAKLQQLATVAGDVLLGKEKIQKILLARLTETFLIWLSDDQEFWGVFEDDSINLLPFGLQQLILDMHFTVEIARFAGYPSRQIHQIASAIIARAIRTFSARGIDPQRKTELLSLISALPEDEWFVETAKSAINKLLGVDGSDGSEIDDDHIILHDDNVSDSDDTTSSLSTLESTESFASASMGELESPSDLTDSEN 1046
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12809291 12823240 - ClCG01G009310.1 Cla01g00925 264514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g00925 1046 MobiDBLite consensus disorder prediction 381 395 - -
Cla01g00925 1046 MobiDBLite consensus disorder prediction 1012 1039 - -
Cla01g00925 1046 SUPERFAMILY Cullin repeat-like 410 629 IPR016159 -
Cla01g00925 1046 MobiDBLite consensus disorder prediction 1004 1046 - -
Cla01g00925 1046 SUPERFAMILY Cullin repeat-like 138 303 IPR016159 -
Cla01g00925 1046 MobiDBLite consensus disorder prediction 376 395 - -
Cla01g00925 1046 PANTHER EXOCYST COMPLEX COMPONENT EXO84C 1 286 - -
Cla01g00925 1046 PANTHER EXOCYST COMPLEX COMPONENT EXO84C 336 1046 - -
Cla01g00925 1046 PANTHER EXOCYST COMPLEX COMPONENT 8 1 286 IPR033961 GO:0000145|GO:0006887
Cla01g00925 1046 PANTHER EXOCYST COMPLEX COMPONENT 8 336 1046 IPR033961 GO:0000145|GO:0006887
Cla01g00925 1046 Pfam Exocyst component 84 C-terminal 411 613 IPR032403 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00925 Cla-Chr1:12809291 Cla09g00137 Cla-Chr9:1413404 6.13E-29 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g00925 K19986 - csv:101222251 1180.62