Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla01g00991 ATGTTGTTGCCACACTACCGTCGTTGGATTAGCTGTGGGATCCGATTCAATTATGGAGTGTTCAAATTAGCTTTTGAGGCAAAATTTAGCCAAAATTACAACACTCCACCATTCGGGAGGGTGGTCATTTGGTTTGCCATGGATTCTAGCACGAGTGGAGACAGTTATCACACACAGGCCAAATGGAGAAAAGTGGCATATGGAGGTATGCAACCTGGGTTTGATGACAACCACACTGACGAGTCTTTTCTTGAAGATATTGTCATGAATGCCAATGTCGTCAAGAGAGATATCCTAAAGGTGATGTTGGACTCTGTTTCCATATCCGAATATCTGTGCATCGTCACTCTTGTTGGCTTGGTTTGGACATACACACTTAGATCGACTCTTGATGAGAATTCCCTCTTATTTCTTGACATTGGCCTTCTTGGTTCAGGATTTCTAATTCTTCTTTTCACTGAAGGCTCACTCTCATTGAGCCTTCTCTTGCACTATTTTCTTAATATATCCTATTTCACAACGGGGTTGTATGTCTTAGCTCCCATCTACCAAACTCTGACTAGATCCATTAGCTCAGATTCCATTTGGGCATTGGCTGTTTCACTTATTATCCTTCATCTCTTCCTACATGACTACTCAGGTTCCACTGTTAGGGCTCCTGGGGATCTTAAGAATCCAAGCTTAACCAGTTGCATTTCTTTAAATGCTTCTATCGTGGCCTCTGTTCTTATCGCTTCACGTCTGCCATCTCGACTACATGTGTTCGGCATTATGTTGTTCTCATTGCAAGTTTTCCTTTTTGCTCCACTTGTTATTTACTCTATTAAGAAGTATTCTCTTCATCTGCATCTCTTATTTTCTTTCTGTTTAATAACAGTTACCTTAGTGTATGTTTATTTCTTACACCAGTTATTTTTCATACTTTTGGCGAGTCTATTGATTTTTGTAACCGTAGTTTGTCCTTATTGGCTCATACGAATCCAGGAATTTAAGTTTGAGATCAATGGTCCCTGGGACGAGGCCAAGCTTTGTTTTGATATTAGAGATTGA 1050 40.19 MLLPHYRRWISCGIRFNYGVFKLAFEAKFSQNYNTPPFGRVVIWFAMDSSTSGDSYHTQAKWRKVAYGGMQPGFDDNHTDESFLEDIVMNANVVKRDILKVMLDSVSISEYLCIVTLVGLVWTYTLRSTLDENSLLFLDIGLLGSGFLILLFTEGSLSLSLLLHYFLNISYFTTGLYVLAPIYQTLTRSISSDSIWALAVSLIILHLFLHDYSGSTVRAPGDLKNPSLTSCISLNASIVASVLIASRLPSRLHVFGIMLFSLQVFLFAPLVIYSIKKYSLHLHLLFSFCLITVTLVYVYFLHQLFFILLASLLIFVTVVCPYWLIRIQEFKFEINGPWDEAKLCFDIRD 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14570454 14575241 - ClCG01G009960.1 Cla01g00991 264580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla01g00991 349 PANTHER PHOSPHATIDYLINOSITOL GLYCAN, CLASS C 54 348 IPR009450 GO:0006506|GO:0016021
Cla01g00991 349 PIRSF PIG-C 49 349 IPR009450 GO:0006506|GO:0016021
Cla01g00991 349 Pfam Phosphatidylinositol N-acetylglucosaminyltransferase 62 339 IPR009450 GO:0006506|GO:0016021
Cla01g00991 349 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT C 54 348 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00839 Cla-Chr1:10171567 Cla01g00991 Cla-Chr1:14570454 3.19E-11 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla01g00991 K03859 - csv:101221254 538.11